RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 HDLBPQ00341 1268 aaKnown RBP9.67□□□□□ -0.86
TARDBP-219ENST00000617757 TNIP1Q15025 636 aa9.67□□□□□ -0.86
TARDBP-219ENST00000617757 VPS53Q5VIR6 699 aa9.67□□□□□ -0.86
TARDBP-219ENST00000617757 SAMD1Q6SPF0 538 aaPredicted RBP9.67□□□□□ -0.86
TARDBP-219ENST00000617757 HHIPL2Q6UWX4 724 aa9.67□□□□□ -0.86
TARDBP-219ENST00000617757 AGBL3Q8NEM8 1001 aa9.67□□□□□ -0.86
TARDBP-219ENST00000617757 MRIQ9BWK5 157 aa9.67□□□□□ -0.86
TARDBP-219ENST00000617757 AATFQ9NY61 560 aaKnown RBP eCLIP9.67□□□□□ -0.86
TARDBP-219ENST00000617757 MYH8P13535 1937 aa9.66□□□□□ -0.86
TARDBP-219ENST00000617757 ZNF541Q9H0D2 1346 aa9.66□□□□□ -0.86
TARDBP-219ENST00000617757 UTRNP46939 3433 aa9.66□□□□□ -0.86
TARDBP-219ENST00000617757 PATL2C9JE40 543 aaKnown RBP9.66□□□□□ -0.86
TARDBP-219ENST00000617757 FOXP2O15409 715 aa9.66□□□□□ -0.86
TARDBP-219ENST00000617757 BAG3O95817 575 aa9.66□□□□□ -0.86
TARDBP-219ENST00000617757 RBM25P49756 843 aaKnown RBP9.66□□□□□ -0.86
TARDBP-219ENST00000617757 SCNN1DP51172 638 aa9.66□□□□□ -0.86
TARDBP-219ENST00000617757 TEKT1Q969V4 418 aa9.66□□□□□ -0.86
TARDBP-219ENST00000617757 TBC1D32Q96NH3 1257 aa9.66□□□□□ -0.86
TARDBP-219ENST00000617757 NOL10Q9BSC4 688 aaKnown RBP9.66□□□□□ -0.86
TARDBP-219ENST00000617757 DSCC1Q9BVC3 393 aa9.66□□□□□ -0.86
TARDBP-219ENST00000617757 RNF181Q9P0P0 153 aa9.66□□□□□ -0.86
TARDBP-219ENST00000617757 ZBTB12Q9Y330 459 aaPredicted RBP9.66□□□□□ -0.86
TARDBP-219ENST00000617757 DAGLAQ9Y4D2 1042 aa9.66□□□□□ -0.86
TARDBP-219ENST00000617757 RPAP1Q9BWH6 1393 aaPredicted RBP9.65□□□□□ -0.86
TARDBP-219ENST00000617757 GSG1L2A8MUP6 293 aa9.65□□□□□ -0.86
TARDBP-219ENST00000617757 PRKAB2O43741 272 aa9.65□□□□□ -0.86
TARDBP-219ENST00000617757 GNAT2P19087 354 aa9.65□□□□□ -0.86
TARDBP-219ENST00000617757 HSPA4P34932 840 aa9.65□□□□□ -0.86
TARDBP-219ENST00000617757 BTDP43251 543 aa9.65□□□□□ -0.86
TARDBP-219ENST00000617757 CRKP46108 304 aa9.65□□□□□ -0.86
TARDBP-219ENST00000617757 NECTIN1Q15223 517 aa9.65□□□□□ -0.86
TARDBP-219ENST00000617757 C9orf131Q5VYM1 1079 aa9.65□□□□□ -0.86
TARDBP-219ENST00000617757 CERS3Q8IU89 383 aa9.65□□□□□ -0.86
TARDBP-219ENST00000617757 IFNL3Q8IZI9 196 aa9.65□□□□□ -0.86
TARDBP-219ENST00000617757 SH3RF3Q8TEJ3 882 aaPredicted RBP9.65□□□□□ -0.86
TARDBP-219ENST00000617757 SERPINA10Q9UK55 444 aa9.65□□□□□ -0.86
TARDBP-219ENST00000617757 RBM8AQ9Y5S9 174 aaKnown RBP9.65□□□□□ -0.86
TARDBP-219ENST00000617757 SLC4A4Q9Y6R1 1079 aa9.65□□□□□ -0.86
TARDBP-219ENST00000617757 ZMYM6O95789 1325 aa9.64□□□□□ -0.87
TARDBP-219ENST00000617757 SCN4AP35499 1836 aa9.64□□□□□ -0.87
TARDBP-219ENST00000617757 FGAP02671 866 aa9.64□□□□□ -0.87
TARDBP-219ENST00000617757 APPP05067 770 aa9.64□□□□□ -0.87
TARDBP-219ENST00000617757 USP17L8P0C7I0 530 aa9.64□□□□□ -0.87
TARDBP-219ENST00000617757 MCCP23508 829 aa9.64□□□□□ -0.87
TARDBP-219ENST00000617757 RPS12P25398 132 aaKnown RBP9.64□□□□□ -0.87
TARDBP-219ENST00000617757 MMP14P50281 582 aa9.64□□□□□ -0.87
TARDBP-219ENST00000617757 RBM5P52756 815 aaKnown RBP eCLIP9.64□□□□□ -0.87
TARDBP-219ENST00000617757 RHBDL3P58872 404 aa9.64□□□□□ -0.87
TARDBP-219ENST00000617757 ALX1Q15699 326 aa9.64□□□□□ -0.87
TARDBP-219ENST00000617757 CFAP100Q494V2 611 aa9.64□□□□□ -0.87
TARDBP-219ENST00000617757 APOBEC3HQ6NTF7 200 aaKnown RBP9.64□□□□□ -0.87
TARDBP-219ENST00000617757 SDR42E1Q8WUS8 393 aa9.64□□□□□ -0.87
TARDBP-219ENST00000617757 KCNB2Q92953 911 aa9.64□□□□□ -0.87
TARDBP-219ENST00000617757 ZDHHC15Q96MV8 337 aa9.64□□□□□ -0.87
TARDBP-219ENST00000617757 CRNKL1Q9BZJ0 848 aaKnown RBP9.64□□□□□ -0.87
TARDBP-219ENST00000617757 EPB41L4AQ9HCS5 686 aaPredicted RBP9.64□□□□□ -0.87
TARDBP-219ENST00000617757 HDAC9Q9UKV0 1011 aa9.64□□□□□ -0.87
TARDBP-219ENST00000617757 PALD1Q9ULE6 856 aa9.64□□□□□ -0.87
TARDBP-219ENST00000617757 PCDHAC2Q9Y5I4 1007 aa9.64□□□□□ -0.87
TARDBP-219ENST00000617757 GJA3Q9Y6H8 435 aa9.64□□□□□ -0.87
TARDBP-219ENST00000617757 SIPA1L1O43166 1804 aa9.63□□□□□ -0.87
TARDBP-219ENST00000617757 ABCB7O75027 752 aa9.63□□□□□ -0.87
TARDBP-219ENST00000617757 PLCG2P16885 1265 aa9.63□□□□□ -0.87
TARDBP-219ENST00000617757 GMPSP49915 693 aaPredicted RBP9.63□□□□□ -0.87
TARDBP-219ENST00000617757 CREB3L3Q68CJ9 461 aa9.63□□□□□ -0.87
TARDBP-219ENST00000617757 GIMAP6Q6P9H5 292 aa9.63□□□□□ -0.87
TARDBP-219ENST00000617757 TEX11Q8IYF3 940 aa9.63□□□□□ -0.87
TARDBP-219ENST00000617757 RASEFQ8IZ41 740 aa9.63□□□□□ -0.87
TARDBP-219ENST00000617757 GPC2Q8N158 579 aa9.63□□□□□ -0.87
TARDBP-219ENST00000617757 OGFOD1Q8N543 542 aa9.63□□□□□ -0.87
TARDBP-219ENST00000617757 MTMR14Q8NCE2 650 aa9.63□□□□□ -0.87
TARDBP-219ENST00000617757 DPF2Q92785 391 aa9.63□□□□□ -0.87
TARDBP-219ENST00000617757 PRMT6Q96LA8 375 aaPredicted RBP9.63□□□□□ -0.87
TARDBP-219ENST00000617757 NACAP1Q9BZK3 213 aa9.63□□□□□ -0.87
TARDBP-219ENST00000617757 ATP8A2Q9NTI2 1148 aa9.63□□□□□ -0.87
TARDBP-219ENST00000617757 USP40Q9NVE5 1235 aa9.63□□□□□ -0.87
TARDBP-219ENST00000617757 CTNNA3Q9UI47 895 aa9.63□□□□□ -0.87
TARDBP-219ENST00000617757 POLR2AP24928 1970 aaKnown RBP9.63□□□□□ -0.87
TARDBP-219ENST00000617757 SHTN1A0MZ66 631 aa9.62□□□□□ -0.87
TARDBP-219ENST00000617757 SLC27A2O14975 620 aa9.62□□□□□ -0.87
TARDBP-219ENST00000617757 MYCNP04198 464 aaPredicted RBP9.62□□□□□ -0.87
TARDBP-219ENST00000617757 CYP21A2P08686 494 aa9.62□□□□□ -0.87
TARDBP-219ENST00000617757 USP5P45974 858 aa9.62□□□□□ -0.87
TARDBP-219ENST00000617757 TDO2P48775 406 aa9.62□□□□□ -0.87
TARDBP-219ENST00000617757 ZNF280AP59817 542 aaPredicted RBP9.62□□□□□ -0.87
TARDBP-219ENST00000617757 ANAPC15P60006 121 aa9.62□□□□□ -0.87
TARDBP-219ENST00000617757 DLGAP5Q15398 846 aa9.62□□□□□ -0.87
TARDBP-219ENST00000617757 RNF20Q5VTR2 975 aa9.62□□□□□ -0.87
TARDBP-219ENST00000617757 CDC42EP5Q6NZY7 148 aa9.62□□□□□ -0.87
TARDBP-219ENST00000617757 TGFBRAP1Q8WUH2 860 aa9.62□□□□□ -0.87
TARDBP-219ENST00000617757 IL17RAQ96F46 866 aa9.62□□□□□ -0.87
TARDBP-219ENST00000617757 ZBED3Q96IU2 234 aaPredicted RBP9.62□□□□□ -0.87
TARDBP-219ENST00000617757 KIF2CQ99661 725 aa9.62□□□□□ -0.87
TARDBP-219ENST00000617757 NAPBQ9H115 298 aa9.62□□□□□ -0.87
TARDBP-219ENST00000617757 MYOZ2Q9NPC6 264 aa9.62□□□□□ -0.87
TARDBP-219ENST00000617757 DCP1AQ9NPI6 582 aaPredicted RBP9.62□□□□□ -0.87
TARDBP-219ENST00000617757 MKRN1Q9UHC7 482 aaKnown RBP9.62□□□□□ -0.87
TARDBP-219ENST00000617757 CNOT7Q9UIV1 285 aaKnown RBP9.62□□□□□ -0.87
TARDBP-219ENST00000617757 RBM19Q9Y4C8 960 aaKnown RBP9.62□□□□□ -0.87
TARDBP-219ENST00000617757 SNX14Q9Y5W7 946 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms