RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 PKN1Q16512 942 aa6.36□□□□□ -1.39
VPS8-228ENST00000628962 PBXIP1Q96AQ6 731 aa6.36□□□□□ -1.39
VPS8-228ENST00000628962 CORO1BQ9BR76 489 aa6.36□□□□□ -1.39
VPS8-228ENST00000628962 WDR18Q9BV38 432 aa6.36□□□□□ -1.39
VPS8-228ENST00000628962 B3GALT4O96024 378 aa6.35□□□□□ -1.39
VPS8-228ENST00000628962 POLR3DP05423 398 aaPredicted RBP6.35□□□□□ -1.39
VPS8-228ENST00000628962 KSR1Q8IVT5 923 aa6.35□□□□□ -1.39
VPS8-228ENST00000628962 LGR6Q9HBX8 967 aa6.35□□□□□ -1.39
VPS8-228ENST00000628962 VAV3Q9UKW4 847 aa6.35□□□□□ -1.39
VPS8-228ENST00000628962 PPP1R9AQ9ULJ8 1098 aa6.35□□□□□ -1.39
VPS8-228ENST00000628962 FZD6O60353 706 aa6.34□□□□□ -1.39
VPS8-228ENST00000628962 PRKCQQ04759 706 aa6.34□□□□□ -1.39
VPS8-228ENST00000628962 MESP2Q0VG99 397 aa6.34□□□□□ -1.39
VPS8-228ENST00000628962 KRTAP19-4Q3LI73 84 aa6.34□□□□□ -1.39
VPS8-228ENST00000628962 GALNT12Q8IXK2 581 aa6.34□□□□□ -1.39
VPS8-228ENST00000628962 GJD3Q8N144 294 aa6.34□□□□□ -1.39
VPS8-228ENST00000628962 LRRN4CLQ8ND94 238 aa6.34□□□□□ -1.39
VPS8-228ENST00000628962 LIN7BQ9HAP6 207 aa6.34□□□□□ -1.39
VPS8-228ENST00000628962 U3KQE9 123 aa6.34□□□□□ -1.39
VPS8-228ENST00000628962 FAM87AP0C7U9 286 aa6.33□□□□□ -1.4
VPS8-228ENST00000628962 CD96P40200 585 aa6.33□□□□□ -1.4
VPS8-228ENST00000628962 AAMPQ13685 434 aa6.33□□□□□ -1.4
VPS8-228ENST00000628962 CILP2Q8IUL8 1156 aa6.33□□□□□ -1.4
VPS8-228ENST00000628962 FAM181AQ8N9Y4 354 aa6.33□□□□□ -1.4
VPS8-228ENST00000628962 BHLHE22Q8NFJ8 381 aaPredicted RBP6.33□□□□□ -1.4
VPS8-228ENST00000628962 PI4K2BQ8TCG2 481 aa6.33□□□□□ -1.4
VPS8-228ENST00000628962 DDX54Q8TDD1 881 aaKnown RBP6.33□□□□□ -1.4
VPS8-228ENST00000628962 SLC38A3Q99624 504 aa6.33□□□□□ -1.4
VPS8-228ENST00000628962 TMPRSS2O15393 492 aa6.32□□□□□ -1.4
VPS8-228ENST00000628962 FAM13AO94988 1023 aa6.32□□□□□ -1.4
VPS8-228ENST00000628962 CDK5R2Q13319 367 aa6.32□□□□□ -1.4
VPS8-228ENST00000628962 ZNF576Q9H609 170 aa6.32□□□□□ -1.4
VPS8-228ENST00000628962 MKNK2Q9HBH9 465 aa6.32□□□□□ -1.4
VPS8-228ENST00000628962 ITPKAP23677 461 aa6.31□□□□□ -1.4
VPS8-228ENST00000628962 PDE3AQ14432 1141 aa6.31□□□□□ -1.4
VPS8-228ENST00000628962 IFI16Q16666 785 aaKnown RBP6.31□□□□□ -1.4
VPS8-228ENST00000628962 FAM84AQ96KN4 292 aa6.31□□□□□ -1.4
VPS8-228ENST00000628962 CCDC87Q9NVE4 849 aa6.31□□□□□ -1.4
VPS8-228ENST00000628962 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.31□□□□□ -1.4
VPS8-228ENST00000628962 CRIM1Q9NZV1 1036 aa6.31□□□□□ -1.4
VPS8-228ENST00000628962 SSFA2P28290 1259 aa6.3□□□□□ -1.4
VPS8-228ENST00000628962 OXCT1P55809 520 aa6.3□□□□□ -1.4
VPS8-228ENST00000628962 KIAA0319Q5VV43 1072 aa6.3□□□□□ -1.4
VPS8-228ENST00000628962 FLAD1Q8NFF5 587 aa6.3□□□□□ -1.4
VPS8-228ENST00000628962 FANCD2OSQ96PS1 177 aa6.3□□□□□ -1.4
VPS8-228ENST00000628962 KRTAP4-5Q9BYR2 181 aa6.3□□□□□ -1.4
VPS8-228ENST00000628962 CEACAM5P06731 702 aa6.29□□□□□ -1.4
VPS8-228ENST00000628962 AP3B2Q13367 1082 aa6.29□□□□□ -1.4
VPS8-228ENST00000628962 AOC3Q16853 763 aa6.29□□□□□ -1.4
VPS8-228ENST00000628962 CCER1Q8TC90 406 aaPredicted RBP6.29□□□□□ -1.4
VPS8-228ENST00000628962 WDR89Q96FK6 387 aaPredicted RBP6.29□□□□□ -1.4
VPS8-228ENST00000628962 HRASLS5Q96KN8 279 aa6.29□□□□□ -1.4
VPS8-228ENST00000628962 PLAGL2Q9UPG8 496 aa6.29□□□□□ -1.4
VPS8-228ENST00000628962 LEFTY1O75610 366 aa6.28□□□□□ -1.4
VPS8-228ENST00000628962 LIG1P18858 919 aa6.28□□□□□ -1.4
VPS8-228ENST00000628962 SLC23A3Q6PIS1 610 aa6.28□□□□□ -1.4
VPS8-228ENST00000628962 SMYD4Q8IYR2 804 aaPredicted RBP6.28□□□□□ -1.4
VPS8-228ENST00000628962 ATXN3LQ9H3M9 355 aa6.28□□□□□ -1.4
VPS8-228ENST00000628962 PIDD1Q9HB75 910 aa6.28□□□□□ -1.4
VPS8-228ENST00000628962 PCDHGC5Q9Y5F6 944 aa6.28□□□□□ -1.4
VPS8-228ENST00000628962 TMEM265A0A087WTH1 108 aa6.27□□□□□ -1.41
VPS8-228ENST00000628962 ZNF503-AS2A6NEH8 195 aa6.27□□□□□ -1.41
VPS8-228ENST00000628962 LRRC10BA6NIK2 292 aa6.27□□□□□ -1.41
VPS8-228ENST00000628962 ID3Q02535 119 aa6.27□□□□□ -1.41
VPS8-228ENST00000628962 PTPN12Q05209 780 aaKnown RBP6.27□□□□□ -1.41
VPS8-228ENST00000628962 SF3B2Q13435 895 aaKnown RBP6.27□□□□□ -1.41
VPS8-228ENST00000628962 ANGEL2Q5VTE6 544 aaKnown RBP6.27□□□□□ -1.41
VPS8-228ENST00000628962 USPL1Q5W0Q7 1092 aa6.27□□□□□ -1.41
VPS8-228ENST00000628962 ZSWIM9Q86XI8 627 aa6.27□□□□□ -1.41
VPS8-228ENST00000628962 DUSP23Q9BVJ7 150 aa6.27□□□□□ -1.41
VPS8-228ENST00000628962 TNKS2Q9H2K2 1166 aa6.27□□□□□ -1.41
VPS8-228ENST00000628962 CCDC86Q9H6F5 360 aaKnown RBP6.27□□□□□ -1.41
VPS8-228ENST00000628962 DISC1Q9NRI5 854 aa6.27□□□□□ -1.41
VPS8-228ENST00000628962 FAM53CQ9NYF3 392 aa6.27□□□□□ -1.41
VPS8-228ENST00000628962 ZNF865P0CJ78 1059 aaPredicted RBP6.26□□□□□ -1.41
VPS8-228ENST00000628962 FKBP4Q02790 459 aaKnown RBP eCLIP6.26□□□□□ -1.41
VPS8-228ENST00000628962 LCE5AQ5TCM9 118 aa6.26□□□□□ -1.41
VPS8-228ENST00000628962 C1QL4Q86Z23 238 aa6.26□□□□□ -1.41
VPS8-228ENST00000628962 TIMELESSQ9UNS1 1208 aa6.26□□□□□ -1.41
VPS8-228ENST00000628962 TMEM88BA6NKF7 163 aa6.25□□□□□ -1.41
VPS8-228ENST00000628962 ZNF862O60290 1169 aa6.25□□□□□ -1.41
VPS8-228ENST00000628962 SLFN14P0C7P3 912 aa6.25□□□□□ -1.41
VPS8-228ENST00000628962 CFPP27918 469 aa6.25□□□□□ -1.41
VPS8-228ENST00000628962 TTLL4Q14679 1199 aa6.25□□□□□ -1.41
VPS8-228ENST00000628962 KIF4BQ2VIQ3 1234 aa6.25□□□□□ -1.41
VPS8-228ENST00000628962 TOX2Q96NM4 488 aa6.25□□□□□ -1.41
VPS8-228ENST00000628962 ABCB6Q9NP58 842 aa6.25□□□□□ -1.41
VPS8-228ENST00000628962 GTF3C3Q9Y5Q9 886 aa6.25□□□□□ -1.41
VPS8-228ENST00000628962 SNX11Q9Y5W9 270 aa6.25□□□□□ -1.41
VPS8-228ENST00000628962 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.24□□□□□ -1.41
VPS8-228ENST00000628962 TSPAN15O95858 294 aa6.24□□□□□ -1.41
VPS8-228ENST00000628962 MLANAQ16655 118 aa6.24□□□□□ -1.41
VPS8-228ENST00000628962 RPS26P11Q5JNZ5 115 aaPredicted RBP6.24□□□□□ -1.41
VPS8-228ENST00000628962 ARHGAP27Q6ZUM4 889 aa6.24□□□□□ -1.41
VPS8-228ENST00000628962 EHD4Q9H223 541 aa6.24□□□□□ -1.41
VPS8-228ENST00000628962 PRDM7Q9NQW5 492 aa6.24□□□□□ -1.41
VPS8-228ENST00000628962 KRT82Q9NSB4 513 aa6.24□□□□□ -1.41
VPS8-228ENST00000628962 PCOLCE2Q9UKZ9 415 aa6.24□□□□□ -1.41
VPS8-228ENST00000628962 HCLS1P14317 486 aaPredicted RBP6.23□□□□□ -1.41
VPS8-228ENST00000628962 RAP1GAPP47736 663 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms