RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 GOPCQ9HD26 462 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 RIPOR2Q9Y4F9 1068 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 ZNF174Q15697 407 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 MICU3Q86XE3 530 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 CHPF2Q9P2E5 772 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 C6orf163Q5TEZ5 329 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 CNNM4Q6P4Q7 775 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 LMBR1LQ6UX01 489 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 AFAP1L1Q8TED9 768 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 EFCC1Q9HA90 598 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 RNF40O75150 1001 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 KRT13P13646 458 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 KRBA2Q6ZNG9 492 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 FCHSD1Q86WN1 690 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 TDRD7Q8NHU6 1098 aaKnown RBP3.43□□□□□ -1.86
LPP-221ENST00000618621 HDAC9Q9UKV0 1011 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 DTNBO60941 627 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 HOXB7P09629 217 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 CROCCP2Q86T23 111 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 LRRC45Q96CN5 670 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 RSRC1Q96IZ7 334 aaKnown RBP3.43□□□□□ -1.86
LPP-221ENST00000618621 C6orf50Q9HD87 102 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 PUF60Q9UHX1 559 aaKnown RBP3.43□□□□□ -1.86
LPP-221ENST00000618621 PEX14O75381 377 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 DRC1Q96MC2 740 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 NUCKS1Q9H1E3 243 aaKnown RBP3.43□□□□□ -1.86
LPP-221ENST00000618621 MORC2Q9Y6X9 1032 aaPredicted RBP3.43□□□□□ -1.86
LPP-221ENST00000618621 TBCAO75347 108 aaKnown RBP3.43□□□□□ -1.86
LPP-221ENST00000618621 ATP2B3Q16720 1220 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 SV2BQ7L1I2 683 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 TCHPQ9BT92 498 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 KNL1Q8NG31 2342 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 TCOF1Q13428 1488 aaKnown RBP3.43□□□□□ -1.86
LPP-221ENST00000618621 TMCO5BA8MYB1 307 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 PPP4R3AQ6IN85 833 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 RUFY4Q6ZNE9 571 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 C10orf67Q8IYJ2 551 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 ARFGAP2Q8N6H7 521 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 NAPGQ99747 312 aaPredicted RBP3.43□□□□□ -1.86
LPP-221ENST00000618621 NRBP1Q9UHY1 535 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 SLC4A4Q9Y6R1 1079 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 TEX14Q8IWB6 1497 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 IBTKQ9P2D0 1353 aaPredicted RBP3.43□□□□□ -1.86
LPP-221ENST00000618621 TSPY2A6NKD2 308 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 USP37Q86T82 979 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 MICAL1Q8TDZ2 1067 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 TMEM87BQ96K49 555 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 CARD6Q9BX69 1037 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 GUCA1BQ9UMX6 200 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 RP1P56715 2156 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 RPS6KA1Q15418 735 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 ME3Q16798 604 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 NFATC2IPQ8NCF5 419 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 NEK11Q8NG66 645 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 RASSF4Q9H2L5 321 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 NUP153P49790 1475 aaKnown RBP3.43□□□□□ -1.86
LPP-221ENST00000618621 KRT2P35908 639 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 SETDB1Q15047 1291 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 GPR161Q8N6U8 529 aaKnown RBP3.43□□□□□ -1.86
LPP-221ENST00000618621 OR8K1Q8NGG5 319 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 SPAG5Q96R06 1193 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 VPS18Q9P253 973 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 UNCXA6NJT0 531 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 TNFAIP3P21580 790 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 ARHGAP25P42331 645 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 PPFIA1Q13136 1202 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 UBE3BQ7Z3V4 1068 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 SPATA24Q86W54 205 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 ZSCAN29Q8IWY8 852 aaPredicted RBP3.43□□□□□ -1.86
LPP-221ENST00000618621 CCDC144CPQ8IYA2 1237 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 MAGEB6Q8N7X4 407 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 GOLGA5Q8TBA6 731 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 SREK1Q8WXA9 508 aaKnown RBP3.43□□□□□ -1.86
LPP-221ENST00000618621 IFT74Q96LB3 600 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 TRIM7Q9C029 511 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 KRT86O43790 486 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 TFCP2Q12800 502 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 SEPT6Q14141 434 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 POSTNQ15063 836 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 LSG1Q9H089 658 aaKnown RBP3.43□□□□□ -1.86
LPP-221ENST00000618621 INPP5BP32019 993 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 POLA2Q14181 598 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 CCDC84Q86UT8 332 aaPredicted RBP3.43□□□□□ -1.86
LPP-221ENST00000618621 TRIM47Q96LD4 638 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 TTC14Q96N46 770 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 CPLX4Q7Z7G2 160 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 A1BGP04217 495 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 KARSQ15046 597 aaKnown RBP3.43□□□□□ -1.86
LPP-221ENST00000618621 CCDC51Q96ER9 411 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 RTEL1Q9NZ71 1219 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 RNMTO43148 476 aaKnown RBP3.43□□□□□ -1.86
LPP-221ENST00000618621 AFMP43652 599 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 FBF1Q8TES7 1133 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 ZKSCAN3Q9BRR0 538 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 METTL22Q9BUU2 404 aaPredicted RBP3.43□□□□□ -1.86
LPP-221ENST00000618621 LGR6Q9HBX8 967 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 BTG4Q9NY30 223 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 NKIRAS1Q9NYS0 192 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 SAMD15Q9P1V8 674 aa3.43□□□□□ -1.86
LPP-221ENST00000618621 MTUS1Q9ULD2 1270 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms