RNA–Protein interactions for RNA: ENST00000616995.4

PRKD1-209, Transcript of protein kinase D1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKD1, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-209ENST00000616995 SKILP12757 684 aa16.78■□□□□ 0.28
PRKD1-209ENST00000616995 RTN1Q16799 776 aa16.78■□□□□ 0.28
PRKD1-209ENST00000616995 MB21D2Q8IYB1 491 aaPredicted RBP16.78■□□□□ 0.28
PRKD1-209ENST00000616995 GNL3LQ9NVN8 582 aaKnown RBP16.78■□□□□ 0.28
PRKD1-209ENST00000616995 DYNLL1P63167 89 aaKnown RBP16.78■□□□□ 0.28
PRKD1-209ENST00000616995 CAVIN4Q5BKX8 364 aa16.78■□□□□ 0.28
PRKD1-209ENST00000616995 KCNG4Q8TDN1 519 aa16.78■□□□□ 0.28
PRKD1-209ENST00000616995 MARF1Q9Y4F3 1742 aaKnown RBP16.78■□□□□ 0.28
PRKD1-209ENST00000616995 PALLDQ8WX93 1383 aa16.78■□□□□ 0.28
PRKD1-209ENST00000616995 KDM3BQ7LBC6 1761 aa16.78■□□□□ 0.28
PRKD1-209ENST00000616995 NKX1-1Q15270 411 aaPredicted RBP16.78■□□□□ 0.28
PRKD1-209ENST00000616995 CACTINQ8WUQ7 758 aaKnown RBP16.78■□□□□ 0.28
PRKD1-209ENST00000616995 ZBTB9Q96C00 473 aa16.78■□□□□ 0.28
PRKD1-209ENST00000616995 SPDYE4A6NLX3 237 aa16.77■□□□□ 0.28
PRKD1-209ENST00000616995 NRDCO43847 1150 aa16.77■□□□□ 0.28
PRKD1-209ENST00000616995 CSF1RP07333 972 aa16.77■□□□□ 0.28
PRKD1-209ENST00000616995 PNOCQ13519 176 aa16.77■□□□□ 0.28
PRKD1-209ENST00000616995 CCDC144BQ3MJ40 725 aa16.77■□□□□ 0.28
PRKD1-209ENST00000616995 CTAGE5O15320 804 aa16.77■□□□□ 0.27
PRKD1-209ENST00000616995 LINC00301Q8NCQ3 95 aa16.77■□□□□ 0.27
PRKD1-209ENST00000616995 STRBPQ96SI9 672 aaKnown RBP16.77■□□□□ 0.27
PRKD1-209ENST00000616995 CPDO75976 1380 aa16.77■□□□□ 0.27
PRKD1-209ENST00000616995 COL5A2P05997 1499 aaPredicted RBP16.76■□□□□ 0.27
PRKD1-209ENST00000616995 PFKFB1P16118 471 aa16.76■□□□□ 0.27
PRKD1-209ENST00000616995 AFMP43652 599 aa16.76■□□□□ 0.27
PRKD1-209ENST00000616995 ZNF827Q17R98 1081 aa16.76■□□□□ 0.27
PRKD1-209ENST00000616995 OLFM4Q6UX06 510 aa16.76■□□□□ 0.27
PRKD1-209ENST00000616995 JMYQ8N9B5 988 aa16.76■□□□□ 0.27
PRKD1-209ENST00000616995 STAMQ92783 540 aa16.76■□□□□ 0.27
PRKD1-209ENST00000616995 RIOK3O14730 519 aaKnown RBP16.76■□□□□ 0.27
PRKD1-209ENST00000616995 GOLGA8FQ08AF8 430 aa16.76■□□□□ 0.27
PRKD1-209ENST00000616995 GOLGA8DPQ0D2H9 430 aa16.76■□□□□ 0.27
PRKD1-209ENST00000616995 NR5A1Q13285 461 aa16.76■□□□□ 0.27
PRKD1-209ENST00000616995 CABP5Q9NP86 173 aa16.76■□□□□ 0.27
PRKD1-209ENST00000616995 ANKIB1Q9P2G1 1089 aa16.76■□□□□ 0.27
PRKD1-209ENST00000616995 TPM3P06753 285 aa16.76■□□□□ 0.27
PRKD1-209ENST00000616995 IL6STP40189 918 aaPredicted RBP16.76■□□□□ 0.27
PRKD1-209ENST00000616995 ERFEQ4G0M1 354 aa16.76■□□□□ 0.27
PRKD1-209ENST00000616995 NBPF5PQ86XG9 351 aaPredicted RBP16.76■□□□□ 0.27
PRKD1-209ENST00000616995 CDC5LQ99459 802 aaKnown RBP16.76■□□□□ 0.27
PRKD1-209ENST00000616995 GUCY1A2P33402 732 aa16.75■□□□□ 0.27
PRKD1-209ENST00000616995 FAM47AQ5JRC9 791 aa16.75■□□□□ 0.27
PRKD1-209ENST00000616995 DIS3L2Q8IYB7 885 aaKnown RBP16.75■□□□□ 0.27
PRKD1-209ENST00000616995 AATFQ9NY61 560 aaKnown RBP eCLIP16.75■□□□□ 0.27
PRKD1-209ENST00000616995 SRP68Q9UHB9 627 aaKnown RBP16.75■□□□□ 0.27
PRKD1-209ENST00000616995 HPS5Q9UPZ3 1129 aa16.75■□□□□ 0.27
PRKD1-209ENST00000616995 LMO7Q8WWI1 1683 aa16.75■□□□□ 0.27
PRKD1-209ENST00000616995 MAGEB6P1A0A0J9YX57 407 aa16.75■□□□□ 0.27
PRKD1-209ENST00000616995 PATL2C9JE40 543 aaKnown RBP16.75■□□□□ 0.27
PRKD1-209ENST00000616995 CBX1P83916 185 aa16.75■□□□□ 0.27
PRKD1-209ENST00000616995 KIF23Q02241 960 aaPredicted RBP16.75■□□□□ 0.27
PRKD1-209ENST00000616995 VPS54Q9P1Q0 977 aa16.75■□□□□ 0.27
PRKD1-209ENST00000616995 TRIM28Q13263 835 aaKnown RBP16.75■□□□□ 0.27
PRKD1-209ENST00000616995 AKNAD1Q5T1N1 836 aa16.75■□□□□ 0.27
PRKD1-209ENST00000616995 ADALQ6DHV7 355 aa16.75■□□□□ 0.27
PRKD1-209ENST00000616995 ZNF652Q9Y2D9 606 aa16.75■□□□□ 0.27
PRKD1-209ENST00000616995 LMTK3Q96Q04 1460 aa16.74■□□□□ 0.27
PRKD1-209ENST00000616995 TULP1O00294 542 aaPredicted RBP16.74■□□□□ 0.27
PRKD1-209ENST00000616995 ZPR1O75312 459 aa16.74■□□□□ 0.27
PRKD1-209ENST00000616995 ITPK1Q13572 414 aa16.74■□□□□ 0.27
PRKD1-209ENST00000616995 ILDR1Q86SU0 546 aaPredicted RBP16.74■□□□□ 0.27
PRKD1-209ENST00000616995 GRAMD1CQ8IYS0 662 aa16.74■□□□□ 0.27
PRKD1-209ENST00000616995 ALDH8A1Q9H2A2 487 aaPredicted RBP16.74■□□□□ 0.27
PRKD1-209ENST00000616995 FOXP2O15409 715 aa16.74■□□□□ 0.27
PRKD1-209ENST00000616995 COBLO75128 1261 aa16.74■□□□□ 0.27
PRKD1-209ENST00000616995 KIAA1524Q8TCG1 905 aa16.74■□□□□ 0.27
PRKD1-209ENST00000616995 CCAR2Q8N163 923 aaKnown RBP16.73■□□□□ 0.27
PRKD1-209ENST00000616995 CCDC112Q8NEF3 446 aa16.73■□□□□ 0.27
PRKD1-209ENST00000616995 GNPATO15228 680 aa16.73■□□□□ 0.27
PRKD1-209ENST00000616995 STX17P56962 302 aa16.73■□□□□ 0.27
PRKD1-209ENST00000616995 UBE3CQ15386 1083 aa16.73■□□□□ 0.27
PRKD1-209ENST00000616995 CPLX3Q8WVH0 158 aa16.73■□□□□ 0.27
PRKD1-209ENST00000616995 KIAA1468Q9P260 1216 aa16.73■□□□□ 0.27
PRKD1-209ENST00000616995 V9GY48 417 aaPredicted RBP16.73■□□□□ 0.27
PRKD1-209ENST00000616995 MROH5Q6ZUA9 1318 aa16.73■□□□□ 0.27
PRKD1-209ENST00000616995 SH2B2O14492 632 aaPredicted RBP16.73■□□□□ 0.27
PRKD1-209ENST00000616995 GPR101Q96P66 508 aaPredicted RBP16.73■□□□□ 0.27
PRKD1-209ENST00000616995 WDHD1O75717 1129 aaPredicted RBP16.72■□□□□ 0.27
PRKD1-209ENST00000616995 NAA30Q147X3 362 aaPredicted RBP16.72■□□□□ 0.27
PRKD1-209ENST00000616995 TRMT44Q8IYL2 757 aaKnown RBP16.72■□□□□ 0.27
PRKD1-209ENST00000616995 XPO4Q9C0E2 1151 aaKnown RBP16.72■□□□□ 0.27
PRKD1-209ENST00000616995 EPB41L4AQ9HCS5 686 aaPredicted RBP16.72■□□□□ 0.27
PRKD1-209ENST00000616995 PTPN14Q15678 1187 aa16.72■□□□□ 0.27
PRKD1-209ENST00000616995 IFIT1BQ5T764 474 aaKnown RBP16.72■□□□□ 0.27
PRKD1-209ENST00000616995 RTEL1Q9NZ71 1219 aa16.72■□□□□ 0.27
PRKD1-209ENST00000616995 POLR2DO15514 142 aaKnown RBP16.72■□□□□ 0.27
PRKD1-209ENST00000616995 SNW1Q13573 536 aaKnown RBP16.72■□□□□ 0.27
PRKD1-209ENST00000616995 BRAPQ7Z569 592 aa16.72■□□□□ 0.27
PRKD1-209ENST00000616995 MARCH10Q8NA82 808 aaPredicted RBP16.72■□□□□ 0.27
PRKD1-209ENST00000616995 KRT23Q9C075 422 aa16.72■□□□□ 0.27
PRKD1-209ENST00000616995 USP17L12C9JPN9 530 aa16.71■□□□□ 0.27
PRKD1-209ENST00000616995 USP17L21D6R901 530 aa16.71■□□□□ 0.27
PRKD1-209ENST00000616995 ATP1A3P13637 1013 aa16.71■□□□□ 0.27
PRKD1-209ENST00000616995 SFPQP23246 707 aaKnown RBP eCLIP16.71■□□□□ 0.27
PRKD1-209ENST00000616995 DHX58Q96C10 678 aa16.71■□□□□ 0.27
PRKD1-209ENST00000616995 ZMYM6O95789 1325 aa16.71■□□□□ 0.27
PRKD1-209ENST00000616995 FOXN1O15353 648 aa16.71■□□□□ 0.27
PRKD1-209ENST00000616995 DZIP1Q86YF9 867 aaKnown RBP16.71■□□□□ 0.27
PRKD1-209ENST00000616995 CELF1Q92879 486 aaKnown RBP16.71■□□□□ 0.27
PRKD1-209ENST00000616995 SETDB2Q96T68 719 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms