RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 GNAT3A8MTJ3 354 aa12.95□□□□□ -0.34
CLTC-215ENST00000621829 TBC1D8O95759 1140 aa12.95□□□□□ -0.34
CLTC-215ENST00000621829 INPP1P49441 399 aa12.95□□□□□ -0.34
CLTC-215ENST00000621829 CABP1Q9NZU7 370 aa12.95□□□□□ -0.34
CLTC-215ENST00000621829 BEND3Q5T5X7 828 aa12.95□□□□□ -0.34
CLTC-215ENST00000621829 KCTD16Q68DU8 428 aa12.95□□□□□ -0.34
CLTC-215ENST00000621829 SEPT8Q92599 483 aa12.95□□□□□ -0.34
CLTC-215ENST00000621829 NOX5Q96PH1 765 aa12.95□□□□□ -0.34
CLTC-215ENST00000621829 FAM170AA1A519 330 aa12.95□□□□□ -0.34
CLTC-215ENST00000621829 CFAP61Q8NHU2 1237 aa12.95□□□□□ -0.34
CLTC-215ENST00000621829 HVCN1Q96D96 273 aa12.95□□□□□ -0.34
CLTC-215ENST00000621829 SPOPO43791 374 aa12.94□□□□□ -0.34
CLTC-215ENST00000621829 PPP2R5CQ13362 524 aa12.94□□□□□ -0.34
CLTC-215ENST00000621829 SNRKQ9NRH2 765 aa12.94□□□□□ -0.34
CLTC-215ENST00000621829 PALMDQ9NP74 551 aa12.94□□□□□ -0.34
CLTC-215ENST00000621829 LRRC9Q6ZRR7 1453 aa12.94□□□□□ -0.34
CLTC-215ENST00000621829 RNF8O76064 485 aa12.94□□□□□ -0.34
CLTC-215ENST00000621829 NOC4LQ9BVI4 516 aaKnown RBP12.94□□□□□ -0.34
CLTC-215ENST00000621829 BICC1Q9H694 974 aaKnown RBP12.94□□□□□ -0.34
CLTC-215ENST00000621829 YY1AP1Q9H869 796 aa12.94□□□□□ -0.34
CLTC-215ENST00000621829 TATP17735 454 aaPredicted RBP12.94□□□□□ -0.34
CLTC-215ENST00000621829 TAF11Q15544 211 aa12.94□□□□□ -0.34
CLTC-215ENST00000621829 HAUS1Q96CS2 278 aa12.94□□□□□ -0.34
CLTC-215ENST00000621829 ASIC3Q9UHC3 531 aa12.94□□□□□ -0.34
CLTC-215ENST00000621829 MAPK8IP1Q9UQF2 711 aa12.94□□□□□ -0.34
CLTC-215ENST00000621829 CEP104O60308 925 aa12.94□□□□□ -0.34
CLTC-215ENST00000621829 WTAPQ15007 396 aa12.94□□□□□ -0.34
CLTC-215ENST00000621829 SCOCQ9UIL1 159 aa12.94□□□□□ -0.34
CLTC-215ENST00000621829 hCG_2014768A0A024R1R8 64 aa12.94□□□□□ -0.34
CLTC-215ENST00000621829 HEATR3Q7Z4Q2 680 aa12.94□□□□□ -0.34
CLTC-215ENST00000621829 TSPY2A6NKD2 308 aa12.93□□□□□ -0.34
CLTC-215ENST00000621829 FAM13AO94988 1023 aa12.93□□□□□ -0.34
CLTC-215ENST00000621829 MTMR3Q13615 1198 aa12.93□□□□□ -0.34
CLTC-215ENST00000621829 RTN1Q16799 776 aa12.93□□□□□ -0.34
CLTC-215ENST00000621829 THEGQ9P2T0 379 aa12.93□□□□□ -0.34
CLTC-215ENST00000621829 CFAP221Q4G0U5 840 aa12.93□□□□□ -0.34
CLTC-215ENST00000621829 NUDCD3Q8IVD9 361 aa12.93□□□□□ -0.34
CLTC-215ENST00000621829 ICE2Q659A1 982 aa12.93□□□□□ -0.34
CLTC-215ENST00000621829 HNRNPH2P55795 449 aaKnown RBP12.93□□□□□ -0.34
CLTC-215ENST00000621829 CAVIN4Q5BKX8 364 aa12.93□□□□□ -0.34
CLTC-215ENST00000621829 SLF1Q9BQI6 1058 aa12.93□□□□□ -0.34
CLTC-215ENST00000621829 ELP1O95163 1332 aa12.93□□□□□ -0.34
CLTC-215ENST00000621829 RAD50Q92878 1312 aa12.93□□□□□ -0.34
CLTC-215ENST00000621829 NBPF7P0C2Y1 421 aaPredicted RBP12.93□□□□□ -0.34
CLTC-215ENST00000621829 ADKP55263 362 aaKnown RBP12.93□□□□□ -0.34
CLTC-215ENST00000621829 LRMPQ12912 555 aa12.93□□□□□ -0.34
CLTC-215ENST00000621829 CCDC92Q53HC0 331 aaPredicted RBP12.93□□□□□ -0.34
CLTC-215ENST00000621829 HSP90AA5PQ58FG0 334 aa12.93□□□□□ -0.34
CLTC-215ENST00000621829 MCTP2Q6DN12 878 aa12.93□□□□□ -0.34
CLTC-215ENST00000621829 HDAC1Q13547 482 aaPredicted RBP12.93□□□□□ -0.34
