RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 PTPRFP10586 1907 aa13.65□□□□□ -0.22
DDX41-219ENST00000629036 MYH1P12882 1939 aa13.65□□□□□ -0.22
DDX41-219ENST00000629036 FAM155AB1AL88 458 aaPredicted RBP13.65□□□□□ -0.22
DDX41-219ENST00000629036 CYP2E1P05181 493 aaPredicted RBP13.65□□□□□ -0.22
DDX41-219ENST00000629036 LDHBP07195 334 aaKnown RBP13.65□□□□□ -0.22
DDX41-219ENST00000629036 UQCRFS1P1P0C7P4 283 aa13.65□□□□□ -0.22
DDX41-219ENST00000629036 HSP90AB4PQ58FF6 505 aa13.65□□□□□ -0.22
DDX41-219ENST00000629036 TBC1D9Q6ZT07 1266 aa13.65□□□□□ -0.22
DDX41-219ENST00000629036 MOB2Q70IA6 237 aa13.65□□□□□ -0.22
DDX41-219ENST00000629036 AACSQ86V21 672 aa13.65□□□□□ -0.22
DDX41-219ENST00000629036 DCTPP1Q9H773 170 aa13.65□□□□□ -0.22
DDX41-219ENST00000629036 NAV1Q8NEY1 1877 aa13.64□□□□□ -0.23
DDX41-219ENST00000629036 ATRNL1Q5VV63 1379 aa13.64□□□□□ -0.23
DDX41-219ENST00000629036 RAB11FIP3O75154 756 aa13.64□□□□□ -0.23
DDX41-219ENST00000629036 CACNB3P54284 484 aa13.64□□□□□ -0.23
DDX41-219ENST00000629036 MECOMQ03112 1051 aa13.64□□□□□ -0.23
DDX41-219ENST00000629036 NSUN4Q96CB9 384 aaKnown RBP13.64□□□□□ -0.23
DDX41-219ENST00000629036 FAM163AQ96GL9 167 aaPredicted RBP13.64□□□□□ -0.23
DDX41-219ENST00000629036 PIH1D3Q9NQM4 214 aaKnown RBP13.64□□□□□ -0.23
DDX41-219ENST00000629036 PPP2R3BQ9Y5P8 575 aa13.64□□□□□ -0.23
DDX41-219ENST00000629036 DOCK1Q14185 1865 aa13.63□□□□□ -0.23
DDX41-219ENST00000629036 ZAP70P43403 619 aa13.63□□□□□ -0.23
DDX41-219ENST00000629036 RBM5P52756 815 aaKnown RBP eCLIP13.63□□□□□ -0.23
DDX41-219ENST00000629036 RHBDL3P58872 404 aa13.63□□□□□ -0.23
DDX41-219ENST00000629036 RASA3Q14644 834 aa13.63□□□□□ -0.23
DDX41-219ENST00000629036 NBPF12Q5TAG4 269 aaPredicted RBP13.63□□□□□ -0.23
DDX41-219ENST00000629036 FKBP1CQ5VVH2 108 aa13.63□□□□□ -0.23
DDX41-219ENST00000629036 CDC42EP5Q6NZY7 148 aa13.63□□□□□ -0.23
DDX41-219ENST00000629036 ZGPATQ8N5A5 531 aaKnown RBP13.63□□□□□ -0.23
DDX41-219ENST00000629036 VEZTQ9HBM0 779 aa13.63□□□□□ -0.23
DDX41-219ENST00000629036 SNRKQ9NRH2 765 aa13.63□□□□□ -0.23
DDX41-219ENST00000629036 FZD1Q9UP38 647 aa13.63□□□□□ -0.23
DDX41-219ENST00000629036 NDUFB9Q9Y6M9 179 aa13.63□□□□□ -0.23
DDX41-219ENST00000629036 MROH7-TTC4A0A0A0MT08 1334 aa13.63□□□□□ -0.23
DDX41-219ENST00000629036 APBB1O00213 710 aa13.62□□□□□ -0.23
DDX41-219ENST00000629036 SMARCA5O60264 1052 aaPredicted RBP13.62□□□□□ -0.23
DDX41-219ENST00000629036 HUNKP57058 714 aa13.62□□□□□ -0.23
DDX41-219ENST00000629036 FKBP1BP68106 108 aa13.62□□□□□ -0.23
DDX41-219ENST00000629036 NFIAQ12857 509 aa13.62□□□□□ -0.23
DDX41-219ENST00000629036 MAP3K11Q16584 847 aa13.62□□□□□ -0.23
DDX41-219ENST00000629036 TTC39AQ5SRH9 613 aa13.62□□□□□ -0.23
DDX41-219ENST00000629036 GORABQ5T7V8 394 aa13.62□□□□□ -0.23
DDX41-219ENST00000629036 ADGRA1Q86SQ6 560 aa13.62□□□□□ -0.23
DDX41-219ENST00000629036 TMEM39BQ9GZU3 492 aa13.62□□□□□ -0.23
DDX41-219ENST00000629036 FAM198AQ9UFP1 575 aa13.62□□□□□ -0.23
DDX41-219ENST00000629036 GPR75-ASB3A0A0A6YYF3 556 aa13.61□□□□□ -0.23
DDX41-219ENST00000629036 TCP10L2B9ZVM9 353 aa13.61□□□□□ -0.23
DDX41-219ENST00000629036 MYO1BO43795 1136 aa13.61□□□□□ -0.23
DDX41-219ENST00000629036 WDHD1O75717 1129 aaPredicted RBP13.61□□□□□ -0.23
DDX41-219ENST00000629036 NOGQ13253 232 aa13.61□□□□□ -0.23
DDX41-219ENST00000629036 CCDC158Q5M9N0 1113 aa13.61□□□□□ -0.23
DDX41-219ENST00000629036 LDLRAD1Q5T700 205 aa13.61□□□□□ -0.23
DDX41-219ENST00000629036 FAM83AQ86UY5 434 aa13.61□□□□□ -0.23
DDX41-219ENST00000629036 RASAL3Q86YV0 1011 aa13.61□□□□□ -0.23
DDX41-219ENST00000629036 EXOC6Q8TAG9 804 aa13.61□□□□□ -0.23
DDX41-219ENST00000629036 ANTXR1Q9H6X2 564 aa13.61□□□□□ -0.23
DDX41-219ENST00000629036 ABCF2Q9UG63 623 aa13.61□□□□□ -0.23
DDX41-219ENST00000629036 SUPT16HQ9Y5B9 1047 aaKnown RBP13.61□□□□□ -0.23
DDX41-219ENST00000629036 SALL3Q9BXA9 1300 aa13.61□□□□□ -0.23
DDX41-219ENST00000629036 COL2A1P02458 1487 aaPredicted RBP13.61□□□□□ -0.23
DDX41-219ENST00000629036 BAZ2AQ9UIF9 1905 aaKnown RBP13.6□□□□□ -0.23
DDX41-219ENST00000629036 SLC10A3P09131 477 aa13.6□□□□□ -0.23
DDX41-219ENST00000629036 HDAC1Q13547 482 aaPredicted RBP13.6□□□□□ -0.23
DDX41-219ENST00000629036 ERICH6Q7L0X2 663 aa13.6□□□□□ -0.23
DDX41-219ENST00000629036 CLASRPQ8N2M8 674 aaKnown RBP13.6□□□□□ -0.23
DDX41-219ENST00000629036 C2orf69Q8N8R5 385 aa13.6□□□□□ -0.23
DDX41-219ENST00000629036 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.6□□□□□ -0.23
DDX41-219ENST00000629036 LRRCC1Q9C099 1032 aa13.6□□□□□ -0.23
DDX41-219ENST00000629036 DDX4Q9NQI0 724 aaKnown RBP13.6□□□□□ -0.23
DDX41-219ENST00000629036 UBE2Q2LH0YL09 131 aa13.59□□□□□ -0.23
DDX41-219ENST00000629036 TRPA1O75762 1119 aa13.59□□□□□ -0.23
DDX41-219ENST00000629036 TNFAIP1Q13829 316 aa13.59□□□□□ -0.23
DDX41-219ENST00000629036 SPTY2D1Q68D10 685 aaPredicted RBP13.59□□□□□ -0.23
DDX41-219ENST00000629036 RGMBQ6NW40 437 aa13.59□□□□□ -0.23
DDX41-219ENST00000629036 SH3BP5LQ7L8J4 393 aa13.59□□□□□ -0.23
DDX41-219ENST00000629036 DZIP1Q86YF9 867 aaKnown RBP13.59□□□□□ -0.23
DDX41-219ENST00000629036 ZFPM1Q8IX07 1006 aa13.59□□□□□ -0.23
DDX41-219ENST00000629036 IDI2Q9BXS1 227 aa13.59□□□□□ -0.23
DDX41-219ENST00000629036 HTTP42858 3142 aa13.59□□□□□ -0.23
DDX41-219ENST00000629036 USP2O75604 605 aaPredicted RBP13.58□□□□□ -0.24
DDX41-219ENST00000629036 BTDP43251 543 aa13.58□□□□□ -0.24
DDX41-219ENST00000629036 EDC3Q96F86 508 aaKnown RBP13.58□□□□□ -0.24
DDX41-219ENST00000629036 MYH8P13535 1937 aa13.57□□□□□ -0.24
DDX41-219ENST00000629036 IGSF3O75054 1194 aa13.57□□□□□ -0.24
DDX41-219ENST00000629036 ATP5JP18859 108 aa13.57□□□□□ -0.24
DDX41-219ENST00000629036 KIF23Q02241 960 aaPredicted RBP13.57□□□□□ -0.24
DDX41-219ENST00000629036 AAMPQ13685 434 aa13.57□□□□□ -0.24
DDX41-219ENST00000629036 OTUD7AQ8TE49 926 aaPredicted RBP13.57□□□□□ -0.24
DDX41-219ENST00000629036 FAM151AQ8WW52 585 aa13.57□□□□□ -0.24
DDX41-219ENST00000629036 CLMNQ96JQ2 1002 aa13.57□□□□□ -0.24
DDX41-219ENST00000629036 USP40Q9NVE5 1235 aa13.57□□□□□ -0.24
DDX41-219ENST00000629036 TCRBV5S4A2TA0A5A2 114 aa13.56□□□□□ -0.24
DDX41-219ENST00000629036 NPM3O75607 178 aaKnown RBP13.56□□□□□ -0.24
DDX41-219ENST00000629036 IFIT2P09913 472 aaKnown RBP13.56□□□□□ -0.24
DDX41-219ENST00000629036 GJA5P36382 358 aa13.56□□□□□ -0.24
DDX41-219ENST00000629036 RGS3P49796 1198 aa13.56□□□□□ -0.24
DDX41-219ENST00000629036 PPP4CP60510 307 aa13.56□□□□□ -0.24
DDX41-219ENST00000629036 PRKG1Q13976 671 aa13.56□□□□□ -0.24
DDX41-219ENST00000629036 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.56□□□□□ -0.24
DDX41-219ENST00000629036 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms