RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 ABT1Q9ULW3 272 aaKnown RBP10.11□□□□□ -0.79
NEK3-209ENST00000618856 SUPT16HQ9Y5B9 1047 aaKnown RBP10.11□□□□□ -0.79
NEK3-209ENST00000618856 DOCK2Q92608 1830 aa10.11□□□□□ -0.79
NEK3-209ENST00000618856 MROH7-TTC4A0A0A0MT08 1334 aa10.1□□□□□ -0.79
NEK3-209ENST00000618856 WDR33Q9C0J8 1336 aaKnown RBP10.1□□□□□ -0.79
NEK3-209ENST00000618856 ATP5JP18859 108 aa10.1□□□□□ -0.79
NEK3-209ENST00000618856 ZAP70P43403 619 aa10.1□□□□□ -0.79
NEK3-209ENST00000618856 HUNKP57058 714 aa10.1□□□□□ -0.79
NEK3-209ENST00000618856 RHBDL3P58872 404 aa10.1□□□□□ -0.79
NEK3-209ENST00000618856 POTEHQ6S545 545 aa10.1□□□□□ -0.79
NEK3-209ENST00000618856 SLF2Q8IX21 1173 aa10.1□□□□□ -0.79
NEK3-209ENST00000618856 PIH1D3Q9NQM4 214 aaKnown RBP10.1□□□□□ -0.79
NEK3-209ENST00000618856 ABCF2Q9UG63 623 aa10.1□□□□□ -0.79
NEK3-209ENST00000618856 MYH2Q9UKX2 1941 aa10.09□□□□□ -0.79
NEK3-209ENST00000618856 WDHD1O75717 1129 aaPredicted RBP10.09□□□□□ -0.79
NEK3-209ENST00000618856 MAP2K2P36507 400 aa10.09□□□□□ -0.79
NEK3-209ENST00000618856 ECE1P42892 770 aa10.09□□□□□ -0.79
NEK3-209ENST00000618856 PPP4CP60510 307 aa10.09□□□□□ -0.79
NEK3-209ENST00000618856 GSTO1P78417 241 aa10.09□□□□□ -0.79
NEK3-209ENST00000618856 SUPT20HL1Q3ZLR7 823 aa10.09□□□□□ -0.79
NEK3-209ENST00000618856 NBPF12Q5TAG4 269 aaPredicted RBP10.09□□□□□ -0.79
NEK3-209ENST00000618856 CYP4F22Q6NT55 531 aa10.09□□□□□ -0.79
NEK3-209ENST00000618856 RGMBQ6NW40 437 aa10.09□□□□□ -0.79
NEK3-209ENST00000618856 DZIP1Q86YF9 867 aaKnown RBP10.09□□□□□ -0.79
NEK3-209ENST00000618856 CDAN1Q8IWY9 1227 aa10.09□□□□□ -0.79
NEK3-209ENST00000618856 FAM151AQ8WW52 585 aa10.09□□□□□ -0.79
NEK3-209ENST00000618856 CAPNS2Q96L46 248 aa10.09□□□□□ -0.79
NEK3-209ENST00000618856 ZNF408Q9H9D4 720 aa10.09□□□□□ -0.79
NEK3-209ENST00000618856 VEZTQ9HBM0 779 aa10.09□□□□□ -0.79
NEK3-209ENST00000618856 SNRKQ9NRH2 765 aa10.09□□□□□ -0.79
NEK3-209ENST00000618856 FAM198AQ9UFP1 575 aa10.09□□□□□ -0.79
NEK3-209ENST00000618856 ATRNL1Q5VV63 1379 aa10.09□□□□□ -0.79
NEK3-209ENST00000618856 LAMB1P07942 1786 aa10.09□□□□□ -0.79
NEK3-209ENST00000618856 SALL3Q9BXA9 1300 aa10.08□□□□□ -0.8
NEK3-209ENST00000618856 TCP10L2B9ZVM9 353 aa10.08□□□□□ -0.8
NEK3-209ENST00000618856 APBB1O00213 710 aa10.08□□□□□ -0.8
NEK3-209ENST00000618856 SMARCA5O60264 1052 aaPredicted RBP10.08□□□□□ -0.8
NEK3-209ENST00000618856 USP2O75604 605 aaPredicted RBP10.08□□□□□ -0.8
NEK3-209ENST00000618856 CAPN15O75808 1086 aa10.08□□□□□ -0.8
NEK3-209ENST00000618856 LDHCP07864 332 aa10.08□□□□□ -0.8
NEK3-209ENST00000618856 SLC10A3P09131 477 aa10.08□□□□□ -0.8
NEK3-209ENST00000618856 IFIT2P09913 472 aaKnown RBP10.08□□□□□ -0.8
NEK3-209ENST00000618856 TNNI2P48788 182 aa10.08□□□□□ -0.8
NEK3-209ENST00000618856 CACNB3P54284 484 aa10.08□□□□□ -0.8
NEK3-209ENST00000618856 MAP3K10Q02779 954 aa10.08□□□□□ -0.8
NEK3-209ENST00000618856 NFIAQ12857 509 aa10.08□□□□□ -0.8
NEK3-209ENST00000618856 MOB2Q70IA6 237 aa10.08□□□□□ -0.8
NEK3-209ENST00000618856 ADGRA1Q86SQ6 560 aa10.08□□□□□ -0.8
NEK3-209ENST00000618856 EXOC6Q8TAG9 804 aa10.08□□□□□ -0.8
NEK3-209ENST00000618856 CCDC102AQ96A19 550 aa10.08□□□□□ -0.8
NEK3-209ENST00000618856 GCC1Q96CN9 775 aa10.08□□□□□ -0.8
NEK3-209ENST00000618856 HAUS7Q99871 368 aa10.08□□□□□ -0.8
NEK3-209ENST00000618856 TMEM39BQ9GZU3 492 aa10.08□□□□□ -0.8
NEK3-209ENST00000618856 ANTXR1Q9H6X2 564 aa10.08□□□□□ -0.8
NEK3-209ENST00000618856 USP40Q9NVE5 1235 aa10.08□□□□□ -0.8
NEK3-209ENST00000618856 COL2A1P02458 1487 aaPredicted RBP10.08□□□□□ -0.8
NEK3-209ENST00000618856 MYO5AQ9Y4I1 1855 aaKnown RBP10.08□□□□□ -0.8
NEK3-209ENST00000618856 UBE2Q2LH0YL09 131 aa10.07□□□□□ -0.8
NEK3-209ENST00000618856 ENTPD3O75355 529 aa10.07□□□□□ -0.8
NEK3-209ENST00000618856 NF2P35240 595 aa10.07□□□□□ -0.8
NEK3-209ENST00000618856 BTDP43251 543 aa10.07□□□□□ -0.8
NEK3-209ENST00000618856 RASAL3Q86YV0 1011 aa10.07□□□□□ -0.8
NEK3-209ENST00000618856 ZFPM1Q8IX07 1006 aa10.07□□□□□ -0.8
NEK3-209ENST00000618856 SMC5Q8IY18 1101 aa10.07□□□□□ -0.8
NEK3-209ENST00000618856 WBP1LQ9NX94 342 aa10.07□□□□□ -0.8
NEK3-209ENST00000618856 RAI14Q9P0K7 980 aa10.07□□□□□ -0.8
NEK3-209ENST00000618856 LRP2BPQ9P2M1 347 aa10.07□□□□□ -0.8
NEK3-209ENST00000618856 TCRBV5S4A2TA0A5A2 114 aa10.06□□□□□ -0.8
NEK3-209ENST00000618856 PPP1R12BO60237 982 aaPredicted RBP10.06□□□□□ -0.8
NEK3-209ENST00000618856 NOGQ13253 232 aa10.06□□□□□ -0.8
NEK3-209ENST00000618856 TTF1Q15361 905 aaPredicted RBP10.06□□□□□ -0.8
NEK3-209ENST00000618856 NAA16Q6N069 864 aaPredicted RBP10.06□□□□□ -0.8
NEK3-209ENST00000618856 SH3BP5LQ7L8J4 393 aa10.06□□□□□ -0.8
NEK3-209ENST00000618856 ARMC9Q7Z3E5 817 aa10.06□□□□□ -0.8
NEK3-209ENST00000618856 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.06□□□□□ -0.8
NEK3-209ENST00000618856 DDX4Q9NQI0 724 aaKnown RBP10.06□□□□□ -0.8
NEK3-209ENST00000618856 ECHDC1Q9NTX5 307 aa10.06□□□□□ -0.8
NEK3-209ENST00000618856 TMOD2Q9NZR1 351 aa10.06□□□□□ -0.8
NEK3-209ENST00000618856 ZNF112Q9UJU3 913 aa10.06□□□□□ -0.8
NEK3-209ENST00000618856 NDUFB9Q9Y6M9 179 aa10.06□□□□□ -0.8
NEK3-209ENST00000618856 TTC41PQ6P2S7 1318 aa10.06□□□□□ -0.8
NEK3-209ENST00000618856 FOCADQ5VW36 1801 aa10.05□□□□□ -0.8
NEK3-209ENST00000618856 OTOFQ9HC10 1997 aa10.05□□□□□ -0.8
NEK3-209ENST00000618856 AOC2O75106 756 aa10.05□□□□□ -0.8
NEK3-209ENST00000618856 IGHDP01880 384 aa10.05□□□□□ -0.8
NEK3-209ENST00000618856 RGS3P49796 1198 aa10.05□□□□□ -0.8
NEK3-209ENST00000618856 ZNF157P51786 506 aaPredicted RBP10.05□□□□□ -0.8
NEK3-209ENST00000618856 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.05□□□□□ -0.8
NEK3-209ENST00000618856 CERS3Q8IU89 383 aa10.05□□□□□ -0.8
NEK3-209ENST00000618856 REM2Q8IYK8 340 aaPredicted RBP10.05□□□□□ -0.8
NEK3-209ENST00000618856 PI4K2BQ8TCG2 481 aa10.05□□□□□ -0.8
NEK3-209ENST00000618856 HOOK2Q96ED9 719 aa10.05□□□□□ -0.8
NEK3-209ENST00000618856 ZIC5Q96T25 663 aa10.05□□□□□ -0.8
NEK3-209ENST00000618856 RIOK1Q9BRS2 568 aaKnown RBP10.05□□□□□ -0.8
NEK3-209ENST00000618856 ANGEL1Q9UNK9 670 aaKnown RBP10.05□□□□□ -0.8
NEK3-209ENST00000618856 FZD1Q9UP38 647 aa10.05□□□□□ -0.8
NEK3-209ENST00000618856 TBC1D12O60347 775 aa10.04□□□□□ -0.8
NEK3-209ENST00000618856 BAG3O95817 575 aa10.04□□□□□ -0.8
NEK3-209ENST00000618856 MAP2K1Q02750 393 aaPredicted RBP10.04□□□□□ -0.8
NEK3-209ENST00000618856 MAP3K12Q12852 859 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms