RNA–Protein interactions for RNA: ENST00000616527.4

MALAT1-208, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-208ENST00000616527 MTMR14Q8NCE2 650 aa9.5□□□□□ -0.89
MALAT1-208ENST00000616527 KIFC2Q96AC6 838 aa9.5□□□□□ -0.89
MALAT1-208ENST00000616527 TRIM47Q96LD4 638 aa9.5□□□□□ -0.89
MALAT1-208ENST00000616527 CWC22Q9HCG8 908 aaKnown RBP9.5□□□□□ -0.89
MALAT1-208ENST00000616527 CCDC87Q9NVE4 849 aa9.5□□□□□ -0.89
MALAT1-208ENST00000616527 ZC3H4Q9UPT8 1303 aaKnown RBP9.5□□□□□ -0.89
MALAT1-208ENST00000616527 MAGEB6P1A0A0J9YX57 407 aa9.49□□□□□ -0.89
MALAT1-208ENST00000616527 USP17L8P0C7I0 530 aa9.49□□□□□ -0.89
MALAT1-208ENST00000616527 GRM5P41594 1212 aa9.49□□□□□ -0.89
MALAT1-208ENST00000616527 PARP10Q53GL7 1025 aa9.49□□□□□ -0.89
MALAT1-208ENST00000616527 CLEC4GQ6UXB4 293 aa9.49□□□□□ -0.89
MALAT1-208ENST00000616527 NGLY1Q96IV0 654 aa9.49□□□□□ -0.89
MALAT1-208ENST00000616527 LSG1Q9H089 658 aaKnown RBP9.49□□□□□ -0.89
MALAT1-208ENST00000616527 ZBTB1Q9Y2K1 713 aa9.49□□□□□ -0.89
MALAT1-208ENST00000616527 ABCC12Q96J65 1359 aa9.49□□□□□ -0.89
MALAT1-208ENST00000616527 RREB1Q92766 1687 aa9.48□□□□□ -0.89
MALAT1-208ENST00000616527 RAD21O60216 631 aa9.48□□□□□ -0.89
MALAT1-208ENST00000616527 TFCP2Q12800 502 aa9.48□□□□□ -0.89
MALAT1-208ENST00000616527 CCDC57Q2TAC2 916 aa9.48□□□□□ -0.89
MALAT1-208ENST00000616527 CLEC17AQ6ZS10 378 aa9.48□□□□□ -0.89
MALAT1-208ENST00000616527 KIAA1211Q6ZU35 1233 aa9.48□□□□□ -0.89
MALAT1-208ENST00000616527 DZIP3Q86Y13 1208 aaKnown RBP9.48□□□□□ -0.89
MALAT1-208ENST00000616527 HAUS7Q99871 368 aa9.48□□□□□ -0.89
MALAT1-208ENST00000616527 KLF16Q9BXK1 252 aaPredicted RBP9.48□□□□□ -0.89
MALAT1-208ENST00000616527 TM6SF1Q9BZW5 370 aa9.48□□□□□ -0.89
MALAT1-208ENST00000616527 ANO2Q9NQ90 1003 aa9.48□□□□□ -0.89
MALAT1-208ENST00000616527 DIAPH3Q9NSV4 1193 aa9.48□□□□□ -0.89
MALAT1-208ENST00000616527 DBNLQ9UJU6 430 aaKnown RBP9.48□□□□□ -0.89
MALAT1-208ENST00000616527 AKAP2Q9Y2D5 859 aa9.48□□□□□ -0.89
MALAT1-208ENST00000616527 MAP4K5Q9Y4K4 846 aa9.48□□□□□ -0.89
MALAT1-208ENST00000616527 PALLDQ8WX93 1383 aa9.48□□□□□ -0.89
MALAT1-208ENST00000616527 TJP1Q07157 1748 aa9.48□□□□□ -0.89
MALAT1-208ENST00000616527 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.48□□□□□ -0.89
MALAT1-208ENST00000616527 PDE8AO60658 829 aa9.47□□□□□ -0.89
MALAT1-208ENST00000616527 SNRPBP14678 240 aaKnown RBP9.47□□□□□ -0.89
MALAT1-208ENST00000616527 TIMP2P16035 220 aa9.47□□□□□ -0.89
MALAT1-208ENST00000616527 CRKLP46109 303 aaKnown RBP9.47□□□□□ -0.89
MALAT1-208ENST00000616527 WDR4P57081 412 aaKnown RBP9.47□□□□□ -0.89
MALAT1-208ENST00000616527 TRIM46Q7Z4K8 759 aa9.47□□□□□ -0.89
MALAT1-208ENST00000616527 SYTL4Q96C24 671 aaPredicted RBP9.47□□□□□ -0.89
MALAT1-208ENST00000616527 INTS4Q96HW7 963 aaKnown RBP9.47□□□□□ -0.89
MALAT1-208ENST00000616527 ZNF512BQ96KM6 892 aaPredicted RBP9.47□□□□□ -0.89
MALAT1-208ENST00000616527 CCDC8Q9H0W5 538 aaPredicted RBP9.47□□□□□ -0.89
MALAT1-208ENST00000616527 SIL1Q9H173 461 aa9.47□□□□□ -0.89
MALAT1-208ENST00000616527 CEP126Q9P2H0 1117 aa9.47□□□□□ -0.89
MALAT1-208ENST00000616527 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.47□□□□□ -0.89
MALAT1-208ENST00000616527 CNTNAP4Q9C0A0 1308 aa9.47□□□□□ -0.89
MALAT1-208ENST00000616527 RTL9Q8NET4 1388 aa9.47□□□□□ -0.89
MALAT1-208ENST00000616527 CAMTA2O94983 1202 aa9.46□□□□□ -0.9
MALAT1-208ENST00000616527 NR3C2P08235 984 aa9.46□□□□□ -0.9
MALAT1-208ENST00000616527 BMP1P13497 986 aa9.46□□□□□ -0.9
MALAT1-208ENST00000616527 PTMSP20962 102 aa9.46□□□□□ -0.9
MALAT1-208ENST00000616527 HMGB2P26583 209 aaKnown RBP9.46□□□□□ -0.9
MALAT1-208ENST00000616527 CTSWP56202 376 aa9.46□□□□□ -0.9
MALAT1-208ENST00000616527 IFIT5Q13325 482 aaKnown RBP9.46□□□□□ -0.9
MALAT1-208ENST00000616527 CUL4AQ13619 759 aa9.46□□□□□ -0.9
MALAT1-208ENST00000616527 HLFQ16534 295 aa9.46□□□□□ -0.9
MALAT1-208ENST00000616527 TSGA10IPQ3SY00 556 aa9.46□□□□□ -0.9
MALAT1-208ENST00000616527 ERFEQ4G0M1 354 aa9.46□□□□□ -0.9
MALAT1-208ENST00000616527 TTLL11Q8NHH1 800 aa9.46□□□□□ -0.9
MALAT1-208ENST00000616527 KLHDC4Q8TBB5 520 aa9.46□□□□□ -0.9
MALAT1-208ENST00000616527 ARHGAP9Q9BRR9 750 aa9.46□□□□□ -0.9
MALAT1-208ENST00000616527 HMX1Q9NP08 348 aaPredicted RBP9.46□□□□□ -0.9
MALAT1-208ENST00000616527 CCDC9Q9Y3X0 531 aaKnown RBP9.46□□□□□ -0.9
MALAT1-208ENST00000616527 AFDNP55196 1824 aaKnown RBP9.46□□□□□ -0.9
MALAT1-208ENST00000616527 DOT1LQ8TEK3 1739 aa9.45□□□□□ -0.9
MALAT1-208ENST00000616527 IRS4O14654 1257 aaPredicted RBP9.45□□□□□ -0.9
MALAT1-208ENST00000616527 ITPK1Q13572 414 aa9.45□□□□□ -0.9
MALAT1-208ENST00000616527 RAB3GAP1Q15042 981 aa9.45□□□□□ -0.9
MALAT1-208ENST00000616527 LRRFIP1Q32MZ4 808 aaKnown RBP9.45□□□□□ -0.9
MALAT1-208ENST00000616527 VASH1Q7L8A9 365 aaPredicted RBP9.45□□□□□ -0.9
MALAT1-208ENST00000616527 KBTBD3Q8NAB2 608 aa9.45□□□□□ -0.9
MALAT1-208ENST00000616527 PNMA1Q8ND90 353 aa9.45□□□□□ -0.9
MALAT1-208ENST00000616527 EPS8L1Q8TE68 723 aa9.45□□□□□ -0.9
MALAT1-208ENST00000616527 JARID2Q92833 1246 aaPredicted RBP9.45□□□□□ -0.9
MALAT1-208ENST00000616527 MAP4K1Q92918 833 aa9.45□□□□□ -0.9
MALAT1-208ENST00000616527 C8orf37Q96NL8 207 aa9.45□□□□□ -0.9
MALAT1-208ENST00000616527 ALDH8A1Q9H2A2 487 aaPredicted RBP9.45□□□□□ -0.9
MALAT1-208ENST00000616527 SLKQ9H2G2 1235 aaPredicted RBP9.45□□□□□ -0.9
MALAT1-208ENST00000616527 TLR7Q9NYK1 1049 aaKnown RBP9.45□□□□□ -0.9
MALAT1-208ENST00000616527 USP21Q9UK80 565 aa9.45□□□□□ -0.9
MALAT1-208ENST00000616527 ZNF652Q9Y2D9 606 aa9.45□□□□□ -0.9
MALAT1-208ENST00000616527 RIPOR2Q9Y4F9 1068 aa9.45□□□□□ -0.9
MALAT1-208ENST00000616527 GPSM3Q9Y4H4 160 aa9.45□□□□□ -0.9
MALAT1-208ENST00000616527 MED23Q9ULK4 1368 aa9.45□□□□□ -0.9
MALAT1-208ENST00000616527 ZNF609O15014 1411 aa9.45□□□□□ -0.9
MALAT1-208ENST00000616527 THSD7AQ9UPZ6 1657 aa9.45□□□□□ -0.9
MALAT1-208ENST00000616527 ANKRD18BA2A2Z9 1011 aa9.44□□□□□ -0.9
MALAT1-208ENST00000616527 NUCB2P80303 420 aa9.44□□□□□ -0.9
MALAT1-208ENST00000616527 PTK2Q05397 1052 aa9.44□□□□□ -0.9
MALAT1-208ENST00000616527 NECTIN1Q15223 517 aa9.44□□□□□ -0.9
MALAT1-208ENST00000616527 USPL1Q5W0Q7 1092 aa9.44□□□□□ -0.9
MALAT1-208ENST00000616527 CWC27Q6UX04 472 aaKnown RBP9.44□□□□□ -0.9
MALAT1-208ENST00000616527 CCDC82Q8N4S0 544 aa9.44□□□□□ -0.9
MALAT1-208ENST00000616527 FAM89AQ96GI7 184 aa9.44□□□□□ -0.9
MALAT1-208ENST00000616527 DBNDD2Q9BQY9 259 aa9.44□□□□□ -0.9
MALAT1-208ENST00000616527 BCL11AQ9H165 835 aa9.44□□□□□ -0.9
MALAT1-208ENST00000616527 IL25Q9H293 177 aa9.44□□□□□ -0.9
MALAT1-208ENST00000616527 BOLA2Q9H3K6 86 aa9.44□□□□□ -0.9
MALAT1-208ENST00000616527 GDPD2Q9HCC8 539 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms