RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 ZGPATQ8N5A5 531 aaKnown RBP11.7□□□□□ -0.54
LINC01560-202ENST00000624822 SPATA5Q8NB90 893 aa11.7□□□□□ -0.54
LINC01560-202ENST00000624822 DCTPP1Q9H773 170 aa11.7□□□□□ -0.54
LINC01560-202ENST00000624822 GGA3Q9NZ52 723 aa11.7□□□□□ -0.54
LINC01560-202ENST00000624822 MYH7P12883 1935 aa11.7□□□□□ -0.54
LINC01560-202ENST00000624822 DOCK2Q92608 1830 aa11.7□□□□□ -0.54
LINC01560-202ENST00000624822 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.69□□□□□ -0.54
LINC01560-202ENST00000624822 WNT10BO00744 389 aa11.69□□□□□ -0.54
LINC01560-202ENST00000624822 MYO1BO43795 1136 aa11.69□□□□□ -0.54
LINC01560-202ENST00000624822 LDHBP07195 334 aaKnown RBP11.69□□□□□ -0.54
LINC01560-202ENST00000624822 HOXB3P14651 431 aaPredicted RBP11.69□□□□□ -0.54
LINC01560-202ENST00000624822 MCAMP43121 646 aa11.69□□□□□ -0.54
LINC01560-202ENST00000624822 GRIK5Q16478 980 aa11.69□□□□□ -0.54
LINC01560-202ENST00000624822 NBPF9Q3BBW0 867 aa11.69□□□□□ -0.54
LINC01560-202ENST00000624822 ANGEL2Q5VTE6 544 aaKnown RBP11.69□□□□□ -0.54
LINC01560-202ENST00000624822 PI16Q6UXB8 463 aa11.69□□□□□ -0.54
LINC01560-202ENST00000624822 SPNS2Q8IVW8 549 aa11.69□□□□□ -0.54
LINC01560-202ENST00000624822 ZC3H15Q8WU90 426 aaKnown RBP11.69□□□□□ -0.54
LINC01560-202ENST00000624822 ZFP91Q96JP5 570 aaPredicted RBP11.69□□□□□ -0.54
LINC01560-202ENST00000624822 SNRKQ9NRH2 765 aa11.69□□□□□ -0.54
LINC01560-202ENST00000624822 HMG20BQ9P0W2 317 aa11.69□□□□□ -0.54
LINC01560-202ENST00000624822 ASTN2O75129 1339 aaPredicted RBP11.68□□□□□ -0.54
LINC01560-202ENST00000624822 FAM205CA6NFA0 338 aa11.68□□□□□ -0.54
LINC01560-202ENST00000624822 PRDX5P30044 214 aa11.68□□□□□ -0.54
LINC01560-202ENST00000624822 CRKP46108 304 aa11.68□□□□□ -0.54
LINC01560-202ENST00000624822 SPTY2D1Q68D10 685 aaPredicted RBP11.68□□□□□ -0.54
LINC01560-202ENST00000624822 DZIP1Q86YF9 867 aaKnown RBP11.68□□□□□ -0.54
LINC01560-202ENST00000624822 SULF1Q8IWU6 871 aa11.68□□□□□ -0.54
LINC01560-202ENST00000624822 TEKT1Q969V4 418 aa11.68□□□□□ -0.54
LINC01560-202ENST00000624822 HS3ST6Q96QI5 342 aa11.68□□□□□ -0.54
LINC01560-202ENST00000624822 GLIS2Q9BZE0 524 aaPredicted RBP11.68□□□□□ -0.54
LINC01560-202ENST00000624822 RWDD1Q9H446 243 aaPredicted RBP11.68□□□□□ -0.54
LINC01560-202ENST00000624822 SERPINA10Q9UK55 444 aa11.68□□□□□ -0.54
LINC01560-202ENST00000624822 SUGT1Q9Y2Z0 365 aa11.68□□□□□ -0.54
LINC01560-202ENST00000624822 PCDHAC2Q9Y5I4 1007 aa11.68□□□□□ -0.54
LINC01560-202ENST00000624822 PDS5AQ29RF7 1337 aaKnown RBP11.67□□□□□ -0.54
LINC01560-202ENST00000624822 SALL1Q9NSC2 1324 aa11.67□□□□□ -0.54
LINC01560-202ENST00000624822 HDAC1Q13547 482 aaPredicted RBP11.67□□□□□ -0.54
LINC01560-202ENST00000624822 ERICH6Q7L0X2 663 aa11.67□□□□□ -0.54
LINC01560-202ENST00000624822 CDC37L1Q7L3B6 337 aa11.67□□□□□ -0.54
LINC01560-202ENST00000624822 KRT26Q7Z3Y9 468 aa11.67□□□□□ -0.54
LINC01560-202ENST00000624822 USP48Q86UV5 1035 aa11.67□□□□□ -0.54
LINC01560-202ENST00000624822 GCC1Q96CN9 775 aa11.67□□□□□ -0.54
LINC01560-202ENST00000624822 ZNF408Q9H9D4 720 aa11.67□□□□□ -0.54
LINC01560-202ENST00000624822 VEZTQ9HBM0 779 aa11.67□□□□□ -0.54
LINC01560-202ENST00000624822 RAI14Q9P0K7 980 aa11.67□□□□□ -0.54
LINC01560-202ENST00000624822 LRP2BPQ9P2M1 347 aa11.67□□□□□ -0.54
LINC01560-202ENST00000624822 SCAF8Q9UPN6 1271 aaKnown RBP11.67□□□□□ -0.54
LINC01560-202ENST00000624822 CLRN2A0PK11 232 aa11.66□□□□□ -0.54
LINC01560-202ENST00000624822 ADM5C9JUS6 153 aa11.66□□□□□ -0.54
LINC01560-202ENST00000624822 TRAF5O00463 557 aa11.66□□□□□ -0.54
LINC01560-202ENST00000624822 ITGBL1O95965 494 aaPredicted RBP11.66□□□□□ -0.54
LINC01560-202ENST00000624822 HSPA6P17066 643 aa11.66□□□□□ -0.54
LINC01560-202ENST00000624822 ZAP70P43403 619 aa11.66□□□□□ -0.54
LINC01560-202ENST00000624822 FMR1Q06787 632 aaKnown RBP eCLIP11.66□□□□□ -0.54
LINC01560-202ENST00000624822 MMRN1Q13201 1228 aa11.66□□□□□ -0.54
LINC01560-202ENST00000624822 DIXDC1Q155Q3 683 aa11.66□□□□□ -0.54
LINC01560-202ENST00000624822 ANKRD45Q5TZF3 282 aa11.66□□□□□ -0.54
LINC01560-202ENST00000624822 TBC1D9Q6ZT07 1266 aa11.66□□□□□ -0.54
LINC01560-202ENST00000624822 MTMR14Q8NCE2 650 aa11.66□□□□□ -0.54
LINC01560-202ENST00000624822 GPATCH3Q96I76 525 aa11.66□□□□□ -0.54
LINC01560-202ENST00000624822 ZNF512BQ96KM6 892 aaPredicted RBP11.66□□□□□ -0.54
LINC01560-202ENST00000624822 PRMT6Q96LA8 375 aaPredicted RBP11.66□□□□□ -0.54
LINC01560-202ENST00000624822 PGAP2Q9UHJ9 254 aa11.66□□□□□ -0.54
LINC01560-202ENST00000624822 NDUFB9Q9Y6M9 179 aa11.66□□□□□ -0.54
LINC01560-202ENST00000624822 CDK5RAP2Q96SN8 1893 aa11.66□□□□□ -0.54
LINC01560-202ENST00000624822 PASKQ96RG2 1323 aa11.65□□□□□ -0.54
LINC01560-202ENST00000624822 PITPNM2Q9BZ72 1349 aa11.65□□□□□ -0.54
LINC01560-202ENST00000624822 NEFLP07196 543 aa11.65□□□□□ -0.54
LINC01560-202ENST00000624822 APLP1P51693 650 aa11.65□□□□□ -0.54
LINC01560-202ENST00000624822 HDLBPQ00341 1268 aaKnown RBP11.65□□□□□ -0.54
LINC01560-202ENST00000624822 B4GALNT3Q6L9W6 998 aa11.65□□□□□ -0.54
LINC01560-202ENST00000624822 APOBEC3FQ8IUX4 373 aaKnown RBP11.65□□□□□ -0.54
LINC01560-202ENST00000624822 SLF2Q8IX21 1173 aa11.65□□□□□ -0.54
LINC01560-202ENST00000624822 MS4A4AQ96JQ5 239 aa11.65□□□□□ -0.54
LINC01560-202ENST00000624822 DNAJC2Q99543 621 aaKnown RBP11.65□□□□□ -0.54
LINC01560-202ENST00000624822 TDRD3Q9H7E2 651 aaKnown RBP11.65□□□□□ -0.54
LINC01560-202ENST00000624822 TMOD2Q9NZR1 351 aa11.65□□□□□ -0.54
LINC01560-202ENST00000624822 CELF2O95319 508 aaKnown RBP11.64□□□□□ -0.55
LINC01560-202ENST00000624822 CYP2E1P05181 493 aaPredicted RBP11.64□□□□□ -0.55
LINC01560-202ENST00000624822 MECOMQ03112 1051 aa11.64□□□□□ -0.55
LINC01560-202ENST00000624822 HHIPL2Q6UWX4 724 aa11.64□□□□□ -0.55
LINC01560-202ENST00000624822 DLK2Q6UY11 383 aa11.64□□□□□ -0.55
LINC01560-202ENST00000624822 ZBED3Q96IU2 234 aaPredicted RBP11.64□□□□□ -0.55
LINC01560-202ENST00000624822 BOLA2Q9H3K6 86 aa11.64□□□□□ -0.55
LINC01560-202ENST00000624822 FOCADQ5VW36 1801 aa11.63□□□□□ -0.55
LINC01560-202ENST00000624822 TMEM88BA6NKF7 163 aa11.63□□□□□ -0.55
LINC01560-202ENST00000624822 IDH1O75874 414 aaKnown RBP11.63□□□□□ -0.55
LINC01560-202ENST00000624822 IGHDP01880 384 aa11.63□□□□□ -0.55
LINC01560-202ENST00000624822 TNNI2P48788 182 aa11.63□□□□□ -0.55
LINC01560-202ENST00000624822 GSTO1P78417 241 aa11.63□□□□□ -0.55
LINC01560-202ENST00000624822 HTRA3P83110 453 aa11.63□□□□□ -0.55
LINC01560-202ENST00000624822 TNFAIP1Q13829 316 aa11.63□□□□□ -0.55
LINC01560-202ENST00000624822 TMEM92Q6UXU6 159 aa11.63□□□□□ -0.55
LINC01560-202ENST00000624822 ZDHHC15Q96MV8 337 aa11.63□□□□□ -0.55
LINC01560-202ENST00000624822 NOL10Q9BSC4 688 aaKnown RBP11.63□□□□□ -0.55
LINC01560-202ENST00000624822 MRIQ9BWK5 157 aa11.63□□□□□ -0.55
LINC01560-202ENST00000624822 ZNF70Q9UC06 446 aaPredicted RBP11.63□□□□□ -0.55
LINC01560-202ENST00000624822 DAGLAQ9Y4D2 1042 aa11.63□□□□□ -0.55
LINC01560-202ENST00000624822 MROH7-TTC4A0A0A0MT08 1334 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms