RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 IRS2Q9Y4H2 1338 aa23.06■■□□□ 1.28
CHRNA4-209ENST00000627000 SERPINB2P05120 415 aa23.06■■□□□ 1.28
CHRNA4-209ENST00000627000 GUCY1B3Q02153 619 aa23.06■■□□□ 1.28
CHRNA4-209ENST00000627000 CHAF1AQ13111 956 aaPredicted RBP23.06■■□□□ 1.28
CHRNA4-209ENST00000627000 AKNAD1Q5T1N1 836 aa23.06■■□□□ 1.28
CHRNA4-209ENST00000627000 NAA16Q6N069 864 aaPredicted RBP23.06■■□□□ 1.28
CHRNA4-209ENST00000627000 JAG2Q9Y219 1238 aa23.06■■□□□ 1.28
CHRNA4-209ENST00000627000 SEMA3EO15041 775 aa23.05■■□□□ 1.28
CHRNA4-209ENST00000627000 KDM4AO75164 1064 aa23.05■■□□□ 1.28
CHRNA4-209ENST00000627000 IGDCC4Q8TDY8 1250 aa23.05■■□□□ 1.28
CHRNA4-209ENST00000627000 ZSWIM5Q9P217 1185 aa23.05■■□□□ 1.28
CHRNA4-209ENST00000627000 RXRAP19793 462 aa23.04■■□□□ 1.28
CHRNA4-209ENST00000627000 NASPP49321 788 aaPredicted RBP23.04■■□□□ 1.28
CHRNA4-209ENST00000627000 TXNRD1Q16881 649 aa23.04■■□□□ 1.28
CHRNA4-209ENST00000627000 ANKIB1Q9P2G1 1089 aa23.04■■□□□ 1.28
CHRNA4-209ENST00000627000 KIF3AQ9Y496 699 aa23.04■■□□□ 1.28
CHRNA4-209ENST00000627000 SMIM22K7EJ46 135 aa23.04■■□□□ 1.28
CHRNA4-209ENST00000627000 RRP12Q5JTH9 1297 aaKnown RBP23.03■■□□□ 1.28
CHRNA4-209ENST00000627000 MFSD6Q6ZSS7 791 aa23.03■■□□□ 1.28
CHRNA4-209ENST00000627000 NSUN4Q96CB9 384 aaKnown RBP23.03■■□□□ 1.28
CHRNA4-209ENST00000627000 CHMP4CQ96CF2 233 aa23.03■■□□□ 1.28
CHRNA4-209ENST00000627000 ZSCAN16Q9H4T2 348 aaPredicted RBP23.03■■□□□ 1.28
CHRNA4-209ENST00000627000 MYH15Q9Y2K3 1946 aa23.03■■□□□ 1.28
CHRNA4-209ENST00000627000 PRDX5P30044 214 aa23.03■■□□□ 1.28
CHRNA4-209ENST00000627000 DDR1Q08345 913 aa23.03■■□□□ 1.28
CHRNA4-209ENST00000627000 LEO1Q8WVC0 666 aaPredicted RBP23.03■■□□□ 1.28
CHRNA4-209ENST00000627000 STAG1Q8WVM7 1258 aa23.03■■□□□ 1.28
CHRNA4-209ENST00000627000 TMEM87BQ96K49 555 aa23.03■■□□□ 1.28
CHRNA4-209ENST00000627000 LY9Q9HBG7 655 aa23.03■■□□□ 1.28
CHRNA4-209ENST00000627000 ELP1O95163 1332 aa23.02■■□□□ 1.28
CHRNA4-209ENST00000627000 MECOMQ03112 1051 aa23.02■■□□□ 1.28
CHRNA4-209ENST00000627000 TMEM67Q5HYA8 995 aa23.02■■□□□ 1.28
CHRNA4-209ENST00000627000 CCDC183Q5T5S1 534 aa23.02■■□□□ 1.28
CHRNA4-209ENST00000627000 APOA5Q6Q788 366 aa23.02■■□□□ 1.28
CHRNA4-209ENST00000627000 SPATA32Q96LK8 384 aa23.02■■□□□ 1.28
CHRNA4-209ENST00000627000 GPR101Q96P66 508 aaPredicted RBP23.02■■□□□ 1.28
CHRNA4-209ENST00000627000 TOMM22Q9NS69 142 aa23.02■■□□□ 1.28
CHRNA4-209ENST00000627000 BAZ2AQ9UIF9 1905 aaKnown RBP23.02■■□□□ 1.28
CHRNA4-209ENST00000627000 MINDY4BA8MYZ0 360 aa23.01■■□□□ 1.27
CHRNA4-209ENST00000627000 PPARAQ07869 468 aa23.01■■□□□ 1.27
CHRNA4-209ENST00000627000 OTUD7BQ6GQQ9 843 aa23.01■■□□□ 1.27
CHRNA4-209ENST00000627000 RPGRQ92834 1020 aaKnown RBP23.01■■□□□ 1.27
CHRNA4-209ENST00000627000 SCAND2PQ9GZW5 306 aaPredicted RBP23.01■■□□□ 1.27
CHRNA4-209ENST00000627000 PDS5AQ29RF7 1337 aaKnown RBP23.01■■□□□ 1.27
CHRNA4-209ENST00000627000 CPLX1O14810 134 aa23.01■■□□□ 1.27
CHRNA4-209ENST00000627000 DHX16O60231 1041 aaKnown RBP23.01■■□□□ 1.27
CHRNA4-209ENST00000627000 ADD1P35611 737 aaKnown RBP23.01■■□□□ 1.27
CHRNA4-209ENST00000627000 ST5P78524 1137 aa23.01■■□□□ 1.27
CHRNA4-209ENST00000627000 MYL10Q9BUA6 226 aa23.01■■□□□ 1.27
CHRNA4-209ENST00000627000 KRT23Q9C075 422 aa23.01■■□□□ 1.27
CHRNA4-209ENST00000627000 CNNM2Q9H8M5 875 aa23.01■■□□□ 1.27
CHRNA4-209ENST00000627000 ORC3Q9UBD5 711 aaPredicted RBP23.01■■□□□ 1.27
CHRNA4-209ENST00000627000 CRY2Q49AN0 593 aa23■■□□□ 1.27
CHRNA4-209ENST00000627000 MICU3Q86XE3 530 aa23■■□□□ 1.27
CHRNA4-209ENST00000627000 ZKSCAN3Q9BRR0 538 aa23■■□□□ 1.27
CHRNA4-209ENST00000627000 IFIT3O14879 490 aaKnown RBP23■■□□□ 1.27
CHRNA4-209ENST00000627000 METAP2P50579 478 aaKnown RBP eCLIP23■■□□□ 1.27
CHRNA4-209ENST00000627000 NFXL1Q6ZNB6 911 aa23■■□□□ 1.27
CHRNA4-209ENST00000627000 CCDC144CPQ8IYA2 1237 aa23■■□□□ 1.27
CHRNA4-209ENST00000627000 RTN4Q9NQC3 1192 aaKnown RBP23■■□□□ 1.27
CHRNA4-209ENST00000627000 CYP2D7A0A087X1C5 515 aa22.99■■□□□ 1.27
CHRNA4-209ENST00000627000 CDC27P30260 824 aa22.99■■□□□ 1.27
CHRNA4-209ENST00000627000 GJB4Q9NTQ9 266 aa22.99■■□□□ 1.27
CHRNA4-209ENST00000627000 LEMD3Q9Y2U8 911 aa22.99■■□□□ 1.27
CHRNA4-209ENST00000627000 XDHP47989 1333 aa22.99■■□□□ 1.27
CHRNA4-209ENST00000627000 POLRMTO00411 1230 aaKnown RBP22.99■■□□□ 1.27
CHRNA4-209ENST00000627000 ILDR1Q86SU0 546 aaPredicted RBP22.99■■□□□ 1.27
CHRNA4-209ENST00000627000 SGMS1Q86VZ5 419 aa22.99■■□□□ 1.27
CHRNA4-209ENST00000627000 FTOQ9C0B1 505 aaKnown RBP eCLIP22.99■■□□□ 1.27
CHRNA4-209ENST00000627000 GPSM2P81274 684 aa22.98■■□□□ 1.27
CHRNA4-209ENST00000627000 CEBPZQ03701 1054 aaKnown RBP22.98■■□□□ 1.27
CHRNA4-209ENST00000627000 AATFQ9NY61 560 aaKnown RBP eCLIP22.98■■□□□ 1.27
CHRNA4-209ENST00000627000 CCDC88AQ3V6T2 1871 aa22.98■■□□□ 1.27
CHRNA4-209ENST00000627000 ZBTB43O43298 467 aa22.97■■□□□ 1.27
CHRNA4-209ENST00000627000 LIG1P18858 919 aa22.97■■□□□ 1.27
CHRNA4-209ENST00000627000 LIFRP42702 1097 aa22.97■■□□□ 1.27
CHRNA4-209ENST00000627000 RBM6P78332 1123 aaKnown RBP22.97■■□□□ 1.27
CHRNA4-209ENST00000627000 ZNF827Q17R98 1081 aa22.97■■□□□ 1.27
CHRNA4-209ENST00000627000 PGBD1Q96JS3 809 aa22.97■■□□□ 1.27
CHRNA4-209ENST00000627000 TSPY26PQ9H489 355 aa22.97■■□□□ 1.27
CHRNA4-209ENST00000627000 RNF214Q8ND24 703 aa22.97■■□□□ 1.27
CHRNA4-209ENST00000627000 C8orf76Q96K31 380 aa22.97■■□□□ 1.27
CHRNA4-209ENST00000627000 ANO8Q9HCE9 1232 aaPredicted RBP22.97■■□□□ 1.27
CHRNA4-209ENST00000627000 FAM217BQ9NTX9 383 aaPredicted RBP22.96■■□□□ 1.27
CHRNA4-209ENST00000627000 ANAPC4Q9UJX5 808 aa22.96■■□□□ 1.27
CHRNA4-209ENST00000627000 MAST2Q6P0Q8 1798 aa22.96■■□□□ 1.27
CHRNA4-209ENST00000627000 EVX2Q03828 476 aa22.96■■□□□ 1.27
CHRNA4-209ENST00000627000 BRIP1Q9BX63 1249 aa22.96■■□□□ 1.27
CHRNA4-209ENST00000627000 RNF41Q9H4P4 317 aaPredicted RBP22.96■■□□□ 1.27
CHRNA4-209ENST00000627000 GOLGA8AA7E2F4 631 aa22.95■■□□□ 1.26
CHRNA4-209ENST00000627000 TDRD7Q8NHU6 1098 aaKnown RBP22.95■■□□□ 1.26
CHRNA4-209ENST00000627000 PHKBQ93100 1093 aa22.95■■□□□ 1.26
CHRNA4-209ENST00000627000 RBM17Q96I25 401 aaKnown RBP22.95■■□□□ 1.26
CHRNA4-209ENST00000627000 AIFM3Q96NN9 605 aa22.95■■□□□ 1.26
CHRNA4-209ENST00000627000 CFAP45Q9UL16 551 aa22.95■■□□□ 1.26
CHRNA4-209ENST00000627000 SLC12A7Q9Y666 1083 aa22.95■■□□□ 1.26
CHRNA4-209ENST00000627000 CCDC69A6NI79 296 aa22.94■■□□□ 1.26
CHRNA4-209ENST00000627000 GIMAP6Q6P9H5 292 aa22.94■■□□□ 1.26
CHRNA4-209ENST00000627000 FBXO18Q8NFZ0 1043 aa22.94■■□□□ 1.26
CHRNA4-209ENST00000627000 USP28Q96RU2 1077 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms