RNA–Protein interactions for RNA: ENST00000620536.4

ATXN3-252, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-252ENST00000620536 DCAF15Q66K64 600 aa29.72■■■□□ 2.35
ATXN3-252ENST00000620536 CDC42EP5Q6NZY7 148 aa29.72■■■□□ 2.35
ATXN3-252ENST00000620536 OTOFQ9HC10 1997 aa29.72■■■□□ 2.35
ATXN3-252ENST00000620536 MVPQ14764 893 aaKnown RBP29.71■■■□□ 2.35
ATXN3-252ENST00000620536 FAM151AQ8WW52 585 aa29.71■■■□□ 2.35
ATXN3-252ENST00000620536 CNKSR2Q8WXI2 1034 aa29.71■■■□□ 2.35
ATXN3-252ENST00000620536 OTUD5Q96G74 571 aa29.71■■■□□ 2.35
ATXN3-252ENST00000620536 XAGE2Q96GT9 111 aa29.71■■■□□ 2.35
ATXN3-252ENST00000620536 WRNIP1Q96S55 665 aa29.71■■■□□ 2.35
ATXN3-252ENST00000620536 HPS5Q9UPZ3 1129 aa29.71■■■□□ 2.35
ATXN3-252ENST00000620536 RPAP1Q9BWH6 1393 aaPredicted RBP29.7■■■□□ 2.35
ATXN3-252ENST00000620536 GTF2A2P52657 109 aa29.7■■■□□ 2.35
ATXN3-252ENST00000620536 TMEM57Q8N5G2 664 aa29.7■■■□□ 2.35
ATXN3-252ENST00000620536 MS4A4AQ96JQ5 239 aa29.7■■■□□ 2.35
ATXN3-252ENST00000620536 NEUROD6Q96NK8 337 aa29.7■■■□□ 2.35
ATXN3-252ENST00000620536 PTPN18Q99952 460 aa29.7■■■□□ 2.35
ATXN3-252ENST00000620536 USP40Q9NVE5 1235 aa29.7■■■□□ 2.35
ATXN3-252ENST00000620536 LAMB1P07942 1786 aa29.69■■■□□ 2.34
ATXN3-252ENST00000620536 TCP10Q12799 353 aa29.69■■■□□ 2.34
ATXN3-252ENST00000620536 G3BP1Q13283 466 aaKnown RBP eCLIP29.69■■■□□ 2.34
ATXN3-252ENST00000620536 RASGRF1Q13972 1273 aa29.69■■■□□ 2.34
ATXN3-252ENST00000620536 CRHR2Q13324 411 aa29.68■■■□□ 2.34
ATXN3-252ENST00000620536 SPTY2D1Q68D10 685 aaPredicted RBP29.68■■■□□ 2.34
ATXN3-252ENST00000620536 FBXO46Q6PJ61 603 aaPredicted RBP29.68■■■□□ 2.34
ATXN3-252ENST00000620536 MIGA2Q7L4E1 593 aa29.68■■■□□ 2.34
ATXN3-252ENST00000620536 DZIP1Q86YF9 867 aaKnown RBP29.68■■■□□ 2.34
ATXN3-252ENST00000620536 ZKSCAN4Q969J2 545 aaPredicted RBP29.68■■■□□ 2.34
ATXN3-252ENST00000620536 ZNF341Q9BYN7 854 aa29.68■■■□□ 2.34
ATXN3-252ENST00000620536 ABCF2Q9UG63 623 aa29.68■■■□□ 2.34
ATXN3-252ENST00000620536 PDS5AQ29RF7 1337 aaKnown RBP29.68■■■□□ 2.34
ATXN3-252ENST00000620536 CCL15-CCL14A0A0B4J2E2 113 aa29.67■■■□□ 2.34
ATXN3-252ENST00000620536 SPDYE5A6NIY4 337 aa29.67■■■□□ 2.34
ATXN3-252ENST00000620536 SOX10P56693 466 aa29.67■■■□□ 2.34
ATXN3-252ENST00000620536 CCL15Q16663 113 aa29.67■■■□□ 2.34
ATXN3-252ENST00000620536 GORABQ5T7V8 394 aa29.67■■■□□ 2.34
ATXN3-252ENST00000620536 ERO1BQ86YB8 467 aa29.67■■■□□ 2.34
ATXN3-252ENST00000620536 SLF2Q8IX21 1173 aa29.67■■■□□ 2.34
ATXN3-252ENST00000620536 SNCAIPQ9Y6H5 919 aa29.67■■■□□ 2.34
ATXN3-252ENST00000620536 PNMA6EA0A0J9YXQ4 647 aa29.66■■■□□ 2.34
ATXN3-252ENST00000620536 FTSJ3Q8IY81 847 aaKnown RBP29.66■■■□□ 2.34
ATXN3-252ENST00000620536 NFIAQ12857 509 aa29.65■■■□□ 2.34
ATXN3-252ENST00000620536 BRI3BPQ8WY22 251 aa29.65■■■□□ 2.34
ATXN3-252ENST00000620536 ERO1AQ96HE7 468 aa29.64■■■□□ 2.34
ATXN3-252ENST00000620536 FAM198AQ9UFP1 575 aa29.63■■■□□ 2.33
ATXN3-252ENST00000620536 TRIM17Q9Y577 477 aa29.63■■■□□ 2.33
ATXN3-252ENST00000620536 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.63■■■□□ 2.33
ATXN3-252ENST00000620536 CETPP11597 493 aa29.62■■■□□ 2.33
ATXN3-252ENST00000620536 GAKO14976 1311 aa29.62■■■□□ 2.33
ATXN3-252ENST00000620536 WDHD1O75717 1129 aaPredicted RBP29.61■■■□□ 2.33
ATXN3-252ENST00000620536 SP3Q02447 781 aa29.61■■■□□ 2.33
ATXN3-252ENST00000620536 PPIL2Q13356 520 aa29.61■■■□□ 2.33
ATXN3-252ENST00000620536 SNAPC2Q13487 334 aa29.61■■■□□ 2.33
ATXN3-252ENST00000620536 TAF1CQ15572 869 aaPredicted RBP29.61■■■□□ 2.33
ATXN3-252ENST00000620536 ERICH6Q7L0X2 663 aa29.61■■■□□ 2.33
ATXN3-252ENST00000620536 ZFYVE28Q9HCC9 887 aa29.61■■■□□ 2.33
ATXN3-252ENST00000620536 INPP5BP32019 993 aa29.6■■■□□ 2.33
ATXN3-252ENST00000620536 ITPRIPQ8IWB1 547 aa29.6■■■□□ 2.33
ATXN3-252ENST00000620536 SPATA5Q8NB90 893 aa29.6■■■□□ 2.33
ATXN3-252ENST00000620536 FAM163AQ96GL9 167 aaPredicted RBP29.6■■■□□ 2.33
ATXN3-252ENST00000620536 IRF6O14896 467 aa29.59■■■□□ 2.33
ATXN3-252ENST00000620536 ENTPD3O75355 529 aa29.59■■■□□ 2.33
ATXN3-252ENST00000620536 RGS3P49796 1198 aa29.59■■■□□ 2.33
ATXN3-252ENST00000620536 PPATQ06203 517 aa29.59■■■□□ 2.33
ATXN3-252ENST00000620536 OS9Q13438 667 aaPredicted RBP29.59■■■□□ 2.33
ATXN3-252ENST00000620536 OTOP1Q7RTM1 612 aa29.59■■■□□ 2.33
ATXN3-252ENST00000620536 FAM43AQ8N2R8 423 aa29.59■■■□□ 2.33
ATXN3-252ENST00000620536 CD99L2Q8TCZ2 262 aa29.59■■■□□ 2.33
ATXN3-252ENST00000620536 IDI2Q9BXS1 227 aa29.59■■■□□ 2.33
ATXN3-252ENST00000620536 HMG20BQ9P0W2 317 aa29.59■■■□□ 2.33
ATXN3-252ENST00000620536 ZNF112Q9UJU3 913 aa29.59■■■□□ 2.33
ATXN3-252ENST00000620536 ATP8B2P98198 1209 aa29.58■■■□□ 2.33
ATXN3-252ENST00000620536 MECOMQ03112 1051 aa29.58■■■□□ 2.33
ATXN3-252ENST00000620536 POLA2Q14181 598 aa29.58■■■□□ 2.33
ATXN3-252ENST00000620536 ZBED9Q6R2W3 1325 aa29.58■■■□□ 2.33
ATXN3-252ENST00000620536 ZFPM1Q8IX07 1006 aa29.58■■■□□ 2.33
ATXN3-252ENST00000620536 MROH7-TTC4A0A0A0MT08 1334 aa29.57■■■□□ 2.32
ATXN3-252ENST00000620536 BTDP43251 543 aa29.57■■■□□ 2.32
ATXN3-252ENST00000620536 ZSCAN29Q8IWY8 852 aaPredicted RBP29.57■■■□□ 2.32
ATXN3-252ENST00000620536 SSH3Q8TE77 659 aa29.57■■■□□ 2.32
ATXN3-252ENST00000620536 UQCRFS1P1P0C7P4 283 aa29.56■■■□□ 2.32
ATXN3-252ENST00000620536 ARID4AP29374 1257 aaPredicted RBP29.56■■■□□ 2.32
ATXN3-252ENST00000620536 GSTO1P78417 241 aa29.56■■■□□ 2.32
ATXN3-252ENST00000620536 C1orf115Q9H7X2 142 aa29.56■■■□□ 2.32
ATXN3-252ENST00000620536 EFCC1Q9HA90 598 aa29.56■■■□□ 2.32
ATXN3-252ENST00000620536 LDHCP07864 332 aa29.55■■■□□ 2.32
ATXN3-252ENST00000620536 PI16Q6UXB8 463 aa29.55■■■□□ 2.32
ATXN3-252ENST00000620536 ZCCHC17Q9NP64 241 aaKnown RBP29.55■■■□□ 2.32
ATXN3-252ENST00000620536 MYH2Q9UKX2 1941 aa29.55■■■□□ 2.32
ATXN3-252ENST00000620536 BTBD19C9JJ37 291 aa29.54■■■□□ 2.32
ATXN3-252ENST00000620536 ZBTB7BO15156 539 aaPredicted RBP29.54■■■□□ 2.32
ATXN3-252ENST00000620536 SURF6O75683 361 aaKnown RBP29.54■■■□□ 2.32
ATXN3-252ENST00000620536 ARHGEF6Q15052 776 aa29.54■■■□□ 2.32
ATXN3-252ENST00000620536 TBC1D9Q6ZT07 1266 aa29.54■■■□□ 2.32
ATXN3-252ENST00000620536 GPR108Q9NPR9 543 aa29.54■■■□□ 2.32
ATXN3-252ENST00000620536 RAI14Q9P0K7 980 aa29.54■■■□□ 2.32
ATXN3-252ENST00000620536 GPR75-ASB3A0A0A6YYF3 556 aa29.53■■■□□ 2.32
ATXN3-252ENST00000620536 RLBP1P12271 317 aa29.53■■■□□ 2.32
ATXN3-252ENST00000620536 PICALMQ13492 652 aa29.53■■■□□ 2.32
ATXN3-252ENST00000620536 NOL9Q5SY16 702 aaKnown RBP29.53■■■□□ 2.32
ATXN3-252ENST00000620536 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms