RNA–Protein interactions for RNA: ENST00000616383.1

MMP28-206, Transcript of matrix metallopeptidase 28, humanhuman

TSL 3

Gene MMP28, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-206ENST00000616383 SLC9C2Q5TAH2 1124 aa13.21□□□□□ -0.29
MMP28-206ENST00000616383 ERICH6Q7L0X2 663 aa13.21□□□□□ -0.29
MMP28-206ENST00000616383 ZNF710Q8N1W2 664 aa13.21□□□□□ -0.29
MMP28-206ENST00000616383 ZGPATQ8N5A5 531 aaKnown RBP13.21□□□□□ -0.29
MMP28-206ENST00000616383 MAGEB6Q8N7X4 407 aa13.21□□□□□ -0.29
MMP28-206ENST00000616383 VPS33BQ9H267 617 aa13.21□□□□□ -0.29
MMP28-206ENST00000616383 LAMA4Q16363 1823 aa13.2□□□□□ -0.3
MMP28-206ENST00000616383 ECM29Q5VYK3 1845 aa13.2□□□□□ -0.3
MMP28-206ENST00000616383 MAST3O60307 1309 aa13.2□□□□□ -0.3
MMP28-206ENST00000616383 ZNF532Q9HCE3 1301 aa13.2□□□□□ -0.3
MMP28-206ENST00000616383 TCRBV5S4A2TA0A5A2 114 aa13.2□□□□□ -0.3
MMP28-206ENST00000616383 EIF5BO60841 1220 aaKnown RBP13.2□□□□□ -0.3
MMP28-206ENST00000616383 PRDX5P30044 214 aa13.2□□□□□ -0.3
MMP28-206ENST00000616383 UBE3CQ15386 1083 aa13.2□□□□□ -0.3
MMP28-206ENST00000616383 MFSD14BQ5SR56 506 aa13.2□□□□□ -0.3
MMP28-206ENST00000616383 SPTY2D1Q68D10 685 aaPredicted RBP13.2□□□□□ -0.3
MMP28-206ENST00000616383 NIM1KQ8IY84 436 aa13.2□□□□□ -0.3
MMP28-206ENST00000616383 TBC1D22AQ8WUA7 517 aa13.2□□□□□ -0.3
MMP28-206ENST00000616383 APPBP2Q92624 585 aa13.2□□□□□ -0.3
MMP28-206ENST00000616383 SEC62Q99442 399 aaKnown RBP13.2□□□□□ -0.3
MMP28-206ENST00000616383 KCNQ5Q9NR82 932 aa13.2□□□□□ -0.3
MMP28-206ENST00000616383 HELLSQ9NRZ9 838 aa13.2□□□□□ -0.3
MMP28-206ENST00000616383 FOCADQ5VW36 1801 aa13.19□□□□□ -0.3
MMP28-206ENST00000616383 YDJCA8MPS7 323 aa13.19□□□□□ -0.3
MMP28-206ENST00000616383 M0R2C6 588 aa13.19□□□□□ -0.3
MMP28-206ENST00000616383 REC8O95072 547 aa13.19□□□□□ -0.3
MMP28-206ENST00000616383 LDHBP07195 334 aaKnown RBP13.19□□□□□ -0.3
MMP28-206ENST00000616383 YBX3P16989 372 aaKnown RBP eCLIP13.19□□□□□ -0.3
MMP28-206ENST00000616383 MECOMQ03112 1051 aa13.19□□□□□ -0.3
MMP28-206ENST00000616383 GRIK5Q16478 980 aa13.19□□□□□ -0.3
MMP28-206ENST00000616383 TTLL5Q6EMB2 1281 aa13.19□□□□□ -0.3
MMP28-206ENST00000616383 CCDC129Q6ZRS4 1044 aa13.19□□□□□ -0.3
MMP28-206ENST00000616383 ZNF589Q86UQ0 364 aaPredicted RBP13.19□□□□□ -0.3
MMP28-206ENST00000616383 DZIP1Q86YF9 867 aaKnown RBP13.19□□□□□ -0.3
MMP28-206ENST00000616383 IFNLR1Q8IU57 520 aaPredicted RBP13.19□□□□□ -0.3
MMP28-206ENST00000616383 NAV1Q8NEY1 1877 aa13.19□□□□□ -0.3
MMP28-206ENST00000616383 CCDC171Q6TFL3 1326 aa13.18□□□□□ -0.3
MMP28-206ENST00000616383 USP17L3A6NCW0 530 aa13.18□□□□□ -0.3
MMP28-206ENST00000616383 USP17L4A6NCW7 530 aa13.18□□□□□ -0.3
MMP28-206ENST00000616383 CYP7A1P22680 504 aa13.18□□□□□ -0.3
MMP28-206ENST00000616383 PRELPP51888 382 aa13.18□□□□□ -0.3
MMP28-206ENST00000616383 MCMDC2Q4G0Z9 681 aa13.18□□□□□ -0.3
MMP28-206ENST00000616383 STRIP1Q5VSL9 837 aa13.18□□□□□ -0.3
MMP28-206ENST00000616383 NAA16Q6N069 864 aaPredicted RBP13.18□□□□□ -0.3
MMP28-206ENST00000616383 ARHGAP27Q6ZUM4 889 aa13.18□□□□□ -0.3
MMP28-206ENST00000616383 USP17L1Q7RTZ2 530 aa13.18□□□□□ -0.3
MMP28-206ENST00000616383 CERS5Q8N5B7 392 aa13.18□□□□□ -0.3
MMP28-206ENST00000616383 ZNF384Q8TF68 577 aa13.18□□□□□ -0.3
MMP28-206ENST00000616383 OSBP2Q969R2 916 aa13.18□□□□□ -0.3
MMP28-206ENST00000616383 NSUN4Q96CB9 384 aaKnown RBP13.18□□□□□ -0.3
MMP28-206ENST00000616383 MXD3Q9BW11 206 aa13.18□□□□□ -0.3
MMP28-206ENST00000616383 UPF2Q9HAU5 1272 aaKnown RBP13.18□□□□□ -0.3
MMP28-206ENST00000616383 ANO2Q9NQ90 1003 aa13.18□□□□□ -0.3
MMP28-206ENST00000616383 TSHZ2Q9NRE2 1034 aa13.18□□□□□ -0.3
MMP28-206ENST00000616383 BAZ2AQ9UIF9 1905 aaKnown RBP13.17□□□□□ -0.3
MMP28-206ENST00000616383 LAMB1P07942 1786 aa13.17□□□□□ -0.3
MMP28-206ENST00000616383 DACT2Q5SW24 774 aa13.17□□□□□ -0.3
MMP28-206ENST00000616383 ADGRA1Q86SQ6 560 aa13.17□□□□□ -0.3
MMP28-206ENST00000616383 JDP2Q8WYK2 163 aa13.17□□□□□ -0.3
MMP28-206ENST00000616383 PUS7LQ9H0K6 701 aaKnown RBP13.17□□□□□ -0.3
MMP28-206ENST00000616383 ZNRF3Q9ULT6 936 aa13.17□□□□□ -0.3
MMP28-206ENST00000616383 GOLGB1Q14789 3259 aaKnown RBP13.17□□□□□ -0.3
MMP28-206ENST00000616383 GPAA1O43292 621 aa13.16□□□□□ -0.3
MMP28-206ENST00000616383 IGSF3O75054 1194 aa13.16□□□□□ -0.3
MMP28-206ENST00000616383 MBD4O95243 580 aa13.16□□□□□ -0.3
MMP28-206ENST00000616383 FKBP1AP62942 108 aaKnown RBP13.16□□□□□ -0.3
MMP28-206ENST00000616383 GSTO1P78417 241 aa13.16□□□□□ -0.3
MMP28-206ENST00000616383 DIXDC1Q155Q3 683 aa13.16□□□□□ -0.3
MMP28-206ENST00000616383 TMED8Q6PL24 325 aaPredicted RBP13.16□□□□□ -0.3
MMP28-206ENST00000616383 KIAA1211Q6ZU35 1233 aa13.16□□□□□ -0.3
MMP28-206ENST00000616383 LSG1Q9H089 658 aaKnown RBP13.16□□□□□ -0.3
MMP28-206ENST00000616383 SUGT1Q9Y2Z0 365 aa13.16□□□□□ -0.3
MMP28-206ENST00000616383 F8W031 263 aaPredicted RBP13.15□□□□□ -0.3
MMP28-206ENST00000616383 RAD17O75943 681 aa13.15□□□□□ -0.3
MMP28-206ENST00000616383 PTH1RQ03431 593 aa13.15□□□□□ -0.3
MMP28-206ENST00000616383 MIGA1Q8NAN2 632 aa13.15□□□□□ -0.3
MMP28-206ENST00000616383 AIDAQ96BJ3 306 aa13.15□□□□□ -0.3
MMP28-206ENST00000616383 ARMT1Q9H993 441 aa13.15□□□□□ -0.3
MMP28-206ENST00000616383 DDX60LQ5H9U9 1706 aaKnown RBP13.15□□□□□ -0.3
MMP28-206ENST00000616383 MROH7-TTC4A0A0A0MT08 1334 aa13.14□□□□□ -0.31
MMP28-206ENST00000616383 MYH1P12882 1939 aa13.14□□□□□ -0.31
MMP28-206ENST00000616383 MAGEB6P1A0A0J9YX57 407 aa13.14□□□□□ -0.31
MMP28-206ENST00000616383 POTEB3A0JP26 581 aa13.14□□□□□ -0.31
MMP28-206ENST00000616383 PSMD14O00487 310 aa13.14□□□□□ -0.31
MMP28-206ENST00000616383 LMNB1P20700 586 aa13.14□□□□□ -0.31
MMP28-206ENST00000616383 CXCL9Q07325 125 aa13.14□□□□□ -0.31
MMP28-206ENST00000616383 VPS53Q5VIR6 699 aa13.14□□□□□ -0.31
MMP28-206ENST00000616383 POTEBQ6S5H4 581 aa13.14□□□□□ -0.31
MMP28-206ENST00000616383 LCORLQ8N3X6 602 aa13.14□□□□□ -0.31
MMP28-206ENST00000616383 TBC1D32Q96NH3 1257 aa13.14□□□□□ -0.31
MMP28-206ENST00000616383 USP26Q9BXU7 913 aa13.14□□□□□ -0.31
MMP28-206ENST00000616383 C22orf23Q9BZE7 217 aa13.14□□□□□ -0.31
MMP28-206ENST00000616383 TTF2Q9UNY4 1162 aaKnown RBP13.14□□□□□ -0.31
MMP28-206ENST00000616383 MYO3BQ8WXR4 1341 aa13.13□□□□□ -0.31
MMP28-206ENST00000616383 EPB41L2O43491 1005 aaKnown RBP13.13□□□□□ -0.31
MMP28-206ENST00000616383 LDHCP07864 332 aa13.13□□□□□ -0.31
MMP28-206ENST00000616383 DYNLL1P63167 89 aaKnown RBP13.13□□□□□ -0.31
MMP28-206ENST00000616383 CIAPIN1Q6FI81 312 aa13.13□□□□□ -0.31
MMP28-206ENST00000616383 RSBN1LQ6PCB5 846 aaPredicted RBP13.13□□□□□ -0.31
MMP28-206ENST00000616383 KIAA0825Q8IV33 1275 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms