RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 NACAP1Q9BZK3 213 aa19.96■□□□□ 0.79
TRAPPC3-210ENST00000617904 ZNF532Q9HCE3 1301 aa19.95■□□□□ 0.78
TRAPPC3-210ENST00000617904 TRPM7Q96QT4 1865 aa19.95■□□□□ 0.78
TRAPPC3-210ENST00000617904 C6orf229H3BNL8 230 aa19.95■□□□□ 0.78
TRAPPC3-210ENST00000617904 SNAP23O00161 211 aa19.95■□□□□ 0.78
TRAPPC3-210ENST00000617904 GSTO1P78417 241 aa19.95■□□□□ 0.78
TRAPPC3-210ENST00000617904 BLOC1S2Q6QNY1 142 aa19.95■□□□□ 0.78
TRAPPC3-210ENST00000617904 MAGEB6Q8N7X4 407 aa19.95■□□□□ 0.78
TRAPPC3-210ENST00000617904 JAKMIP1Q96N16 626 aaKnown RBP19.95■□□□□ 0.78
TRAPPC3-210ENST00000617904 COL4A1P02462 1669 aa19.95■□□□□ 0.78
TRAPPC3-210ENST00000617904 RPAP1Q9BWH6 1393 aaPredicted RBP19.94■□□□□ 0.78
TRAPPC3-210ENST00000617904 GPAA1O43292 621 aa19.94■□□□□ 0.78
TRAPPC3-210ENST00000617904 HSPD1P10809 573 aaKnown RBP19.94■□□□□ 0.78
TRAPPC3-210ENST00000617904 CASTP20810 708 aaKnown RBP19.94■□□□□ 0.78
TRAPPC3-210ENST00000617904 GPSM2P81274 684 aa19.94■□□□□ 0.78
TRAPPC3-210ENST00000617904 TNIP1Q15025 636 aa19.94■□□□□ 0.78
TRAPPC3-210ENST00000617904 CCDC129Q6ZRS4 1044 aa19.94■□□□□ 0.78
TRAPPC3-210ENST00000617904 OSBP2Q969R2 916 aa19.94■□□□□ 0.78
TRAPPC3-210ENST00000617904 CHMP4CQ96CF2 233 aa19.94■□□□□ 0.78
TRAPPC3-210ENST00000617904 SEC62Q99442 399 aaKnown RBP19.94■□□□□ 0.78
TRAPPC3-210ENST00000617904 PGAP2Q9UHJ9 254 aa19.94■□□□□ 0.78
TRAPPC3-210ENST00000617904 PALD1Q9ULE6 856 aa19.94■□□□□ 0.78
TRAPPC3-210ENST00000617904 MYH7P12883 1935 aa19.93■□□□□ 0.78
TRAPPC3-210ENST00000617904 APPP05067 770 aa19.93■□□□□ 0.78
TRAPPC3-210ENST00000617904 HIRAP54198 1017 aaPredicted RBP19.93■□□□□ 0.78
TRAPPC3-210ENST00000617904 VPS53Q5VIR6 699 aa19.93■□□□□ 0.78
TRAPPC3-210ENST00000617904 CERS3Q8IU89 383 aa19.93■□□□□ 0.78
TRAPPC3-210ENST00000617904 SLF2Q8IX21 1173 aa19.93■□□□□ 0.78
TRAPPC3-210ENST00000617904 ZSCAN31Q96LW9 406 aaPredicted RBP19.93■□□□□ 0.78
TRAPPC3-210ENST00000617904 NOL10Q9BSC4 688 aaKnown RBP19.93■□□□□ 0.78
TRAPPC3-210ENST00000617904 CWC22Q9HCG8 908 aaKnown RBP19.93■□□□□ 0.78
TRAPPC3-210ENST00000617904 PDRG1Q9NUG6 133 aa19.93■□□□□ 0.78
TRAPPC3-210ENST00000617904 AKAP11Q9UKA4 1901 aa19.92■□□□□ 0.78
TRAPPC3-210ENST00000617904 M0R2C6 588 aa19.92■□□□□ 0.78
TRAPPC3-210ENST00000617904 CYP7A1P22680 504 aa19.92■□□□□ 0.78
TRAPPC3-210ENST00000617904 LBX1P52954 281 aa19.92■□□□□ 0.78
TRAPPC3-210ENST00000617904 NAA16Q6N069 864 aaPredicted RBP19.92■□□□□ 0.78
TRAPPC3-210ENST00000617904 RUFY3Q7L099 469 aa19.92■□□□□ 0.78
TRAPPC3-210ENST00000617904 TBC1D22AQ8WUA7 517 aa19.92■□□□□ 0.78
TRAPPC3-210ENST00000617904 CAPNS2Q96L46 248 aa19.92■□□□□ 0.78
TRAPPC3-210ENST00000617904 ZC3H12CQ9C0D7 883 aaKnown RBP19.92■□□□□ 0.78
TRAPPC3-210ENST00000617904 ZSWIM6Q9HCJ5 1215 aa19.92■□□□□ 0.78
TRAPPC3-210ENST00000617904 CHMP5Q9NZZ3 219 aa19.92■□□□□ 0.78
TRAPPC3-210ENST00000617904 CIZ1Q9ULV3 898 aaPredicted RBP19.92■□□□□ 0.78
TRAPPC3-210ENST00000617904 TLL2Q9Y6L7 1015 aa19.92■□□□□ 0.78
TRAPPC3-210ENST00000617904 SALL1Q9NSC2 1324 aa19.92■□□□□ 0.78
TRAPPC3-210ENST00000617904 THSD7BQ9C0I4 1608 aa19.91■□□□□ 0.78
TRAPPC3-210ENST00000617904 SHTN1A0MZ66 631 aa19.91■□□□□ 0.78
TRAPPC3-210ENST00000617904 ZNF213O14771 459 aa19.91■□□□□ 0.78
TRAPPC3-210ENST00000617904 LDHCP07864 332 aa19.91■□□□□ 0.78
TRAPPC3-210ENST00000617904 HSPA8P11142 646 aaKnown RBP19.91■□□□□ 0.78
TRAPPC3-210ENST00000617904 MAP2K1Q02750 393 aaPredicted RBP19.91■□□□□ 0.78
TRAPPC3-210ENST00000617904 CHAF1AQ13111 956 aaPredicted RBP19.91■□□□□ 0.78
TRAPPC3-210ENST00000617904 CYP4F22Q6NT55 531 aa19.91■□□□□ 0.78
TRAPPC3-210ENST00000617904 TRPM4Q8TD43 1214 aa19.91■□□□□ 0.78
TRAPPC3-210ENST00000617904 NEK1Q96PY6 1258 aa19.91■□□□□ 0.78
TRAPPC3-210ENST00000617904 GLIS2Q9BZE0 524 aaPredicted RBP19.91■□□□□ 0.78
TRAPPC3-210ENST00000617904 POLLQ9UGP5 575 aa19.91■□□□□ 0.78
TRAPPC3-210ENST00000617904 CNOT7Q9UIV1 285 aaKnown RBP19.91■□□□□ 0.78
TRAPPC3-210ENST00000617904 IQSEC3Q9UPP2 1182 aaPredicted RBP19.91■□□□□ 0.78
TRAPPC3-210ENST00000617904 FGD1P98174 961 aa19.9■□□□□ 0.78
TRAPPC3-210ENST00000617904 TRDNQ13061 729 aa19.9■□□□□ 0.78
TRAPPC3-210ENST00000617904 DZIP1Q86YF9 867 aaKnown RBP19.9■□□□□ 0.78
TRAPPC3-210ENST00000617904 TDRD7Q8NHU6 1098 aaKnown RBP19.9■□□□□ 0.78
TRAPPC3-210ENST00000617904 TBC1D16Q8TBP0 767 aa19.9■□□□□ 0.78
TRAPPC3-210ENST00000617904 ZC3H15Q8WU90 426 aaKnown RBP19.9■□□□□ 0.78
TRAPPC3-210ENST00000617904 COA1Q9GZY4 146 aa19.9■□□□□ 0.78
TRAPPC3-210ENST00000617904 PUS7LQ9H0K6 701 aaKnown RBP19.9■□□□□ 0.78
TRAPPC3-210ENST00000617904 LIMCH1Q9UPQ0 1083 aa19.9■□□□□ 0.78
TRAPPC3-210ENST00000617904 DOCK2Q92608 1830 aa19.89■□□□□ 0.77
TRAPPC3-210ENST00000617904 MAGEB6P1A0A0J9YX57 407 aa19.89■□□□□ 0.77
TRAPPC3-210ENST00000617904 LDHBP07195 334 aaKnown RBP19.89■□□□□ 0.77
TRAPPC3-210ENST00000617904 ECE1P42892 770 aa19.89■□□□□ 0.77
TRAPPC3-210ENST00000617904 RASEFQ8IZ41 740 aa19.89■□□□□ 0.77
TRAPPC3-210ENST00000617904 UPF3BQ9BZI7 483 aaKnown RBP19.89■□□□□ 0.77
TRAPPC3-210ENST00000617904 ALDH8A1Q9H2A2 487 aaPredicted RBP19.89■□□□□ 0.77
TRAPPC3-210ENST00000617904 SLKQ9H2G2 1235 aaPredicted RBP19.89■□□□□ 0.77
TRAPPC3-210ENST00000617904 SH2B1Q9NRF2 756 aaPredicted RBP19.89■□□□□ 0.77
TRAPPC3-210ENST00000617904 ZBTB12Q9Y330 459 aaPredicted RBP19.89■□□□□ 0.77
TRAPPC3-210ENST00000617904 ZMYM6O95789 1325 aa19.89■□□□□ 0.77
TRAPPC3-210ENST00000617904 TCRBV5S4A2TA0A5A2 114 aa19.88■□□□□ 0.77
TRAPPC3-210ENST00000617904 PATL2C9JE40 543 aaKnown RBP19.88■□□□□ 0.77
TRAPPC3-210ENST00000617904 PSMD14O00487 310 aa19.88■□□□□ 0.77
TRAPPC3-210ENST00000617904 RIMBP2O15034 1052 aa19.88■□□□□ 0.77
TRAPPC3-210ENST00000617904 CELF2O95319 508 aaKnown RBP19.88■□□□□ 0.77
TRAPPC3-210ENST00000617904 ALX1Q15699 326 aa19.88■□□□□ 0.77
TRAPPC3-210ENST00000617904 PAXIP1Q6ZW49 1069 aaPredicted RBP19.88■□□□□ 0.77
TRAPPC3-210ENST00000617904 RALYLQ86SE5 291 aaKnown RBP19.88■□□□□ 0.77
TRAPPC3-210ENST00000617904 DPF2Q92785 391 aa19.88■□□□□ 0.77
TRAPPC3-210ENST00000617904 GPR101Q96P66 508 aaPredicted RBP19.88■□□□□ 0.77
TRAPPC3-210ENST00000617904 NAPBQ9H115 298 aa19.88■□□□□ 0.77
TRAPPC3-210ENST00000617904 DBNDD1Q9H9R9 158 aa19.88■□□□□ 0.77
TRAPPC3-210ENST00000617904 H7C1D1 291 aa19.87■□□□□ 0.77
TRAPPC3-210ENST00000617904 MBD4O95243 580 aa19.87■□□□□ 0.77
TRAPPC3-210ENST00000617904 IL1R1P14778 569 aa19.87■□□□□ 0.77
TRAPPC3-210ENST00000617904 SAPCD2Q86UD0 394 aa19.87■□□□□ 0.77
TRAPPC3-210ENST00000617904 MICALL2Q8IY33 904 aa19.87■□□□□ 0.77
TRAPPC3-210ENST00000617904 CD209Q9NNX6 404 aa19.87■□□□□ 0.77
TRAPPC3-210ENST00000617904 MYH13Q9UKX3 1938 aa19.87■□□□□ 0.77
TRAPPC3-210ENST00000617904 BAG3O95817 575 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms