RNA–Protein interactions for RNA: ENST00000628597.1

SCARNA4.1-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 123 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4.1-201ENST00000628597 NTRK1P04629 796 aa4.27□□□□□ -1.73
SCARNA4.1-201ENST00000628597 RAG1P15918 1043 aa4.27□□□□□ -1.73
SCARNA4.1-201ENST00000628597 KCNA5P22460 613 aa4.27□□□□□ -1.73
SCARNA4.1-201ENST00000628597 TNNT2P45379 298 aaPredicted RBP4.27□□□□□ -1.73
SCARNA4.1-201ENST00000628597 VCPP55072 806 aaKnown RBP4.27□□□□□ -1.73
SCARNA4.1-201ENST00000628597 DOK7Q18PE1 504 aa4.27□□□□□ -1.73
SCARNA4.1-201ENST00000628597 PLEKHO1Q53GL0 409 aaPredicted RBP4.27□□□□□ -1.73
SCARNA4.1-201ENST00000628597 HERC4Q5GLZ8 1057 aaPredicted RBP4.27□□□□□ -1.73
SCARNA4.1-201ENST00000628597 C1orf141Q5JVX7 400 aa4.27□□□□□ -1.73
SCARNA4.1-201ENST00000628597 RSBN1LQ6PCB5 846 aaPredicted RBP4.27□□□□□ -1.73
SCARNA4.1-201ENST00000628597 VSIG10Q8N0Z9 540 aa4.27□□□□□ -1.73
SCARNA4.1-201ENST00000628597 TMC1Q8TDI8 760 aa4.27□□□□□ -1.73
SCARNA4.1-201ENST00000628597 DCAF11Q8TEB1 546 aa4.27□□□□□ -1.73
SCARNA4.1-201ENST00000628597 ZNF496Q96IT1 587 aaPredicted RBP4.27□□□□□ -1.73
SCARNA4.1-201ENST00000628597 STAC3Q96MF2 364 aa4.27□□□□□ -1.73
SCARNA4.1-201ENST00000628597 EYA3Q99504 573 aa4.27□□□□□ -1.73
SCARNA4.1-201ENST00000628597 DEFB129Q9H1M3 183 aa4.27□□□□□ -1.73
SCARNA4.1-201ENST00000628597 KCNQ5Q9NR82 932 aa4.27□□□□□ -1.73
SCARNA4.1-201ENST00000628597 PRKAG3Q9UGI9 489 aa4.27□□□□□ -1.73
SCARNA4.1-201ENST00000628597 ZMIZ1Q9ULJ6 1067 aa4.27□□□□□ -1.73
SCARNA4.1-201ENST00000628597 CSADQ9Y600 493 aa4.27□□□□□ -1.73
SCARNA4.1-201ENST00000628597 TACC3Q9Y6A5 838 aa4.27□□□□□ -1.73
SCARNA4.1-201ENST00000628597 ARFGEF2Q9Y6D5 1785 aa4.27□□□□□ -1.73
SCARNA4.1-201ENST00000628597 RTL1A6NKG5 1358 aa4.27□□□□□ -1.73
SCARNA4.1-201ENST00000628597 COL5A3P25940 1745 aaPredicted RBP4.26□□□□□ -1.73
SCARNA4.1-201ENST00000628597 COL3A1P02461 1466 aaPredicted RBP4.26□□□□□ -1.73
SCARNA4.1-201ENST00000628597 DCDC2BA2VCK2 349 aa4.26□□□□□ -1.73
SCARNA4.1-201ENST00000628597 GRXCR2A6NFK2 248 aa4.26□□□□□ -1.73
SCARNA4.1-201ENST00000628597 WNT10BO00744 389 aa4.26□□□□□ -1.73
SCARNA4.1-201ENST00000628597 USP2O75604 605 aaPredicted RBP4.26□□□□□ -1.73
SCARNA4.1-201ENST00000628597 EPHB4P54760 987 aa4.26□□□□□ -1.73
SCARNA4.1-201ENST00000628597 RING1Q06587 406 aa4.26□□□□□ -1.73
SCARNA4.1-201ENST00000628597 SNAPC2Q13487 334 aa4.26□□□□□ -1.73
SCARNA4.1-201ENST00000628597 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.26□□□□□ -1.73
SCARNA4.1-201ENST00000628597 PARK7Q99497 189 aaKnown RBP4.26□□□□□ -1.73
SCARNA4.1-201ENST00000628597 TEX13AQ9BXU3 409 aaPredicted RBP4.26□□□□□ -1.73
SCARNA4.1-201ENST00000628597 MTIF3Q9H2K0 278 aaKnown RBP4.26□□□□□ -1.73
SCARNA4.1-201ENST00000628597 SEMA4AQ9H3S1 761 aa4.26□□□□□ -1.73
SCARNA4.1-201ENST00000628597 UBE2ZQ9H832 354 aaPredicted RBP4.26□□□□□ -1.73
SCARNA4.1-201ENST00000628597 CDV3Q9UKY7 258 aaKnown RBP4.26□□□□□ -1.73
SCARNA4.1-201ENST00000628597 NCAPD2Q15021 1401 aa4.26□□□□□ -1.73
SCARNA4.1-201ENST00000628597 FLT4P35916 1363 aa4.26□□□□□ -1.73
SCARNA4.1-201ENST00000628597 CDH23Q9H251 3354 aa4.25□□□□□ -1.73
SCARNA4.1-201ENST00000628597 CEP250Q9BV73 2442 aa4.25□□□□□ -1.73
SCARNA4.1-201ENST00000628597 MYBBP1AQ9BQG0 1328 aaKnown RBP4.25□□□□□ -1.73
SCARNA4.1-201ENST00000628597 TRIM43BA6NCK2 446 aa4.25□□□□□ -1.73
SCARNA4.1-201ENST00000628597 LRRC37A2A6NM11 1700 aa4.25□□□□□ -1.73
SCARNA4.1-201ENST00000628597 PDHXO00330 501 aa4.25□□□□□ -1.73
SCARNA4.1-201ENST00000628597 ARHGAP6O43182 974 aa4.25□□□□□ -1.73
SCARNA4.1-201ENST00000628597 ANKRD17O75179 2603 aaKnown RBP4.25□□□□□ -1.73
SCARNA4.1-201ENST00000628597 SLC5A1P13866 664 aa4.25□□□□□ -1.73
SCARNA4.1-201ENST00000628597 RIPPLY3P57055 190 aa4.25□□□□□ -1.73
SCARNA4.1-201ENST00000628597 MKRN4PQ13434 485 aaPredicted RBP4.25□□□□□ -1.73
SCARNA4.1-201ENST00000628597 LARP1BQ659C4 914 aaKnown RBP4.25□□□□□ -1.73
SCARNA4.1-201ENST00000628597 ZNF530Q6P9A1 599 aaPredicted RBP4.25□□□□□ -1.73
SCARNA4.1-201ENST00000628597 TRIM43Q96BQ3 446 aaPredicted RBP4.25□□□□□ -1.73
SCARNA4.1-201ENST00000628597 NLRP3Q96P20 1036 aa4.25□□□□□ -1.73
SCARNA4.1-201ENST00000628597 POP1Q99575 1024 aaKnown RBP4.25□□□□□ -1.73
SCARNA4.1-201ENST00000628597 RTKNQ9BST9 563 aa4.25□□□□□ -1.73
SCARNA4.1-201ENST00000628597 ZC3H12CQ9C0D7 883 aaKnown RBP4.25□□□□□ -1.73
SCARNA4.1-201ENST00000628597 ALG13Q9NP73 1137 aaKnown RBP4.25□□□□□ -1.73
SCARNA4.1-201ENST00000628597 PDLIM7Q9NR12 457 aa4.25□□□□□ -1.73
SCARNA4.1-201ENST00000628597 NSFL1CQ9UNZ2 370 aaKnown RBP4.25□□□□□ -1.73
SCARNA4.1-201ENST00000628597 PPP2R3BQ9Y5P8 575 aa4.25□□□□□ -1.73
SCARNA4.1-201ENST00000628597 RTL9Q8NET4 1388 aa4.25□□□□□ -1.73
SCARNA4.1-201ENST00000628597 PRRC2BQ5JSZ5 2229 aaKnown RBP4.24□□□□□ -1.73
SCARNA4.1-201ENST00000628597 PRR5-ARHGAP8B1AHC4 643 aa4.24□□□□□ -1.73
SCARNA4.1-201ENST00000628597 RFXAPO00287 272 aa4.24□□□□□ -1.73
SCARNA4.1-201ENST00000628597 PRKAR2AP13861 404 aaKnown RBP4.24□□□□□ -1.73
SCARNA4.1-201ENST00000628597 RBM25P49756 843 aaKnown RBP4.24□□□□□ -1.73
SCARNA4.1-201ENST00000628597 MAP3K9P80192 1104 aa4.24□□□□□ -1.73
SCARNA4.1-201ENST00000628597 ARHGAP8P85298 464 aa4.24□□□□□ -1.73
SCARNA4.1-201ENST00000628597 ZP2Q05996 745 aa4.24□□□□□ -1.73
SCARNA4.1-201ENST00000628597 C19orf57Q0VDD7 668 aa4.24□□□□□ -1.73
SCARNA4.1-201ENST00000628597 SLC39A6Q13433 755 aa4.24□□□□□ -1.73
SCARNA4.1-201ENST00000628597 SOWAHCQ53LP3 525 aaPredicted RBP4.24□□□□□ -1.73
SCARNA4.1-201ENST00000628597 SLC39A5Q6ZMH5 540 aa4.24□□□□□ -1.73
SCARNA4.1-201ENST00000628597 SH3RF1Q7Z6J0 888 aa4.24□□□□□ -1.73
SCARNA4.1-201ENST00000628597 ANKRD23Q86SG2 305 aa4.24□□□□□ -1.73
SCARNA4.1-201ENST00000628597 RNF135Q8IUD6 432 aa4.24□□□□□ -1.73
SCARNA4.1-201ENST00000628597 ADHFE1Q8IWW8 467 aa4.24□□□□□ -1.73
SCARNA4.1-201ENST00000628597 TTC5Q8N0Z6 440 aa4.24□□□□□ -1.73
SCARNA4.1-201ENST00000628597 RUBCNQ92622 972 aa4.24□□□□□ -1.73
SCARNA4.1-201ENST00000628597 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.24□□□□□ -1.73
SCARNA4.1-201ENST00000628597 TERF2IPQ9NYB0 399 aa4.24□□□□□ -1.73
SCARNA4.1-201ENST00000628597 DCHS1Q96JQ0 3298 aa4.24□□□□□ -1.73
SCARNA4.1-201ENST00000628597 HELZ2Q9BYK8 2649 aaKnown RBP4.24□□□□□ -1.73
SCARNA4.1-201ENST00000628597 SPTA1P02549 2419 aa4.23□□□□□ -1.73
SCARNA4.1-201ENST00000628597 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.23□□□□□ -1.73
SCARNA4.1-201ENST00000628597 C19orf67A6NJJ6 358 aa4.23□□□□□ -1.73
SCARNA4.1-201ENST00000628597 ENO4A6NNW6 628 aa4.23□□□□□ -1.73
SCARNA4.1-201ENST00000628597 APBB1O00213 710 aa4.23□□□□□ -1.73
SCARNA4.1-201ENST00000628597 SASH1O94885 1247 aa4.23□□□□□ -1.73
SCARNA4.1-201ENST00000628597 BCRP11274 1271 aa4.23□□□□□ -1.73
SCARNA4.1-201ENST00000628597 MMP14P50281 582 aa4.23□□□□□ -1.73
SCARNA4.1-201ENST00000628597 ZXDAP98168 799 aa4.23□□□□□ -1.73
SCARNA4.1-201ENST00000628597 TRIM32Q13049 653 aa4.23□□□□□ -1.73
SCARNA4.1-201ENST00000628597 MAP2K5Q13163 448 aa4.23□□□□□ -1.73
SCARNA4.1-201ENST00000628597 PPIGQ13427 754 aaKnown RBP eCLIP4.23□□□□□ -1.73
SCARNA4.1-201ENST00000628597 TRIM60Q495X7 471 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms