RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 ZNF483Q8TF39 744 aaPredicted RBP8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 RUFY2Q8WXA3 655 aa8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 EVI5LQ96CN4 794 aa8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 EDC3Q96F86 508 aaKnown RBP8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 BAG1Q99933 345 aaPredicted RBP8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 SIL1Q9H173 461 aa8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 DACT1Q9NYF0 836 aa8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 RAB21Q9UL25 225 aa8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 ODF2LQ9ULJ1 636 aa8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 CAMTA1Q9Y6Y1 1673 aa8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 COL15A1P39059 1388 aa8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 ANKRD65E5RJM6 399 aa8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 GRM8O00222 908 aa8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 EBAG9O00559 213 aa8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 SHOX2O60902 331 aaPredicted RBP8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 COQ9O75208 318 aa8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 RTN2O75298 545 aa8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 CHGBP05060 677 aa8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 IGKV5-2P06315 115 aa8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 TUBBP07437 444 aa8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 MAP3K9P80192 1104 aa8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 AIMP1Q12904 312 aaKnown RBP8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 MTA1Q13330 715 aa8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 PDIA6Q15084 440 aa8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 RBBP5Q15291 538 aaKnown RBP8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 CAMK4Q16566 473 aa8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 EPHA10Q5JZY3 1008 aa8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 BEND6Q5SZJ8 279 aaPredicted RBP8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 MAP4K1Q92918 833 aa8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 ZKSCAN4Q969J2 545 aaPredicted RBP8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 SCAND2PQ9GZW5 306 aaPredicted RBP8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 SH2B1Q9NRF2 756 aaPredicted RBP8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 FAM169AQ9Y6X4 670 aa8.58□□□□□ -1.04
TRIM49B-202ENST00000622138 MRC1P22897 1456 aa8.57□□□□□ -1.04
TRIM49B-202ENST00000622138 OVOS2A0A0G2JMS6 1433 aa8.57□□□□□ -1.04
TRIM49B-202ENST00000622138 FSBPO95073 299 aa8.57□□□□□ -1.04
TRIM49B-202ENST00000622138 ESCO1Q5FWF5 840 aa8.57□□□□□ -1.04
TRIM49B-202ENST00000622138 IQCA1Q86XH1 822 aa8.57□□□□□ -1.04
TRIM49B-202ENST00000622138 SPATS2Q86XZ4 545 aaKnown RBP8.57□□□□□ -1.04
TRIM49B-202ENST00000622138 MSANTD4Q8NCY6 345 aa8.57□□□□□ -1.04
TRIM49B-202ENST00000622138 XAGE2Q96GT9 111 aa8.57□□□□□ -1.04
TRIM49B-202ENST00000622138 GPATCH3Q96I76 525 aa8.57□□□□□ -1.04
TRIM49B-202ENST00000622138 ZSCAN31Q96LW9 406 aaPredicted RBP8.57□□□□□ -1.04
TRIM49B-202ENST00000622138 BOLA2Q9H3K6 86 aa8.57□□□□□ -1.04
TRIM49B-202ENST00000622138 UTYO14607 1347 aa8.57□□□□□ -1.04
TRIM49B-202ENST00000622138 ADAMTS7Q9UKP4 1686 aa8.57□□□□□ -1.04
TRIM49B-202ENST00000622138 SLIT3O75094 1523 aa8.57□□□□□ -1.04
TRIM49B-202ENST00000622138 JCADQ9P266 1359 aa8.57□□□□□ -1.04
TRIM49B-202ENST00000622138 BECN2A8MW95 431 aa8.56□□□□□ -1.04
TRIM49B-202ENST00000622138 ZSCAN12O43309 604 aa8.56□□□□□ -1.04
TRIM49B-202ENST00000622138 TOB2Q14106 344 aaPredicted RBP8.56□□□□□ -1.04
TRIM49B-202ENST00000622138 LINS1Q8NG48 757 aa8.56□□□□□ -1.04
TRIM49B-202ENST00000622138 ANKRD24Q8TF21 1146 aa8.56□□□□□ -1.04
TRIM49B-202ENST00000622138 PSMD1Q99460 953 aa8.56□□□□□ -1.04
TRIM49B-202ENST00000622138 FAM204AQ9H8W3 233 aa8.56□□□□□ -1.04
TRIM49B-202ENST00000622138 SNRKQ9NRH2 765 aa8.56□□□□□ -1.04
TRIM49B-202ENST00000622138 AXIN2Q9Y2T1 843 aa8.56□□□□□ -1.04
TRIM49B-202ENST00000622138 CHMP3Q9Y3E7 222 aa8.56□□□□□ -1.04
TRIM49B-202ENST00000622138 NDUFB9Q9Y6M9 179 aa8.56□□□□□ -1.04
TRIM49B-202ENST00000622138 GOLGA6L4A6NEF3 574 aa8.56□□□□□ -1.04
TRIM49B-202ENST00000622138 SNUPNO95149 360 aaKnown RBP8.56□□□□□ -1.04
TRIM49B-202ENST00000622138 SLC39A6Q13433 755 aa8.56□□□□□ -1.04
TRIM49B-202ENST00000622138 SF3B2Q13435 895 aaKnown RBP8.56□□□□□ -1.04
TRIM49B-202ENST00000622138 C1orf141Q5JVX7 400 aa8.56□□□□□ -1.04
TRIM49B-202ENST00000622138 ANKRD23Q86SG2 305 aa8.56□□□□□ -1.04
TRIM49B-202ENST00000622138 ARHGEF25Q86VW2 580 aa8.56□□□□□ -1.04
TRIM49B-202ENST00000622138 ZNF513Q8N8E2 541 aaPredicted RBP8.56□□□□□ -1.04
TRIM49B-202ENST00000622138 FSD1Q9BTV5 496 aa8.56□□□□□ -1.04
TRIM49B-202ENST00000622138 VIPAS39Q9H9C1 493 aa8.56□□□□□ -1.04
TRIM49B-202ENST00000622138 CPSF2Q9P2I0 782 aaKnown RBP8.56□□□□□ -1.04
TRIM49B-202ENST00000622138 L1RE1Q9UN81 338 aa8.56□□□□□ -1.04
TRIM49B-202ENST00000622138 RPS6KL1Q9Y6S9 549 aa8.56□□□□□ -1.04
TRIM49B-202ENST00000622138 RGPD5Q99666 1765 aa8.56□□□□□ -1.04
TRIM49B-202ENST00000622138 ZKSCAN1P17029 563 aaPredicted RBP8.55□□□□□ -1.04
TRIM49B-202ENST00000622138 AARSP49588 968 aaKnown RBP eCLIP8.55□□□□□ -1.04
TRIM49B-202ENST00000622138 SLC8A3P57103 927 aa8.55□□□□□ -1.04
TRIM49B-202ENST00000622138 PLCB4Q15147 1175 aa8.55□□□□□ -1.04
TRIM49B-202ENST00000622138 RCSD1Q6JBY9 416 aa8.55□□□□□ -1.04
TRIM49B-202ENST00000622138 ORAI2Q96SN7 254 aa8.55□□□□□ -1.04
TRIM49B-202ENST00000622138 KDM6AO15550 1401 aaPredicted RBP8.55□□□□□ -1.04
TRIM49B-202ENST00000622138 SHTN1A0MZ66 631 aa8.55□□□□□ -1.04
TRIM49B-202ENST00000622138 JAK2O60674 1132 aa8.55□□□□□ -1.04
TRIM49B-202ENST00000622138 KINO60870 393 aaKnown RBP8.55□□□□□ -1.04
TRIM49B-202ENST00000622138 GCP02774 474 aa8.55□□□□□ -1.04
TRIM49B-202ENST00000622138 MYBL2P10244 700 aa8.55□□□□□ -1.04
TRIM49B-202ENST00000622138 RPS6KB1P23443 525 aa8.55□□□□□ -1.04
TRIM49B-202ENST00000622138 PRPHP41219 470 aa8.55□□□□□ -1.04
TRIM49B-202ENST00000622138 PIP4K2AP48426 406 aaPredicted RBP8.55□□□□□ -1.04
TRIM49B-202ENST00000622138 FNTAP49354 379 aa8.55□□□□□ -1.04
TRIM49B-202ENST00000622138 CCNHP51946 323 aaPredicted RBP8.55□□□□□ -1.04
TRIM49B-202ENST00000622138 STK3Q13188 491 aa8.55□□□□□ -1.04
TRIM49B-202ENST00000622138 G3BP1Q13283 466 aaKnown RBP eCLIP8.55□□□□□ -1.04
TRIM49B-202ENST00000622138 MCM6Q14566 821 aa8.55□□□□□ -1.04
TRIM49B-202ENST00000622138 SLC5A9Q2M3M2 681 aa8.55□□□□□ -1.04
TRIM49B-202ENST00000622138 AMOTQ4VCS5 1084 aa8.55□□□□□ -1.04
TRIM49B-202ENST00000622138 LARP1BQ659C4 914 aaKnown RBP8.55□□□□□ -1.04
TRIM49B-202ENST00000622138 ISM2Q6H9L7 571 aa8.55□□□□□ -1.04
TRIM49B-202ENST00000622138 ARMCX5Q6P1M9 558 aa8.55□□□□□ -1.04
TRIM49B-202ENST00000622138 LARP1Q6PKG0 1096 aaKnown RBP8.55□□□□□ -1.04
TRIM49B-202ENST00000622138 C11orf57Q6ZUT1 292 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms