RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 CHRNA5P30532 468 aa6.96□□□□□ -1.29
CBWD3-215ENST00000619322 ERFEQ4G0M1 354 aa6.96□□□□□ -1.29
CBWD3-215ENST00000619322 SEZ6LQ9BYH1 1024 aa6.96□□□□□ -1.29
CBWD3-215ENST00000619322 GPR108Q9NPR9 543 aa6.96□□□□□ -1.29
CBWD3-215ENST00000619322 DEFB115Q30KQ5 88 aa6.96□□□□□ -1.3
CBWD3-215ENST00000619322 PLA2G2CQ5R387 149 aa6.96□□□□□ -1.3
CBWD3-215ENST00000619322 DACT2Q5SW24 774 aa6.96□□□□□ -1.3
CBWD3-215ENST00000619322 TRMT44Q8IYL2 757 aaKnown RBP6.96□□□□□ -1.3
CBWD3-215ENST00000619322 KCNH4Q9UQ05 1017 aa6.96□□□□□ -1.3
CBWD3-215ENST00000619322 HDAC5Q9UQL6 1122 aa6.96□□□□□ -1.3
CBWD3-215ENST00000619322 YDJCA8MPS7 323 aa6.96□□□□□ -1.3
CBWD3-215ENST00000619322 DDX58O95786 925 aaKnown RBP6.96□□□□□ -1.3
CBWD3-215ENST00000619322 VEGFBP49765 207 aa6.96□□□□□ -1.3
CBWD3-215ENST00000619322 CCDC152Q4G0S7 254 aa6.96□□□□□ -1.3
CBWD3-215ENST00000619322 MSL1Q68DK7 614 aa6.96□□□□□ -1.3
CBWD3-215ENST00000619322 FAM109BQ6ICB4 259 aaPredicted RBP6.96□□□□□ -1.3
CBWD3-215ENST00000619322 LBX2Q6XYB7 198 aa6.96□□□□□ -1.3
CBWD3-215ENST00000619322 VGLL2Q8N8G2 317 aa6.96□□□□□ -1.3
CBWD3-215ENST00000619322 TANGO6Q9C0B7 1094 aa6.96□□□□□ -1.3
CBWD3-215ENST00000619322 MROH5Q6ZUA9 1318 aa6.96□□□□□ -1.3
CBWD3-215ENST00000619322 TMEM265A0A087WTH1 108 aa6.95□□□□□ -1.3
CBWD3-215ENST00000619322 UBE4AQ14139 1066 aa6.95□□□□□ -1.3
CBWD3-215ENST00000619322 CCDC30Q5VVM6 783 aa6.95□□□□□ -1.3
CBWD3-215ENST00000619322 CNTROBQ8N137 903 aa6.95□□□□□ -1.3
CBWD3-215ENST00000619322 TBC1D16Q8TBP0 767 aa6.95□□□□□ -1.3
CBWD3-215ENST00000619322 NIP7Q9Y221 180 aaKnown RBP eCLIP6.95□□□□□ -1.3
CBWD3-215ENST00000619322 GAKO14976 1311 aa6.95□□□□□ -1.3
CBWD3-215ENST00000619322 HLFQ16534 295 aa6.95□□□□□ -1.3
CBWD3-215ENST00000619322 RTL5Q5HYW3 569 aaPredicted RBP6.95□□□□□ -1.3
CBWD3-215ENST00000619322 PRPF38BQ5VTL8 546 aaKnown RBP6.95□□□□□ -1.3
CBWD3-215ENST00000619322 HELBQ8NG08 1087 aaPredicted RBP6.95□□□□□ -1.3
CBWD3-215ENST00000619322 SYTL4Q96C24 671 aaPredicted RBP6.95□□□□□ -1.3
CBWD3-215ENST00000619322 PKNOX2Q96KN3 472 aa6.95□□□□□ -1.3
CBWD3-215ENST00000619322 PRKRIP1Q9H875 184 aaPredicted RBP6.95□□□□□ -1.3
CBWD3-215ENST00000619322 U2SURPO15042 1029 aaKnown RBP6.94□□□□□ -1.3
CBWD3-215ENST00000619322 FOXN1O15353 648 aa6.94□□□□□ -1.3
CBWD3-215ENST00000619322 ACTN4O43707 911 aaKnown RBP6.94□□□□□ -1.3
CBWD3-215ENST00000619322 CTSWP56202 376 aa6.94□□□□□ -1.3
CBWD3-215ENST00000619322 RGMBQ6NW40 437 aa6.94□□□□□ -1.3
CBWD3-215ENST00000619322 CTU1Q7Z7A3 348 aaKnown RBP6.94□□□□□ -1.3
CBWD3-215ENST00000619322 RPGRQ92834 1020 aaKnown RBP6.94□□□□□ -1.3
CBWD3-215ENST00000619322 AIDAQ96BJ3 306 aa6.94□□□□□ -1.3
CBWD3-215ENST00000619322 THAP11Q96EK4 314 aa6.94□□□□□ -1.3
CBWD3-215ENST00000619322 NRBP1Q9UHY1 535 aa6.94□□□□□ -1.3
CBWD3-215ENST00000619322 LCTP09848 1927 aa6.94□□□□□ -1.3
CBWD3-215ENST00000619322 CFAP99D6REC4 459 aa6.94□□□□□ -1.3
CBWD3-215ENST00000619322 FGFR2P21802 821 aa6.94□□□□□ -1.3
CBWD3-215ENST00000619322 HHIPL2Q6UWX4 724 aa6.94□□□□□ -1.3
CBWD3-215ENST00000619322 FAM160A2Q8N612 972 aaPredicted RBP6.94□□□□□ -1.3
CBWD3-215ENST00000619322 LINS1Q8NG48 757 aa6.94□□□□□ -1.3
CBWD3-215ENST00000619322 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.94□□□□□ -1.3
CBWD3-215ENST00000619322 EMID1Q96A84 441 aaPredicted RBP6.94□□□□□ -1.3
CBWD3-215ENST00000619322 FBLN1P23142 703 aa6.94□□□□□ -1.3
CBWD3-215ENST00000619322 CXCL9Q07325 125 aa6.94□□□□□ -1.3
CBWD3-215ENST00000619322 FBXO46Q6PJ61 603 aaPredicted RBP6.94□□□□□ -1.3
CBWD3-215ENST00000619322 SULF1Q8IWU6 871 aa6.94□□□□□ -1.3
CBWD3-215ENST00000619322 MPNDQ8N594 471 aa6.94□□□□□ -1.3
CBWD3-215ENST00000619322 MAPK8IP3Q9UPT6 1336 aa6.93□□□□□ -1.3
CBWD3-215ENST00000619322 A1BGP04217 495 aa6.93□□□□□ -1.3
CBWD3-215ENST00000619322 NEFMP07197 916 aa6.93□□□□□ -1.3
CBWD3-215ENST00000619322 TBC1D22AQ8WUA7 517 aa6.93□□□□□ -1.3
CBWD3-215ENST00000619322 JDP2Q8WYK2 163 aa6.93□□□□□ -1.3
CBWD3-215ENST00000619322 S1PR4O95977 384 aa6.93□□□□□ -1.3
CBWD3-215ENST00000619322 C1orf53Q5VUE5 145 aa6.93□□□□□ -1.3
CBWD3-215ENST00000619322 TDRD7Q8NHU6 1098 aaKnown RBP6.93□□□□□ -1.3
CBWD3-215ENST00000619322 MYH16Q9H6N6 1097 aa6.93□□□□□ -1.3
CBWD3-215ENST00000619322 LOC102724159A0A0B4J2E5 919 aa6.93□□□□□ -1.3
CBWD3-215ENST00000619322 ARHGEF6Q15052 776 aa6.93□□□□□ -1.3
CBWD3-215ENST00000619322 PWP2Q15269 919 aaKnown RBP6.93□□□□□ -1.3
CBWD3-215ENST00000619322 TEX2Q8IWB9 1127 aa6.93□□□□□ -1.3
CBWD3-215ENST00000619322 CWC25Q9NXE8 425 aaPredicted RBP6.93□□□□□ -1.3
CBWD3-215ENST00000619322 HCSTQ9UBK5 93 aa6.93□□□□□ -1.3
CBWD3-215ENST00000619322 SH3D19Q5HYK7 790 aa6.92□□□□□ -1.3
CBWD3-215ENST00000619322 EPS8L1Q8TE68 723 aa6.92□□□□□ -1.3
CBWD3-215ENST00000619322 CAPNS2Q96L46 248 aa6.92□□□□□ -1.3
CBWD3-215ENST00000619322 FDX1P10109 184 aa6.92□□□□□ -1.3
CBWD3-215ENST00000619322 DDX46Q7L014 1031 aaKnown RBP6.92□□□□□ -1.3
CBWD3-215ENST00000619322 NEURL1BA8MQ27 555 aa6.91□□□□□ -1.3
CBWD3-215ENST00000619322 ANP32CO43423 234 aa6.91□□□□□ -1.3
CBWD3-215ENST00000619322 FOXO4P98177 505 aa6.91□□□□□ -1.3
CBWD3-215ENST00000619322 FBXO33Q7Z6M2 555 aa6.91□□□□□ -1.3
CBWD3-215ENST00000619322 UBE2Q2Q8WVN8 375 aa6.91□□□□□ -1.3
CBWD3-215ENST00000619322 ABHD8Q96I13 439 aa6.91□□□□□ -1.3
CBWD3-215ENST00000619322 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.91□□□□□ -1.3
CBWD3-215ENST00000619322 USP17L3A6NCW0 530 aa6.91□□□□□ -1.3
CBWD3-215ENST00000619322 USP17L4A6NCW7 530 aa6.91□□□□□ -1.3
CBWD3-215ENST00000619322 C21orf2O43822 256 aa6.91□□□□□ -1.3
CBWD3-215ENST00000619322 HIRAP54198 1017 aaPredicted RBP6.91□□□□□ -1.3
CBWD3-215ENST00000619322 USP17L1Q7RTZ2 530 aa6.91□□□□□ -1.3
CBWD3-215ENST00000619322 NUTM1Q86Y26 1132 aa6.91□□□□□ -1.3
CBWD3-215ENST00000619322 TSC1Q92574 1164 aa6.91□□□□□ -1.3
CBWD3-215ENST00000619322 IDI2Q9BXS1 227 aa6.91□□□□□ -1.3
CBWD3-215ENST00000619322 KIAA1671Q9BY89 1806 aa6.91□□□□□ -1.3
CBWD3-215ENST00000619322 KCNQ3O43525 872 aa6.91□□□□□ -1.3
CBWD3-215ENST00000619322 HMX1Q9NP08 348 aaPredicted RBP6.91□□□□□ -1.3
CBWD3-215ENST00000619322 ZSWIM8A7E2V4 1837 aa6.9□□□□□ -1.3
CBWD3-215ENST00000619322 SLC39A6Q13433 755 aa6.9□□□□□ -1.3
CBWD3-215ENST00000619322 TTLL11Q8NHH1 800 aa6.9□□□□□ -1.3
CBWD3-215ENST00000619322 ZDHHC15Q96MV8 337 aa6.9□□□□□ -1.3
CBWD3-215ENST00000619322 MBIPQ9NS73 344 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms