RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 PRIM1P49642 420 aaKnown RBP10.54□□□□□ -0.72
USB1-216ENST00000624720 ZSCAN23Q3MJ62 389 aa10.54□□□□□ -0.72
USB1-216ENST00000624720 LARP1BQ659C4 914 aaKnown RBP10.54□□□□□ -0.72
USB1-216ENST00000624720 CLEC17AQ6ZS10 378 aa10.54□□□□□ -0.72
USB1-216ENST00000624720 FAM114A1Q8IWE2 563 aa10.54□□□□□ -0.72
USB1-216ENST00000624720 PHAXQ9H814 394 aaKnown RBP10.54□□□□□ -0.72
USB1-216ENST00000624720 AKAP12Q02952 1782 aa10.54□□□□□ -0.72
USB1-216ENST00000624720 HOXA10P31260 410 aaPredicted RBP10.54□□□□□ -0.72
USB1-216ENST00000624720 HNRNPH1P31943 449 aaKnown RBP10.54□□□□□ -0.72
USB1-216ENST00000624720 SLFNL1Q499Z3 407 aa10.54□□□□□ -0.72
USB1-216ENST00000624720 ERC1Q8IUD2 1116 aa10.54□□□□□ -0.72
USB1-216ENST00000624720 LNPKQ9C0E8 428 aa10.54□□□□□ -0.72
USB1-216ENST00000624720 RSPH9Q9H1X1 276 aaPredicted RBP10.54□□□□□ -0.72
USB1-216ENST00000624720 KLHL42Q9P2K6 505 aa10.54□□□□□ -0.72
USB1-216ENST00000624720 COMMD10Q9Y6G5 202 aa10.54□□□□□ -0.72
USB1-216ENST00000624720 PTPRCP08575 1304 aa10.54□□□□□ -0.72
USB1-216ENST00000624720 BTBD11A6QL63 1104 aa10.53□□□□□ -0.72
USB1-216ENST00000624720 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.53□□□□□ -0.72
USB1-216ENST00000624720 ATP6V1G1O75348 118 aa10.53□□□□□ -0.72
USB1-216ENST00000624720 ZNF189O75820 626 aaPredicted RBP10.53□□□□□ -0.72
USB1-216ENST00000624720 FBXO38Q6PIJ6 1188 aa10.53□□□□□ -0.72
USB1-216ENST00000624720 KCNN1Q92952 543 aa10.53□□□□□ -0.72
USB1-216ENST00000624720 VTI1AQ96AJ9 217 aa10.53□□□□□ -0.72
USB1-216ENST00000624720 A0A087WUV0 522 aaPredicted RBP10.53□□□□□ -0.72
USB1-216ENST00000624720 H7C1W4 665 aa10.53□□□□□ -0.72
USB1-216ENST00000624720 MRPL12P52815 198 aaKnown RBP10.53□□□□□ -0.72
USB1-216ENST00000624720 CLASRPQ8N2M8 674 aaKnown RBP10.53□□□□□ -0.72
USB1-216ENST00000624720 TRPV5Q9NQA5 729 aa10.53□□□□□ -0.72
USB1-216ENST00000624720 PDRG1Q9NUG6 133 aa10.53□□□□□ -0.72
USB1-216ENST00000624720 ATP8A1Q9Y2Q0 1164 aa10.53□□□□□ -0.72
USB1-216ENST00000624720 TOPAZ1Q8N9V7 1692 aa10.53□□□□□ -0.72
USB1-216ENST00000624720 FMN2Q9NZ56 1722 aa10.53□□□□□ -0.72
USB1-216ENST00000624720 ANKRD26Q9UPS8 1709 aa10.53□□□□□ -0.72
USB1-216ENST00000624720 KIF2AO00139 706 aaPredicted RBP10.52□□□□□ -0.72
USB1-216ENST00000624720 SCRN1Q12765 414 aa10.52□□□□□ -0.72
USB1-216ENST00000624720 FAAH2Q6GMR7 532 aa10.52□□□□□ -0.72
USB1-216ENST00000624720 CCDC65Q8IXS2 484 aa10.52□□□□□ -0.72
USB1-216ENST00000624720 C1orf131Q8NDD1 294 aaKnown RBP10.52□□□□□ -0.72
USB1-216ENST00000624720 FAM81AQ8TBF8 368 aa10.52□□□□□ -0.72
USB1-216ENST00000624720 CENPOQ9BU64 300 aa10.52□□□□□ -0.72
USB1-216ENST00000624720 TTC12Q9H892 705 aaPredicted RBP10.52□□□□□ -0.72
USB1-216ENST00000624720 GPCPD1Q9NPB8 672 aa10.52□□□□□ -0.72
USB1-216ENST00000624720 ARHGEF10O15013 1369 aa10.52□□□□□ -0.72
USB1-216ENST00000624720 SEC24BO95487 1268 aa10.52□□□□□ -0.73
USB1-216ENST00000624720 EIF4BP23588 611 aaKnown RBP10.52□□□□□ -0.73
USB1-216ENST00000624720 PLEKHO1Q53GL0 409 aaPredicted RBP10.52□□□□□ -0.73
USB1-216ENST00000624720 CCDC73Q6ZRK6 1079 aa10.52□□□□□ -0.73
USB1-216ENST00000624720 CATIPQ7Z7H3 387 aa10.52□□□□□ -0.73
USB1-216ENST00000624720 CCDC112Q8NEF3 446 aa10.52□□□□□ -0.73
USB1-216ENST00000624720 SAAL1Q96ER3 474 aa10.52□□□□□ -0.73
USB1-216ENST00000624720 CIZ1Q9ULV3 898 aaPredicted RBP10.52□□□□□ -0.73
USB1-216ENST00000624720 NRKQ7Z2Y5 1582 aa10.52□□□□□ -0.73
USB1-216ENST00000624720 MYL6BP14649 208 aa10.51□□□□□ -0.73
USB1-216ENST00000624720 NSUN2Q08J23 767 aaKnown RBP eCLIP10.51□□□□□ -0.73
USB1-216ENST00000624720 TAF7Q15545 349 aaPredicted RBP10.51□□□□□ -0.73
USB1-216ENST00000624720 LARP1Q6PKG0 1096 aaKnown RBP10.51□□□□□ -0.73
USB1-216ENST00000624720 OTUD6AQ7L8S5 288 aa10.51□□□□□ -0.73
USB1-216ENST00000624720 SMC5Q8IY18 1101 aa10.51□□□□□ -0.73
USB1-216ENST00000624720 MYO1HQ8N1T3 1032 aa10.51□□□□□ -0.73
USB1-216ENST00000624720 SPDYE1Q8NFV5 336 aaPredicted RBP10.51□□□□□ -0.73
USB1-216ENST00000624720 TBC1D32Q96NH3 1257 aa10.51□□□□□ -0.73
USB1-216ENST00000624720 STK31Q9BXU1 1019 aa10.51□□□□□ -0.73
USB1-216ENST00000624720 ODF2LQ9ULJ1 636 aa10.51□□□□□ -0.73
USB1-216ENST00000624720 MAPK8IP1Q9UQF2 711 aa10.51□□□□□ -0.73
USB1-216ENST00000624720 DCCP43146 1447 aa10.51□□□□□ -0.73
USB1-216ENST00000624720 SPATA31A3Q5VYP0 1347 aa10.51□□□□□ -0.73
USB1-216ENST00000624720 LRRC10BA6NIK2 292 aa10.51□□□□□ -0.73
USB1-216ENST00000624720 GOLGA6L19H0YKK7 550 aa10.51□□□□□ -0.73
USB1-216ENST00000624720 SDCCAG8Q86SQ7 713 aaPredicted RBP10.51□□□□□ -0.73
USB1-216ENST00000624720 TCP11Q8WWU5 503 aa10.51□□□□□ -0.73
USB1-216ENST00000624720 SYTL4Q96C24 671 aaPredicted RBP10.51□□□□□ -0.73
USB1-216ENST00000624720 MEIS3Q99687 375 aa10.51□□□□□ -0.73
USB1-216ENST00000624720 PSD3Q9NYI0 1048 aa10.51□□□□□ -0.73
USB1-216ENST00000624720 BARX2Q9UMQ3 279 aaPredicted RBP10.51□□□□□ -0.73
USB1-216ENST00000624720 DDX19BQ9UMR2 479 aa10.51□□□□□ -0.73
USB1-216ENST00000624720 MAP3K5Q99683 1374 aa10.51□□□□□ -0.73
USB1-216ENST00000624720 BOLA2-SMG1P6H3BVE0 249 aa10.51□□□□□ -0.73
USB1-216ENST00000624720 PTCD1O75127 700 aaKnown RBP10.51□□□□□ -0.73
USB1-216ENST00000624720 GPTP24298 496 aa10.51□□□□□ -0.73
USB1-216ENST00000624720 GJC2Q5T442 439 aaPredicted RBP10.51□□□□□ -0.73
USB1-216ENST00000624720 KIAA1328Q86T90 577 aa10.51□□□□□ -0.73
USB1-216ENST00000624720 VPS37AQ8NEZ2 397 aa10.51□□□□□ -0.73
USB1-216ENST00000624720 UBAP1LF5GYI3 381 aa10.5□□□□□ -0.73
USB1-216ENST00000624720 TGFB3P10600 412 aa10.5□□□□□ -0.73
USB1-216ENST00000624720 CAVIN1Q6NZI2 390 aaKnown RBP10.5□□□□□ -0.73
USB1-216ENST00000624720 NBPF15Q8N660 670 aa10.5□□□□□ -0.73
USB1-216ENST00000624720 MIPOL1Q8TD10 442 aa10.5□□□□□ -0.73
USB1-216ENST00000624720 FBXW7Q969H0 707 aa10.5□□□□□ -0.73
USB1-216ENST00000624720 SLC7A5P2Q9GIP4 190 aa10.5□□□□□ -0.73
USB1-216ENST00000624720 RGL1Q9NZL6 768 aa10.5□□□□□ -0.73
USB1-216ENST00000624720 CHPF2Q9P2E5 772 aa10.5□□□□□ -0.73
USB1-216ENST00000624720 HDAC6Q9UBN7 1215 aa10.5□□□□□ -0.73
USB1-216ENST00000624720 HARSP12081 509 aaKnown RBP10.5□□□□□ -0.73
USB1-216ENST00000624720 PLA2G4AP47712 749 aa10.5□□□□□ -0.73
USB1-216ENST00000624720 LMAN1P49257 510 aa10.5□□□□□ -0.73
USB1-216ENST00000624720 KIF4BQ2VIQ3 1234 aa10.5□□□□□ -0.73
USB1-216ENST00000624720 EXOC4Q96A65 974 aa10.5□□□□□ -0.73
USB1-216ENST00000624720 BTG4Q9NY30 223 aa10.5□□□□□ -0.73
USB1-216ENST00000624720 CLIP2Q9UDT6 1046 aa10.5□□□□□ -0.73
USB1-216ENST00000624720 FHOD1Q9Y613 1164 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms