RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 CCDC150Q8NCX0 1101 aa11.44□□□□□ -0.58
CDH23-213ENST00000619887 SMARCC2Q8TAQ2 1214 aa11.44□□□□□ -0.58
CDH23-213ENST00000619887 ADAMTSL3P82987 1691 aa11.44□□□□□ -0.58
CDH23-213ENST00000619887 LOC102724428A0A0B4J2F2 783 aa11.44□□□□□ -0.58
CDH23-213ENST00000619887 CYP19A1P11511 503 aaPredicted RBP11.44□□□□□ -0.58
CDH23-213ENST00000619887 USP5P45974 858 aa11.44□□□□□ -0.58
CDH23-213ENST00000619887 SIK1P57059 783 aa11.44□□□□□ -0.58
CDH23-213ENST00000619887 RBM10P98175 930 aaKnown RBP11.44□□□□□ -0.58
CDH23-213ENST00000619887 CFAP100Q494V2 611 aa11.44□□□□□ -0.58
CDH23-213ENST00000619887 AKNAD1Q5T1N1 836 aa11.44□□□□□ -0.58
CDH23-213ENST00000619887 AOPEPQ8N6M6 819 aa11.44□□□□□ -0.58
CDH23-213ENST00000619887 FBXO18Q8NFZ0 1043 aa11.44□□□□□ -0.58
CDH23-213ENST00000619887 NOC3LQ8WTT2 800 aaKnown RBP11.44□□□□□ -0.58
CDH23-213ENST00000619887 IFIT1BQ5T764 474 aaKnown RBP11.44□□□□□ -0.58
CDH23-213ENST00000619887 PYM1Q9BRP8 204 aaKnown RBP11.44□□□□□ -0.58
CDH23-213ENST00000619887 RTEL1Q9NZ71 1219 aa11.44□□□□□ -0.58
CDH23-213ENST00000619887 IQSEC3Q9UPP2 1182 aaPredicted RBP11.44□□□□□ -0.58
CDH23-213ENST00000619887 A0A1W2PQ27 194 aa11.43□□□□□ -0.58
CDH23-213ENST00000619887 A0A1W2PQ64 194 aa11.43□□□□□ -0.58
CDH23-213ENST00000619887 A0A1W2PQD8 194 aa11.43□□□□□ -0.58
CDH23-213ENST00000619887 BIN1O00499 593 aa11.43□□□□□ -0.58
CDH23-213ENST00000619887 CSF1RP07333 972 aa11.43□□□□□ -0.58
CDH23-213ENST00000619887 MARCKSP29966 332 aaPredicted RBP11.43□□□□□ -0.58
CDH23-213ENST00000619887 ZNF75DP51815 510 aa11.43□□□□□ -0.58
CDH23-213ENST00000619887 HLFQ16534 295 aa11.43□□□□□ -0.58
CDH23-213ENST00000619887 CCDC178Q5BJE1 867 aa11.43□□□□□ -0.58
CDH23-213ENST00000619887 TPTE2Q6XPS3 522 aa11.43□□□□□ -0.58
CDH23-213ENST00000619887 PDILTQ8N807 584 aa11.43□□□□□ -0.58
CDH23-213ENST00000619887 MIGA1Q8NAN2 632 aa11.43□□□□□ -0.58
CDH23-213ENST00000619887 C8orf37Q96NL8 207 aa11.43□□□□□ -0.58
CDH23-213ENST00000619887 A0A1B0GVL5 298 aa11.43□□□□□ -0.58
CDH23-213ENST00000619887 CRKLP46109 303 aaKnown RBP11.43□□□□□ -0.58
CDH23-213ENST00000619887 PTPN14Q15678 1187 aa11.43□□□□□ -0.58
CDH23-213ENST00000619887 IFNL3Q8IZI9 196 aa11.43□□□□□ -0.58
CDH23-213ENST00000619887 CCDC43Q96MW1 224 aaKnown RBP11.43□□□□□ -0.58
CDH23-213ENST00000619887 ANKIB1Q9P2G1 1089 aa11.43□□□□□ -0.58
CDH23-213ENST00000619887 COL5A2P05997 1499 aaPredicted RBP11.43□□□□□ -0.58
CDH23-213ENST00000619887 DEXIO95424 95 aa11.43□□□□□ -0.58
CDH23-213ENST00000619887 KRT40Q6A162 431 aa11.43□□□□□ -0.58
CDH23-213ENST00000619887 PUS7LQ9H0K6 701 aaKnown RBP11.43□□□□□ -0.58
CDH23-213ENST00000619887 BAG3O95817 575 aa11.43□□□□□ -0.58
CDH23-213ENST00000619887 PTGS1P23219 599 aa11.43□□□□□ -0.58
CDH23-213ENST00000619887 GSTO1P78417 241 aa11.43□□□□□ -0.58
CDH23-213ENST00000619887 RILPL1Q5EBL4 403 aa11.43□□□□□ -0.58
CDH23-213ENST00000619887 MRVI1Q9Y6F6 885 aa11.43□□□□□ -0.58
CDH23-213ENST00000619887 TNNT1P13805 278 aa11.42□□□□□ -0.58
CDH23-213ENST00000619887 RXRAP19793 462 aa11.42□□□□□ -0.58
CDH23-213ENST00000619887 OTUD7BQ6GQQ9 843 aa11.42□□□□□ -0.58
CDH23-213ENST00000619887 MKNK2Q9HBH9 465 aa11.42□□□□□ -0.58
CDH23-213ENST00000619887 RBM28Q9NW13 759 aaKnown RBP11.42□□□□□ -0.58
CDH23-213ENST00000619887 MCAMP43121 646 aa11.42□□□□□ -0.58
CDH23-213ENST00000619887 EXOSC10Q01780 885 aaKnown RBP11.42□□□□□ -0.58
CDH23-213ENST00000619887 KRI1Q8N9T8 703 aaKnown RBP11.42□□□□□ -0.58
CDH23-213ENST00000619887 SMARCE1Q969G3 411 aa11.42□□□□□ -0.58
CDH23-213ENST00000619887 TSPY2A6NKD2 308 aa11.42□□□□□ -0.58
CDH23-213ENST00000619887 CUTAO60888 179 aa11.42□□□□□ -0.58
CDH23-213ENST00000619887 SLF2Q8IX21 1173 aa11.42□□□□□ -0.58
CDH23-213ENST00000619887 TDRD7Q8NHU6 1098 aaKnown RBP11.42□□□□□ -0.58
CDH23-213ENST00000619887 PDCL3Q9H2J4 239 aa11.42□□□□□ -0.58
CDH23-213ENST00000619887 STOX1Q6ZVD7 989 aa11.41□□□□□ -0.58
CDH23-213ENST00000619887 MNS1Q8NEH6 495 aa11.41□□□□□ -0.58
CDH23-213ENST00000619887 ZNF512BQ96KM6 892 aaPredicted RBP11.41□□□□□ -0.58
CDH23-213ENST00000619887 POLR3EQ9NVU0 708 aa11.41□□□□□ -0.58
CDH23-213ENST00000619887 RIPOR2Q9Y4F9 1068 aa11.41□□□□□ -0.58
CDH23-213ENST00000619887 IPO7O95373 1038 aaKnown RBP11.41□□□□□ -0.58
CDH23-213ENST00000619887 NLRP5P59047 1200 aa11.41□□□□□ -0.58
CDH23-213ENST00000619887 PI16Q6UXB8 463 aa11.41□□□□□ -0.58
CDH23-213ENST00000619887 TMC6Q7Z403 805 aa11.41□□□□□ -0.58
CDH23-213ENST00000619887 RTCBQ9Y3I0 505 aaKnown RBP11.41□□□□□ -0.58
CDH23-213ENST00000619887 PAXBP1Q9Y5B6 917 aa11.41□□□□□ -0.58
CDH23-213ENST00000619887 TRIM75PA6NK02 468 aa11.41□□□□□ -0.58
CDH23-213ENST00000619887 TOP1P11387 765 aaKnown RBP11.41□□□□□ -0.58
CDH23-213ENST00000619887 SOGA3Q5TF21 947 aa11.41□□□□□ -0.58
CDH23-213ENST00000619887 PPFIBP1Q86W92 1011 aa11.41□□□□□ -0.58
CDH23-213ENST00000619887 RFC4P35249 363 aa11.4□□□□□ -0.58
CDH23-213ENST00000619887 STIM1Q13586 685 aa11.4□□□□□ -0.58
CDH23-213ENST00000619887 UBE4AQ14139 1066 aa11.4□□□□□ -0.58
CDH23-213ENST00000619887 SLC4A8Q2Y0W8 1093 aa11.4□□□□□ -0.58
CDH23-213ENST00000619887 ZNF444Q8N0Y2 327 aaPredicted RBP11.4□□□□□ -0.58
CDH23-213ENST00000619887 KIF18AQ8NI77 898 aa11.4□□□□□ -0.58
CDH23-213ENST00000619887 RPGRQ92834 1020 aaKnown RBP11.4□□□□□ -0.58
CDH23-213ENST00000619887 C16orf45Q96MC5 204 aaPredicted RBP11.4□□□□□ -0.58
CDH23-213ENST00000619887 CEP89Q96ST8 783 aa11.4□□□□□ -0.58
CDH23-213ENST00000619887 ZNF202O95125 648 aa11.4□□□□□ -0.58
CDH23-213ENST00000619887 GNAQP50148 359 aa11.4□□□□□ -0.58
CDH23-213ENST00000619887 CTDSPL2Q05D32 466 aa11.4□□□□□ -0.58
CDH23-213ENST00000619887 APOA5Q6Q788 366 aa11.4□□□□□ -0.58
CDH23-213ENST00000619887 KAT14Q9H8E8 782 aa11.4□□□□□ -0.58
CDH23-213ENST00000619887 PCDHA7Q9UN72 937 aa11.4□□□□□ -0.58
CDH23-213ENST00000619887 SH2B2O14492 632 aaPredicted RBP11.4□□□□□ -0.58
CDH23-213ENST00000619887 MB21D2Q8IYB1 491 aaPredicted RBP11.4□□□□□ -0.58
CDH23-213ENST00000619887 PIH1D3Q9NQM4 214 aaKnown RBP11.4□□□□□ -0.58
CDH23-213ENST00000619887 SKILP12757 684 aa11.4□□□□□ -0.59
CDH23-213ENST00000619887 CMA1P23946 247 aa11.4□□□□□ -0.59
CDH23-213ENST00000619887 CHRNDQ07001 517 aa11.4□□□□□ -0.59
CDH23-213ENST00000619887 PHKBQ93100 1093 aa11.4□□□□□ -0.59
CDH23-213ENST00000619887 ARGLU1Q9NWB6 273 aaPredicted RBP11.4□□□□□ -0.59
CDH23-213ENST00000619887 WWC3Q9ULE0 1092 aa11.4□□□□□ -0.59
CDH23-213ENST00000619887 PHRF1Q9P1Y6 1649 aaKnown RBP11.39□□□□□ -0.59
CDH23-213ENST00000619887 PCP11498 1178 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms