RNA–Protein interactions for RNA: ENST00000622362.1

FAM200B-223, Transcript of family with sequence similarity 200 member B, human

APPRIS P1 TSL 1 (best) BASIC

Gene FAM200B, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM200B-223	ENST00000622362	PKP1	Q13835	747 aa		13.21	□□□□□ -0.3
FAM200B-223	ENST00000622362	TTF1	Q15361	905 aa	Predicted RBP	13.21	□□□□□ -0.3
FAM200B-223	ENST00000622362	C8orf74	Q6P047	294 aa		13.21	□□□□□ -0.3
FAM200B-223	ENST00000622362	MKRN1	Q9UHC7	482 aa	Known RBP	13.21	□□□□□ -0.3
FAM200B-223	ENST00000622362	ALK	Q9UM73	1620 aa		13.21	□□□□□ -0.3
FAM200B-223	ENST00000622362	SLC5A1	P13866	664 aa		13.2	□□□□□ -0.3
FAM200B-223	ENST00000622362	DMTN	Q08495	405 aa		13.2	□□□□□ -0.3
FAM200B-223	ENST00000622362	UTP14C	Q5TAP6	766 aa	Known RBP	13.2	□□□□□ -0.3
FAM200B-223	ENST00000622362	ZBTB7B	O15156	539 aa	Predicted RBP	13.2	□□□□□ -0.3
FAM200B-223	ENST00000622362	LONRF3	Q496Y0	759 aa		13.2	□□□□□ -0.3
FAM200B-223	ENST00000622362	KLHL34	Q8N239	644 aa		13.2	□□□□□ -0.3
FAM200B-223	ENST00000622362	LEO1	Q8WVC0	666 aa	Predicted RBP	13.2	□□□□□ -0.3
FAM200B-223	ENST00000622362	ANKRD18B	A2A2Z9	1011 aa		13.2	□□□□□ -0.3
FAM200B-223	ENST00000622362	PLCB3	Q01970	1234 aa		13.2	□□□□□ -0.3
FAM200B-223	ENST00000622362	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
FAM200B-223	ENST00000622362	FEZ2	Q9UHY8	353 aa	Predicted RBP	13.2	□□□□□ -0.3
FAM200B-223	ENST00000622362	CCDC172	P0C7W6	258 aa		13.2	□□□□□ -0.3
FAM200B-223	ENST00000622362	ARHGAP25	P42331	645 aa		13.2	□□□□□ -0.3
FAM200B-223	ENST00000622362	BRAP	Q7Z569	592 aa		13.2	□□□□□ -0.3
FAM200B-223	ENST00000622362	KAT14	Q9H8E8	782 aa		13.2	□□□□□ -0.3
FAM200B-223	ENST00000622362	CHPF2	Q9P2E5	772 aa		13.2	□□□□□ -0.3
FAM200B-223	ENST00000622362	NRK	Q7Z2Y5	1582 aa		13.19	□□□□□ -0.3
FAM200B-223	ENST00000622362	ATP6V1A	P38606	617 aa		13.19	□□□□□ -0.3
FAM200B-223	ENST00000622362	LIG3	P49916	1009 aa		13.19	□□□□□ -0.3
FAM200B-223	ENST00000622362	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.19	□□□□□ -0.3
FAM200B-223	ENST00000622362	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.19	□□□□□ -0.3
FAM200B-223	ENST00000622362	BANK1	Q8NDB2	785 aa		13.19	□□□□□ -0.3
FAM200B-223	ENST00000622362	PLEKHF1	Q96S99	279 aa		13.19	□□□□□ -0.3
FAM200B-223	ENST00000622362	DLG5	Q8TDM6	1919 aa		13.19	□□□□□ -0.3
FAM200B-223	ENST00000622362	TBC1D8B	Q0IIM8	1120 aa		13.19	□□□□□ -0.3
FAM200B-223	ENST00000622362	INTS8	Q75QN2	995 aa	Known RBP	13.19	□□□□□ -0.3
FAM200B-223	ENST00000622362	KRI1	Q8N9T8	703 aa	Known RBP	13.19	□□□□□ -0.3
FAM200B-223	ENST00000622362	MTRF1L	Q9UGC7	380 aa	Known RBP	13.19	□□□□□ -0.3
FAM200B-223	ENST00000622362	MAPK8IP1	Q9UQF2	711 aa		13.19	□□□□□ -0.3
FAM200B-223	ENST00000622362	NFE2L3	Q9Y4A8	694 aa		13.19	□□□□□ -0.3
FAM200B-223	ENST00000622362	TNIP1	Q15025	636 aa		13.19	□□□□□ -0.3
FAM200B-223	ENST00000622362	LMBR1	Q8WVP7	490 aa		13.19	□□□□□ -0.3
FAM200B-223	ENST00000622362	SPATA31D1	Q6ZQQ2	1576 aa		13.19	□□□□□ -0.3
FAM200B-223	ENST00000622362	BRD1	O95696	1058 aa		13.18	□□□□□ -0.3
FAM200B-223	ENST00000622362	KRT9	P35527	623 aa		13.18	□□□□□ -0.3
FAM200B-223	ENST00000622362	AMOT	Q4VCS5	1084 aa		13.18	□□□□□ -0.3
FAM200B-223	ENST00000622362	IQUB	Q8NA54	791 aa		13.18	□□□□□ -0.3
FAM200B-223	ENST00000622362	TBC1D5	Q92609	795 aa		13.18	□□□□□ -0.3
FAM200B-223	ENST00000622362	CCDC97	Q96F63	343 aa	Predicted RBP	13.18	□□□□□ -0.3
FAM200B-223	ENST00000622362	IFT74	Q96LB3	600 aa		13.18	□□□□□ -0.3
FAM200B-223	ENST00000622362	SEC62	Q99442	399 aa	Known RBP	13.18	□□□□□ -0.3
FAM200B-223	ENST00000622362	PLIN2	Q99541	437 aa		13.18	□□□□□ -0.3
FAM200B-223	ENST00000622362	TTF2	Q9UNY4	1162 aa	Known RBP	13.18	□□□□□ -0.3
FAM200B-223	ENST00000622362	ZFY	P08048	801 aa	Predicted RBP	13.18	□□□□□ -0.3
FAM200B-223	ENST00000622362	ARID4A	P29374	1257 aa	Predicted RBP	13.18	□□□□□ -0.3
FAM200B-223	ENST00000622362	OTUD7B	Q6GQQ9	843 aa		13.18	□□□□□ -0.3
FAM200B-223	ENST00000622362	MYCBP	Q99417	103 aa	Predicted RBP	13.18	□□□□□ -0.3
FAM200B-223	ENST00000622362	GJC1	P36383	396 aa		13.18	□□□□□ -0.3
FAM200B-223	ENST00000622362	SLC9C2	Q5TAH2	1124 aa		13.18	□□□□□ -0.3
FAM200B-223	ENST00000622362	ANKRD13D	Q6ZTN6	518 aa		13.18	□□□□□ -0.3
FAM200B-223	ENST00000622362	TMTC2	Q8N394	836 aa		13.18	□□□□□ -0.3
FAM200B-223	ENST00000622362	XPO4	Q9C0E2	1151 aa	Known RBP	13.18	□□□□□ -0.3
FAM200B-223	ENST00000622362	CAPN7	Q9Y6W3	813 aa		13.18	□□□□□ -0.3
FAM200B-223	ENST00000622362	TBCA	O75347	108 aa	Known RBP	13.18	□□□□□ -0.3
FAM200B-223	ENST00000622362	ETF1	P62495	437 aa	Known RBP	13.18	□□□□□ -0.3
FAM200B-223	ENST00000622362	PPFIA1	Q13136	1202 aa		13.18	□□□□□ -0.3
FAM200B-223	ENST00000622362	CALCOCO2	Q13137	446 aa		13.18	□□□□□ -0.3
FAM200B-223	ENST00000622362	LMBR1L	Q6UX01	489 aa		13.18	□□□□□ -0.3
FAM200B-223	ENST00000622362	LMNTD2	Q8IXW0	634 aa		13.18	□□□□□ -0.3
FAM200B-223	ENST00000622362	STMN2	Q93045	179 aa		13.18	□□□□□ -0.3
FAM200B-223	ENST00000622362	C3	P01024	1663 aa		13.17	□□□□□ -0.3
FAM200B-223	ENST00000622362	ELP1	O95163	1332 aa		13.17	□□□□□ -0.3
FAM200B-223	ENST00000622362	TMEM110-MUSTN1	A8MSY1	372 aa		13.17	□□□□□ -0.3
FAM200B-223	ENST00000622362	GRM8	O00222	908 aa		13.17	□□□□□ -0.3
FAM200B-223	ENST00000622362	ATP2A1	O14983	1001 aa		13.17	□□□□□ -0.3
FAM200B-223	ENST00000622362	RAPGEF3	O95398	923 aa		13.17	□□□□□ -0.3
FAM200B-223	ENST00000622362	PRPH	P41219	470 aa		13.17	□□□□□ -0.3
FAM200B-223	ENST00000622362	ATP11A	P98196	1134 aa		13.17	□□□□□ -0.3
FAM200B-223	ENST00000622362	MTX1	Q13505	466 aa		13.17	□□□□□ -0.3
FAM200B-223	ENST00000622362	DDX12P	Q92771	950 aa		13.17	□□□□□ -0.3
FAM200B-223	ENST00000622362	TACO1	Q9BSH4	297 aa	Known RBP	13.17	□□□□□ -0.3
FAM200B-223	ENST00000622362	LRRC27	Q9C0I9	530 aa		13.17	□□□□□ -0.3
FAM200B-223	ENST00000622362	IMPACT	Q9P2X3	320 aa		13.17	□□□□□ -0.3
FAM200B-223	ENST00000622362	GCK	P35557	465 aa		13.17	□□□□□ -0.3
FAM200B-223	ENST00000622362	PDE4B	Q07343	736 aa		13.17	□□□□□ -0.3
FAM200B-223	ENST00000622362	GSTA5	Q7RTV2	222 aa		13.17	□□□□□ -0.3
FAM200B-223	ENST00000622362	ESR2	Q92731	530 aa		13.17	□□□□□ -0.3
FAM200B-223	ENST00000622362	TRIM31	Q9BZY9	425 aa		13.17	□□□□□ -0.3
FAM200B-223	ENST00000622362	NCOA5	Q9HCD5	579 aa	Known RBP	13.17	□□□□□ -0.3
FAM200B-223	ENST00000622362	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	13.17	□□□□□ -0.3
FAM200B-223	ENST00000622362		A6NNZ2	444 aa		13.17	□□□□□ -0.3
FAM200B-223	ENST00000622362	ALDH3A1	P30838	453 aa		13.17	□□□□□ -0.3
FAM200B-223	ENST00000622362	SEPT6	Q14141	434 aa		13.17	□□□□□ -0.3
FAM200B-223	ENST00000622362	TUBB8	Q3ZCM7	444 aa		13.17	□□□□□ -0.3
FAM200B-223	ENST00000622362	GPR161	Q8N6U8	529 aa	Known RBP	13.17	□□□□□ -0.3
FAM200B-223	ENST00000622362	BCAS4	Q8TDM0	211 aa		13.17	□□□□□ -0.3
FAM200B-223	ENST00000622362	NKIRAS1	Q9NYS0	192 aa		13.17	□□□□□ -0.3
FAM200B-223	ENST00000622362	SOS1	Q07889	1333 aa	Predicted RBP	13.17	□□□□□ -0.3
FAM200B-223	ENST00000622362	TTC41P	Q6P2S7	1318 aa		13.17	□□□□□ -0.3
FAM200B-223	ENST00000622362	TOPAZ1	Q8N9V7	1692 aa		13.17	□□□□□ -0.3
FAM200B-223	ENST00000622362	AGL	P35573	1532 aa		13.16	□□□□□ -0.3
FAM200B-223	ENST00000622362	IFIT1B	Q5T764	474 aa	Known RBP	13.16	□□□□□ -0.3
FAM200B-223	ENST00000622362	ATL3	Q6DD88	541 aa		13.16	□□□□□ -0.3
FAM200B-223	ENST00000622362	VSIG1	Q86XK7	387 aa		13.16	□□□□□ -0.3
FAM200B-223	ENST00000622362	GPIHBP1	Q8IV16	184 aa		13.16	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms