RNA–Protein interactions for RNA: ENST00000625668.2

LINC02028-223, Transcript of long intergenic non-protein coding RNA 2028, human

TSL 5

Gene LINC02028, Length 646 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC02028-223	ENST00000625668	IGSF1	Q8N6C5	1336 aa		9.17	□□□□□ -0.94
LINC02028-223	ENST00000625668		M0R082	166 aa		9.17	□□□□□ -0.94
LINC02028-223	ENST00000625668	ZBTB7B	O15156	539 aa	Predicted RBP	9.17	□□□□□ -0.94
LINC02028-223	ENST00000625668	YY1	P25490	414 aa		9.17	□□□□□ -0.94
LINC02028-223	ENST00000625668	RSPO4	Q2I0M5	234 aa	Predicted RBP	9.17	□□□□□ -0.94
LINC02028-223	ENST00000625668	PRRT3	Q5FWE3	981 aa		9.17	□□□□□ -0.94
LINC02028-223	ENST00000625668	NKAPL	Q5M9Q1	402 aa		9.17	□□□□□ -0.94
LINC02028-223	ENST00000625668	MARCH10	Q8NA82	808 aa	Predicted RBP	9.17	□□□□□ -0.94
LINC02028-223	ENST00000625668	ZNF417	Q8TAU3	575 aa		9.17	□□□□□ -0.94
LINC02028-223	ENST00000625668	ZNF587	Q96SQ5	575 aa	Predicted RBP	9.17	□□□□□ -0.94
LINC02028-223	ENST00000625668	NEUROD4	Q9HD90	331 aa		9.17	□□□□□ -0.94
LINC02028-223	ENST00000625668	EXOC5	O00471	708 aa		9.16	□□□□□ -0.94
LINC02028-223	ENST00000625668	PPP2R1A	P30153	589 aa		9.16	□□□□□ -0.94
LINC02028-223	ENST00000625668	HIRA	P54198	1017 aa	Predicted RBP	9.16	□□□□□ -0.94
LINC02028-223	ENST00000625668	C1orf53	Q5VUE5	145 aa		9.16	□□□□□ -0.94
LINC02028-223	ENST00000625668	MICALL1	Q8N3F8	863 aa		9.16	□□□□□ -0.94
LINC02028-223	ENST00000625668	RAPGEF4	Q8WZA2	1011 aa		9.16	□□□□□ -0.94
LINC02028-223	ENST00000625668	CEP350	Q5VT06	3117 aa		9.15	□□□□□ -0.94
LINC02028-223	ENST00000625668	ALB	P02768	609 aa		9.15	□□□□□ -0.94
LINC02028-223	ENST00000625668	IL13	P35225	146 aa		9.15	□□□□□ -0.94
LINC02028-223	ENST00000625668	KCNQ4	P56696	695 aa		9.15	□□□□□ -0.94
LINC02028-223	ENST00000625668	SPEM2	Q0P670	501 aa		9.15	□□□□□ -0.94
LINC02028-223	ENST00000625668	FAM196A	Q6ZSG2	479 aa		9.15	□□□□□ -0.94
LINC02028-223	ENST00000625668	TRIM50	Q86XT4	487 aa		9.15	□□□□□ -0.94
LINC02028-223	ENST00000625668	RHPN1	Q8TCX5	695 aa		9.15	□□□□□ -0.94
LINC02028-223	ENST00000625668	KIAA1024	Q9UPX6	916 aa		9.15	□□□□□ -0.94
LINC02028-223	ENST00000625668	RGPD1	P0DJD0	1748 aa		9.14	□□□□□ -0.95
LINC02028-223	ENST00000625668	PSMA6	P60900	246 aa	Known RBP	9.14	□□□□□ -0.95
LINC02028-223	ENST00000625668	ZMYM1	Q5SVZ6	1142 aa		9.14	□□□□□ -0.95
LINC02028-223	ENST00000625668	AEBP1	Q8IUX7	1158 aa		9.14	□□□□□ -0.95
LINC02028-223	ENST00000625668	PLEKHM2	Q8IWE5	1019 aa		9.14	□□□□□ -0.95
LINC02028-223	ENST00000625668	TPCN2	Q8NHX9	752 aa		9.14	□□□□□ -0.95
LINC02028-223	ENST00000625668	ZCRB1	Q8TBF4	217 aa	Known RBP	9.14	□□□□□ -0.95
LINC02028-223	ENST00000625668	DDX54	Q8TDD1	881 aa	Known RBP	9.14	□□□□□ -0.95
LINC02028-223	ENST00000625668	TPSG1	Q9NRR2	321 aa		9.14	□□□□□ -0.95
LINC02028-223	ENST00000625668	RGPD2	P0DJD1	1756 aa		9.14	□□□□□ -0.95
LINC02028-223	ENST00000625668	BCL9	O00512	1426 aa		9.14	□□□□□ -0.95
LINC02028-223	ENST00000625668	DIAPH1	O60610	1272 aa	Known RBP	9.13	□□□□□ -0.95
LINC02028-223	ENST00000625668	TRIM37	O94972	964 aa		9.13	□□□□□ -0.95
LINC02028-223	ENST00000625668	APBA3	O96018	575 aa		9.13	□□□□□ -0.95
LINC02028-223	ENST00000625668	NID1	P14543	1247 aa		9.13	□□□□□ -0.95
LINC02028-223	ENST00000625668	ADH7	P40394	386 aa		9.13	□□□□□ -0.95
LINC02028-223	ENST00000625668	CLDN10	P78369	228 aa		9.13	□□□□□ -0.95
LINC02028-223	ENST00000625668	C20orf204	Q6ZNR8	217 aa		9.13	□□□□□ -0.95
LINC02028-223	ENST00000625668	C8orf86	Q6ZUL3	223 aa		9.13	□□□□□ -0.95
LINC02028-223	ENST00000625668	POM121	Q96HA1	1249 aa		9.13	□□□□□ -0.95
LINC02028-223	ENST00000625668	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	9.13	□□□□□ -0.95
LINC02028-223	ENST00000625668	BRD7	Q9NPI1	651 aa		9.13	□□□□□ -0.95
LINC02028-223	ENST00000625668	KDR	P35968	1356 aa		9.12	□□□□□ -0.95
LINC02028-223	ENST00000625668	PLEKHG2	Q9H7P9	1386 aa		9.12	□□□□□ -0.95
LINC02028-223	ENST00000625668	PCDH11X	Q9BZA7	1347 aa		9.12	□□□□□ -0.95
LINC02028-223	ENST00000625668	PCDH11Y	Q9BZA8	1340 aa		9.12	□□□□□ -0.95
LINC02028-223	ENST00000625668	TNS1	Q9HBL0	1735 aa	Known RBP	9.12	□□□□□ -0.95
LINC02028-223	ENST00000625668	FAM229A	H3BQW9	127 aa		9.12	□□□□□ -0.95
LINC02028-223	ENST00000625668	ATP1A2	P50993	1020 aa		9.12	□□□□□ -0.95
LINC02028-223	ENST00000625668	SF3B2	Q13435	895 aa	Known RBP	9.12	□□□□□ -0.95
LINC02028-223	ENST00000625668	CCDC102B	Q68D86	513 aa		9.12	□□□□□ -0.95
LINC02028-223	ENST00000625668	SULT6B1	Q6IMI4	303 aa		9.12	□□□□□ -0.95
LINC02028-223	ENST00000625668	WWC1	Q8IX03	1113 aa		9.12	□□□□□ -0.95
LINC02028-223	ENST00000625668	ADAMTS19	Q8TE59	1207 aa		9.12	□□□□□ -0.95
LINC02028-223	ENST00000625668	CFAP53	Q96M91	514 aa		9.12	□□□□□ -0.95
LINC02028-223	ENST00000625668	ANKIB1	Q9P2G1	1089 aa		9.12	□□□□□ -0.95
LINC02028-223	ENST00000625668	MAP2	P11137	1827 aa	Known RBP	9.12	□□□□□ -0.95
LINC02028-223	ENST00000625668	PKD1L3	Q7Z443	1732 aa		9.11	□□□□□ -0.95
LINC02028-223	ENST00000625668	SHANK3	Q9BYB0	1731 aa		9.11	□□□□□ -0.95
LINC02028-223	ENST00000625668		M0R2N6	131 aa		9.11	□□□□□ -0.95
LINC02028-223	ENST00000625668	U2SURP	O15042	1029 aa	Known RBP	9.11	□□□□□ -0.95
LINC02028-223	ENST00000625668	HMOX1	P09601	288 aa		9.11	□□□□□ -0.95
LINC02028-223	ENST00000625668	TRIM28	Q13263	835 aa	Known RBP	9.11	□□□□□ -0.95
LINC02028-223	ENST00000625668	RALBP1	Q15311	655 aa		9.11	□□□□□ -0.95
LINC02028-223	ENST00000625668	PTF1A	Q7RTS3	328 aa		9.11	□□□□□ -0.95
LINC02028-223	ENST00000625668	RAB44	Q7Z6P3	723 aa	Predicted RBP	9.11	□□□□□ -0.95
LINC02028-223	ENST00000625668	DEFB132	Q7Z7B7	95 aa		9.11	□□□□□ -0.95
LINC02028-223	ENST00000625668	CEP63	Q96MT8	703 aa		9.11	□□□□□ -0.95
LINC02028-223	ENST00000625668	HCN4	Q9Y3Q4	1203 aa		9.11	□□□□□ -0.95
LINC02028-223	ENST00000625668	USP17L3	A6NCW0	530 aa		9.1	□□□□□ -0.95
LINC02028-223	ENST00000625668	USP17L4	A6NCW7	530 aa		9.1	□□□□□ -0.95
LINC02028-223	ENST00000625668	CYP27B1	O15528	508 aa		9.1	□□□□□ -0.95
LINC02028-223	ENST00000625668	KCNQ2	O43526	872 aa		9.1	□□□□□ -0.95
LINC02028-223	ENST00000625668	TYRO3	Q06418	890 aa		9.1	□□□□□ -0.95
LINC02028-223	ENST00000625668	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	9.1	□□□□□ -0.95
LINC02028-223	ENST00000625668	USP17L2	Q6R6M4	530 aa		9.1	□□□□□ -0.95
LINC02028-223	ENST00000625668	FOXD4L3	Q6VB84	417 aa	Predicted RBP	9.1	□□□□□ -0.95
LINC02028-223	ENST00000625668	USP17L1	Q7RTZ2	530 aa		9.1	□□□□□ -0.95
LINC02028-223	ENST00000625668	ACSBG1	Q96GR2	724 aa		9.1	□□□□□ -0.95
LINC02028-223	ENST00000625668	HSH2D	Q96JZ2	352 aa		9.1	□□□□□ -0.95
LINC02028-223	ENST00000625668	PSMG3-AS1	Q96PY0	264 aa		9.1	□□□□□ -0.95
LINC02028-223	ENST00000625668	NACC1	Q96RE7	527 aa		9.1	□□□□□ -0.95
LINC02028-223	ENST00000625668	PHACTR1	Q9C0D0	580 aa		9.1	□□□□□ -0.95
LINC02028-223	ENST00000625668	KCNH4	Q9UQ05	1017 aa		9.1	□□□□□ -0.95
LINC02028-223	ENST00000625668	SPG7	Q9UQ90	795 aa		9.1	□□□□□ -0.95
LINC02028-223	ENST00000625668	NHS	Q6T4R5	1651 aa		9.1	□□□□□ -0.95
LINC02028-223	ENST00000625668	UTRN	P46939	3433 aa		9.09	□□□□□ -0.95
LINC02028-223	ENST00000625668	MYBBP1A	Q9BQG0	1328 aa	Known RBP	9.09	□□□□□ -0.95
LINC02028-223	ENST00000625668	SFI1	A8K8P3	1242 aa		9.09	□□□□□ -0.95
LINC02028-223	ENST00000625668	DYRK3	O43781	588 aa		9.09	□□□□□ -0.95
LINC02028-223	ENST00000625668	LARGE2	Q8N3Y3	721 aa		9.09	□□□□□ -0.95
LINC02028-223	ENST00000625668	ZNF280C	Q8ND82	737 aa		9.09	□□□□□ -0.95
LINC02028-223	ENST00000625668	SUSD3	Q96L08	255 aa		9.09	□□□□□ -0.95
LINC02028-223	ENST00000625668	UCN2	Q96RP3	112 aa		9.09	□□□□□ -0.95

Retrieved 100 of 20,778 RNA–protein pairs in 19 ms