CLTC-215ENST00000621829 NPHP3Q7Z494 1330 aa12.93□□□□□ -0.34
CLTC-215ENST00000621829 TROVE2P10155 538 aaKnown RBP eCLIP12.93□□□□□ -0.342e-13■□□□□ 10.7
CLTC-215ENST00000621829 APOBRQ0VD83 1088 aa12.93□□□□□ -0.34
CLTC-215ENST00000621829 ATP2A3Q93084 1043 aa12.92□□□□□ -0.34
CLTC-215ENST00000621829 YIPF3Q9GZM5 350 aa12.92□□□□□ -0.34
CLTC-215ENST00000621829 BICDL1Q6ZP65 573 aa12.92□□□□□ -0.34
CLTC-215ENST00000621829 PIP4K2CQ8TBX8 421 aa12.92□□□□□ -0.34
CLTC-215ENST00000621829 IFIT1BQ5T764 474 aaKnown RBP12.92□□□□□ -0.34
CLTC-215ENST00000621829 EHMT1Q9H9B1 1298 aa12.92□□□□□ -0.34
CLTC-215ENST00000621829 SYNRGQ9UMZ2 1314 aa12.92□□□□□ -0.34
CLTC-215ENST00000621829 EFCAB8A8MWE9 144 aa12.92□□□□□ -0.34
CLTC-215ENST00000621829 TBC1D8BQ0IIM8 1120 aa12.92□□□□□ -0.34
CLTC-215ENST00000621829 PPP2R5DQ14738 602 aa12.92□□□□□ -0.34
CLTC-215ENST00000621829 CEP70Q8NHQ1 597 aa12.92□□□□□ -0.34
CLTC-215ENST00000621829 PPP1R42Q7Z4L9 355 aa12.92□□□□□ -0.34
CLTC-215ENST00000621829 CCDC13Q8IYE1 715 aa12.92□□□□□ -0.34
CLTC-215ENST00000621829 UBL4BQ8N7F7 174 aa12.92□□□□□ -0.34
CLTC-215ENST00000621829 USP6NLQ92738 828 aa12.92□□□□□ -0.34
CLTC-215ENST00000621829 TRPA1O75762 1119 aa12.91□□□□□ -0.34
CLTC-215ENST00000621829 BMP15O95972 392 aa12.91□□□□□ -0.34
CLTC-215ENST00000621829 KRT5P13647 590 aa12.91□□□□□ -0.34
CLTC-215ENST00000621829 KRT9P35527 623 aa12.91□□□□□ -0.34
CLTC-215ENST00000621829 FAM133BQ5BKY9 247 aaKnown RBP12.91□□□□□ -0.34
CLTC-215ENST00000621829 ANKRD50Q9ULJ7 1429 aa12.91□□□□□ -0.34
CLTC-215ENST00000621829 KIF21BO75037 1637 aa12.91□□□□□ -0.34
CLTC-215ENST00000621829 ANKRD65E5RJM6 399 aa12.91□□□□□ -0.34
CLTC-215ENST00000621829 ARHGAP6O43182 974 aa12.91□□□□□ -0.34
CLTC-215ENST00000621829 MAP3K21Q5TCX8 1036 aa12.91□□□□□ -0.34
CLTC-215ENST00000621829 MED4Q9NPJ6 270 aa12.91□□□□□ -0.34
CLTC-215ENST00000621829 TRIM14Q14142 442 aa12.91□□□□□ -0.34
CLTC-215ENST00000621829 FAM212AQ96EL1 285 aa12.91□□□□□ -0.34
CLTC-215ENST00000621829 SAR1BQ9Y6B6 198 aa12.91□□□□□ -0.34
CLTC-215ENST00000621829 SLC4A7Q9Y6M7 1214 aa12.91□□□□□ -0.34
CLTC-215ENST00000621829 PTPRCP08575 1304 aa12.91□□□□□ -0.34
CLTC-215ENST00000621829 KRT10P13645 584 aa12.91□□□□□ -0.34
CLTC-215ENST00000621829 CREB3O43889 395 aa12.91□□□□□ -0.34
CLTC-215ENST00000621829 DNAJC8O75937 253 aaPredicted RBP12.91□□□□□ -0.34
CLTC-215ENST00000621829 RPGRQ92834 1020 aaKnown RBP12.91□□□□□ -0.34
CLTC-215ENST00000621829 SAAL1Q96ER3 474 aa12.91□□□□□ -0.34
CLTC-215ENST00000621829 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.91□□□□□ -0.34
CLTC-215ENST00000621829 CSRNP2Q9H175 543 aa12.91□□□□□ -0.34
CLTC-215ENST00000621829 NUB1Q9Y5A7 615 aa12.91□□□□□ -0.34
CLTC-215ENST00000621829 TRIM75PA6NK02 468 aa12.9□□□□□ -0.34
CLTC-215ENST00000621829 HOMEZQ8IX15 550 aa12.9□□□□□ -0.34
CLTC-215ENST00000621829 SCINQ9Y6U3 715 aa12.9□□□□□ -0.34
CLTC-215ENST00000621829 MROH2BQ7Z745 1585 aa12.9□□□□□ -0.34
CLTC-215ENST00000621829 PDE1AP54750 535 aa12.9□□□□□ -0.34
CLTC-215ENST00000621829 ASIC2Q16515 512 aa12.9□□□□□ -0.34
CLTC-215ENST00000621829 DESI2Q9BSY9 194 aa12.9□□□□□ -0.34
CLTC-215ENST00000621829 A0A087WUV0 522 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms