RNA–Protein interactions for RNA: ENST00000620739.4

TP53-226, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-226ENST00000620739 TNRC6CQ9HCJ0 1690 aaKnown RBP13.39□□□□□ -0.27
TP53-226ENST00000620739 GRAPQ13588 217 aa13.39□□□□□ -0.27
TP53-226ENST00000620739 OLFM4Q6UX06 510 aa13.39□□□□□ -0.27
TP53-226ENST00000620739 GRAPLQ8TC17 118 aaPredicted RBP13.39□□□□□ -0.27
TP53-226ENST00000620739 ZNF384Q8TF68 577 aa13.39□□□□□ -0.27
TP53-226ENST00000620739 RPGRQ92834 1020 aaKnown RBP13.39□□□□□ -0.27
TP53-226ENST00000620739 AIDAQ96BJ3 306 aa13.39□□□□□ -0.27
TP53-226ENST00000620739 STRBPQ96SI9 672 aaKnown RBP13.39□□□□□ -0.27
TP53-226ENST00000620739 NSFL1CQ9UNZ2 370 aaKnown RBP13.39□□□□□ -0.27
TP53-226ENST00000620739 UBR3Q6ZT12 1888 aa13.39□□□□□ -0.27
TP53-226ENST00000620739 SMIM22K7EJ46 135 aa13.38□□□□□ -0.27
TP53-226ENST00000620739 BAG4O95429 457 aaKnown RBP13.38□□□□□ -0.27
TP53-226ENST00000620739 TERF1P54274 439 aa13.38□□□□□ -0.27
TP53-226ENST00000620739 NUCB2P80303 420 aa13.38□□□□□ -0.27
TP53-226ENST00000620739 CHAF1AQ13111 956 aaPredicted RBP13.38□□□□□ -0.27
TP53-226ENST00000620739 EZH2Q15910 746 aaKnown RBP13.38□□□□□ -0.27
TP53-226ENST00000620739 ZSCAN25Q6NSZ9 544 aa13.38□□□□□ -0.27
TP53-226ENST00000620739 FBXO33Q7Z6M2 555 aa13.38□□□□□ -0.27
TP53-226ENST00000620739 NBPF3Q9H094 633 aa13.38□□□□□ -0.27
TP53-226ENST00000620739 RAI14Q9P0K7 980 aa13.38□□□□□ -0.27
TP53-226ENST00000620739 MAFGO15525 162 aa13.38□□□□□ -0.27
TP53-226ENST00000620739 XRCC6P12956 609 aaKnown RBP eCLIP13.38□□□□□ -0.27
TP53-226ENST00000620739 HIBADHP31937 336 aaKnown RBP13.38□□□□□ -0.27
TP53-226ENST00000620739 KRT32Q14532 448 aa13.38□□□□□ -0.27
TP53-226ENST00000620739 LCORLQ8N3X6 602 aa13.38□□□□□ -0.27
TP53-226ENST00000620739 ST5P78524 1137 aa13.37□□□□□ -0.27
TP53-226ENST00000620739 CRY2Q49AN0 593 aa13.37□□□□□ -0.27
TP53-226ENST00000620739 MCTP1Q6DN14 999 aa13.37□□□□□ -0.27
TP53-226ENST00000620739 PDGFDQ9GZP0 370 aaPredicted RBP13.37□□□□□ -0.27
TP53-226ENST00000620739 LAMB2P55268 1798 aa13.37□□□□□ -0.27
TP53-226ENST00000620739 COL24A1Q17RW2 1714 aa13.37□□□□□ -0.27
TP53-226ENST00000620739 ZNF213O14771 459 aa13.37□□□□□ -0.27
TP53-226ENST00000620739 ZMYND10O75800 440 aa13.37□□□□□ -0.27
TP53-226ENST00000620739 CYP7A1P22680 504 aa13.37□□□□□ -0.27
TP53-226ENST00000620739 PRDX5P30044 214 aa13.37□□□□□ -0.27
TP53-226ENST00000620739 IMMTQ16891 758 aaKnown RBP13.37□□□□□ -0.27
TP53-226ENST00000620739 DHX32Q7L7V1 743 aaKnown RBP13.37□□□□□ -0.27
TP53-226ENST00000620739 EPB41L4AQ9HCS5 686 aaPredicted RBP13.37□□□□□ -0.27
TP53-226ENST00000620739 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.36□□□□□ -0.27
TP53-226ENST00000620739 MMP10P09238 476 aa13.36□□□□□ -0.27
TP53-226ENST00000620739 GJB2P29033 226 aa13.36□□□□□ -0.27
TP53-226ENST00000620739 GPSM2P81274 684 aa13.36□□□□□ -0.27
TP53-226ENST00000620739 APOBRQ0VD83 1088 aa13.36□□□□□ -0.27
TP53-226ENST00000620739 GNL3LQ9NVN8 582 aaKnown RBP13.36□□□□□ -0.27
TP53-226ENST00000620739 SMC3Q9UQE7 1217 aa13.36□□□□□ -0.27
TP53-226ENST00000620739 PNPLA7Q6ZV29 1317 aa13.36□□□□□ -0.27
TP53-226ENST00000620739 TRAK2O60296 914 aa13.36□□□□□ -0.27
TP53-226ENST00000620739 BRD1O95696 1058 aa13.36□□□□□ -0.27
TP53-226ENST00000620739 EXOSC10Q01780 885 aaKnown RBP13.36□□□□□ -0.27
TP53-226ENST00000620739 NBPF11Q86T75 865 aa13.36□□□□□ -0.27
TP53-226ENST00000620739 TBC1D10CQ8IV04 446 aa13.36□□□□□ -0.27
TP53-226ENST00000620739 SDR42E1Q8WUS8 393 aa13.36□□□□□ -0.27
TP53-226ENST00000620739 GBP4Q96PP9 640 aa13.36□□□□□ -0.27
TP53-226ENST00000620739 ANKRD2Q9GZV1 360 aa13.36□□□□□ -0.27
TP53-226ENST00000620739 GSG1L2A8MUP6 293 aa13.35□□□□□ -0.27
TP53-226ENST00000620739 SYT1P21579 422 aa13.35□□□□□ -0.27
TP53-226ENST00000620739 DYNLL1P63167 89 aaKnown RBP13.35□□□□□ -0.27
TP53-226ENST00000620739 RAB11FIP4Q86YS3 637 aa13.35□□□□□ -0.27
TP53-226ENST00000620739 TACC3Q9Y6A5 838 aa13.35□□□□□ -0.27
TP53-226ENST00000620739 ZNF500O60304 480 aaPredicted RBP13.35□□□□□ -0.27
TP53-226ENST00000620739 JAK2O60674 1132 aa13.35□□□□□ -0.27
TP53-226ENST00000620739 CTDSPL2Q05D32 466 aa13.35□□□□□ -0.27
TP53-226ENST00000620739 NCOA5Q9HCD5 579 aaKnown RBP13.35□□□□□ -0.27
TP53-226ENST00000620739 CTNNA3Q9UI47 895 aa13.35□□□□□ -0.27
TP53-226ENST00000620739 IRS2Q9Y4H2 1338 aa13.35□□□□□ -0.27
TP53-226ENST00000620739 CCT2P78371 535 aaKnown RBP13.34□□□□□ -0.27
TP53-226ENST00000620739 GRIK5Q16478 980 aa13.34□□□□□ -0.27
TP53-226ENST00000620739 DEFB132Q7Z7B7 95 aa13.34□□□□□ -0.27
TP53-226ENST00000620739 IFNL3Q8IZI9 196 aa13.34□□□□□ -0.27
TP53-226ENST00000620739 NLGN1Q8N2Q7 840 aa13.34□□□□□ -0.27
TP53-226ENST00000620739 ZSCAN31Q96LW9 406 aaPredicted RBP13.34□□□□□ -0.27
TP53-226ENST00000620739 GDPD2Q9HCC8 539 aa13.34□□□□□ -0.27
TP53-226ENST00000620739 SH2B1Q9NRF2 756 aaPredicted RBP13.34□□□□□ -0.27
TP53-226ENST00000620739 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.34□□□□□ -0.27
TP53-226ENST00000620739 SLC4A4Q9Y6R1 1079 aa13.34□□□□□ -0.27
TP53-226ENST00000620739 CASZ1Q86V15 1759 aa13.34□□□□□ -0.27
TP53-226ENST00000620739 STK25O00506 426 aa13.34□□□□□ -0.27
TP53-226ENST00000620739 EVX2Q03828 476 aa13.34□□□□□ -0.27
TP53-226ENST00000620739 WDR70Q9NW82 654 aa13.34□□□□□ -0.27
TP53-226ENST00000620739 ANTXR2P58335 489 aa13.33□□□□□ -0.27
TP53-226ENST00000620739 MECOMQ03112 1051 aa13.33□□□□□ -0.27
TP53-226ENST00000620739 SCRN1Q12765 414 aa13.33□□□□□ -0.27
TP53-226ENST00000620739 POLLQ9UGP5 575 aa13.33□□□□□ -0.27
TP53-226ENST00000620739 TTC36A6NLP5 189 aa13.33□□□□□ -0.28
TP53-226ENST00000620739 UFL1O94874 794 aa13.33□□□□□ -0.28
TP53-226ENST00000620739 ANKRD1Q15327 319 aa13.33□□□□□ -0.28
TP53-226ENST00000620739 DDX11Q96FC9 970 aa13.33□□□□□ -0.28
TP53-226ENST00000620739 B4E1Z4 1266 aa13.32□□□□□ -0.28
TP53-226ENST00000620739 CYB5R4Q7L1T6 521 aa13.32□□□□□ -0.28
TP53-226ENST00000620739 RBM17Q96I25 401 aaKnown RBP13.32□□□□□ -0.28
TP53-226ENST00000620739 PANK2Q9BZ23 570 aa13.32□□□□□ -0.28
TP53-226ENST00000620739 NAPBQ9H115 298 aa13.32□□□□□ -0.28
TP53-226ENST00000620739 ALDH8A1Q9H2A2 487 aaPredicted RBP13.32□□□□□ -0.28
TP53-226ENST00000620739 SENP2Q9HC62 589 aa13.32□□□□□ -0.28
TP53-226ENST00000620739 XDHP47989 1333 aa13.32□□□□□ -0.28
TP53-226ENST00000620739 CYP2D7A0A087X1C5 515 aa13.32□□□□□ -0.28
TP53-226ENST00000620739 PRC1O43663 620 aa13.32□□□□□ -0.28
TP53-226ENST00000620739 STX6O43752 255 aa13.32□□□□□ -0.28
TP53-226ENST00000620739 PRPF40AO75400 957 aaKnown RBP13.32□□□□□ -0.28
TP53-226ENST00000620739 SLC4A8Q2Y0W8 1093 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms