RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 MYH2Q9UKX2 1941 aa11.41□□□□□ -0.58
SYN3-213ENST00000619146 DOCK2Q92608 1830 aa11.4□□□□□ -0.58
SYN3-213ENST00000619146 ANKRD18BA2A2Z9 1011 aa11.4□□□□□ -0.58
SYN3-213ENST00000619146 TESPA1A2RU30 521 aaPredicted RBP11.4□□□□□ -0.58
SYN3-213ENST00000619146 CACNB3P54284 484 aa11.4□□□□□ -0.58
SYN3-213ENST00000619146 VGLL4Q14135 290 aa11.4□□□□□ -0.58
SYN3-213ENST00000619146 CEP85Q6P2H3 762 aa11.4□□□□□ -0.58
SYN3-213ENST00000619146 CENPQQ7L2Z9 268 aaPredicted RBP11.4□□□□□ -0.58
SYN3-213ENST00000619146 ZNF804AQ7Z570 1209 aa11.4□□□□□ -0.58
SYN3-213ENST00000619146 TTF2Q9UNY4 1162 aaKnown RBP11.4□□□□□ -0.58
SYN3-213ENST00000619146 IQSEC3Q9UPP2 1182 aaPredicted RBP11.4□□□□□ -0.58
SYN3-213ENST00000619146 CASP7P55210 303 aa11.39□□□□□ -0.59
SYN3-213ENST00000619146 ATP8B2P98198 1209 aa11.39□□□□□ -0.59
SYN3-213ENST00000619146 MTX1Q13505 466 aa11.39□□□□□ -0.59
SYN3-213ENST00000619146 GRIK5Q16478 980 aa11.39□□□□□ -0.59
SYN3-213ENST00000619146 PLA2G12BQ9BX93 195 aa11.39□□□□□ -0.59
SYN3-213ENST00000619146 ATAD5Q96QE3 1844 aa11.39□□□□□ -0.59
SYN3-213ENST00000619146 PHIPQ8WWQ0 1821 aa11.38□□□□□ -0.59
SYN3-213ENST00000619146 DLL1O00548 723 aa11.38□□□□□ -0.59
SYN3-213ENST00000619146 IL1R1P14778 569 aa11.38□□□□□ -0.59
SYN3-213ENST00000619146 CTGFP29279 349 aa11.38□□□□□ -0.59
SYN3-213ENST00000619146 GYG1P46976 350 aa11.38□□□□□ -0.59
SYN3-213ENST00000619146 MMP14P50281 582 aa11.38□□□□□ -0.59
SYN3-213ENST00000619146 GTF2A2P52657 109 aa11.38□□□□□ -0.59
SYN3-213ENST00000619146 RABL6Q3YEC7 729 aaPredicted RBP11.38□□□□□ -0.59
SYN3-213ENST00000619146 SPDYE2Q495Y8 402 aa11.38□□□□□ -0.59
SYN3-213ENST00000619146 MFSD14BQ5SR56 506 aa11.38□□□□□ -0.59
SYN3-213ENST00000619146 ZKSCAN4Q969J2 545 aaPredicted RBP11.38□□□□□ -0.59
SYN3-213ENST00000619146 SHISA4Q96DD7 197 aa11.38□□□□□ -0.59
SYN3-213ENST00000619146 SUCLG2Q96I99 432 aa11.38□□□□□ -0.59
SYN3-213ENST00000619146 TEPSINQ96N21 525 aa11.38□□□□□ -0.59
SYN3-213ENST00000619146 CSADQ9Y600 493 aa11.38□□□□□ -0.59
SYN3-213ENST00000619146 SRGAP3O43295 1099 aa11.37□□□□□ -0.59
SYN3-213ENST00000619146 CSF1RP07333 972 aa11.37□□□□□ -0.59
SYN3-213ENST00000619146 MAP3K9P80192 1104 aa11.37□□□□□ -0.59
SYN3-213ENST00000619146 LACTBP83111 547 aaPredicted RBP11.37□□□□□ -0.59
SYN3-213ENST00000619146 CHAF1AQ13111 956 aaPredicted RBP11.37□□□□□ -0.59
SYN3-213ENST00000619146 IFIT5Q13325 482 aaKnown RBP11.37□□□□□ -0.59
SYN3-213ENST00000619146 KIF22Q14807 665 aa11.37□□□□□ -0.59
SYN3-213ENST00000619146 TAF7LQ5H9L4 462 aa11.37□□□□□ -0.59
SYN3-213ENST00000619146 EPHA10Q5JZY3 1008 aa11.37□□□□□ -0.59
SYN3-213ENST00000619146 SIRT2Q8IXJ6 389 aa11.37□□□□□ -0.59
SYN3-213ENST00000619146 SLC17A8Q8NDX2 589 aa11.37□□□□□ -0.59
SYN3-213ENST00000619146 BICC1Q9H694 974 aaKnown RBP11.37□□□□□ -0.59
SYN3-213ENST00000619146 CNNM1Q9NRU3 951 aa11.37□□□□□ -0.59
SYN3-213ENST00000619146 CPA4Q9UI42 421 aa11.37□□□□□ -0.59
SYN3-213ENST00000619146 LAMA3Q16787 3333 aa11.37□□□□□ -0.59
SYN3-213ENST00000619146 BTBD19C9JJ37 291 aa11.36□□□□□ -0.59
SYN3-213ENST00000619146 IGHDP01880 384 aa11.36□□□□□ -0.59
SYN3-213ENST00000619146 CRKP46108 304 aa11.36□□□□□ -0.59
SYN3-213ENST00000619146 FOXO4P98177 505 aa11.36□□□□□ -0.59
SYN3-213ENST00000619146 ARHGEF6Q15052 776 aa11.36□□□□□ -0.59
SYN3-213ENST00000619146 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.36□□□□□ -0.59
SYN3-213ENST00000619146 SSH3Q8TE77 659 aa11.36□□□□□ -0.59
SYN3-213ENST00000619146 KAZALD1Q96I82 304 aa11.36□□□□□ -0.59
SYN3-213ENST00000619146 BIN2Q9UBW5 565 aaPredicted RBP11.36□□□□□ -0.59
SYN3-213ENST00000619146 IRF6O14896 467 aa11.35□□□□□ -0.59
SYN3-213ENST00000619146 TLR2O60603 784 aa11.35□□□□□ -0.59
SYN3-213ENST00000619146 TNFAIP1Q13829 316 aa11.35□□□□□ -0.59
SYN3-213ENST00000619146 POLA2Q14181 598 aa11.35□□□□□ -0.59
SYN3-213ENST00000619146 HSP90AB4PQ58FF6 505 aa11.35□□□□□ -0.59
SYN3-213ENST00000619146 LMBR1LQ6UX01 489 aa11.35□□□□□ -0.59
SYN3-213ENST00000619146 MIGA2Q7L4E1 593 aa11.35□□□□□ -0.59
SYN3-213ENST00000619146 SMC5Q8IY18 1101 aa11.35□□□□□ -0.59
SYN3-213ENST00000619146 WRNIP1Q96S55 665 aa11.35□□□□□ -0.59
SYN3-213ENST00000619146 DCTPP1Q9H773 170 aa11.35□□□□□ -0.59
SYN3-213ENST00000619146 SNCAIPQ9Y6H5 919 aa11.35□□□□□ -0.59
SYN3-213ENST00000619146 DOCK1Q14185 1865 aa11.34□□□□□ -0.59
SYN3-213ENST00000619146 UNC80Q8N2C7 3258 aa11.34□□□□□ -0.59
SYN3-213ENST00000619146 PNMA6EA0A0J9YXQ4 647 aa11.34□□□□□ -0.59
SYN3-213ENST00000619146 UNCXA6NJT0 531 aa11.34□□□□□ -0.59
SYN3-213ENST00000619146 PSMC4P43686 418 aa11.34□□□□□ -0.59
SYN3-213ENST00000619146 TNNI2P48788 182 aa11.34□□□□□ -0.59
SYN3-213ENST00000619146 FKBP1AP62942 108 aaKnown RBP11.34□□□□□ -0.59
SYN3-213ENST00000619146 LDHAL6AQ6ZMR3 332 aa11.34□□□□□ -0.59
SYN3-213ENST00000619146 C15orf52Q6ZUT6 534 aaKnown RBP11.34□□□□□ -0.59
SYN3-213ENST00000619146 TRIM47Q96LD4 638 aa11.34□□□□□ -0.59
SYN3-213ENST00000619146 PUS3Q9BZE2 481 aaKnown RBP11.34□□□□□ -0.59
SYN3-213ENST00000619146 CDK5RAP2Q96SN8 1893 aa11.34□□□□□ -0.59
SYN3-213ENST00000619146 DDX60LQ5H9U9 1706 aaKnown RBP11.33□□□□□ -0.6
SYN3-213ENST00000619146 SPDYE5A6NIY4 337 aa11.33□□□□□ -0.6
SYN3-213ENST00000619146 SOX1O00570 391 aaPredicted RBP11.33□□□□□ -0.6
SYN3-213ENST00000619146 RAB11FIP3O75154 756 aa11.33□□□□□ -0.6
SYN3-213ENST00000619146 FMNL1O95466 1100 aaPredicted RBP11.33□□□□□ -0.6
SYN3-213ENST00000619146 CETPP11597 493 aa11.33□□□□□ -0.6
SYN3-213ENST00000619146 CCL5P13501 91 aa11.33□□□□□ -0.6
SYN3-213ENST00000619146 OSBPP22059 807 aa11.33□□□□□ -0.6
SYN3-213ENST00000619146 HIBADHP31937 336 aaKnown RBP11.33□□□□□ -0.6
SYN3-213ENST00000619146 INPP5BP32019 993 aa11.33□□□□□ -0.6
SYN3-213ENST00000619146 CCDC57Q2TAC2 916 aa11.33□□□□□ -0.6
SYN3-213ENST00000619146 TDRD7Q8NHU6 1098 aaKnown RBP11.33□□□□□ -0.6
SYN3-213ENST00000619146 RAET1EQ8TD07 263 aa11.33□□□□□ -0.6
SYN3-213ENST00000619146 LRCH3Q96II8 777 aa11.33□□□□□ -0.6
SYN3-213ENST00000619146 RNF208Q9H0X6 261 aa11.33□□□□□ -0.6
SYN3-213ENST00000619146 ZBTB47Q9UFB7 747 aaPredicted RBP11.33□□□□□ -0.6
SYN3-213ENST00000619146 SERPINA10Q9UK55 444 aa11.33□□□□□ -0.6
SYN3-213ENST00000619146 NOP58Q9Y2X3 529 aaKnown RBP11.33□□□□□ -0.6
SYN3-213ENST00000619146 FAM205AQ6ZU69 1335 aa11.33□□□□□ -0.6
SYN3-213ENST00000619146 MYPNQ86TC9 1320 aa11.33□□□□□ -0.6
SYN3-213ENST00000619146 WDHD1O75717 1129 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms