RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 GOLGA6DP0CG33 693 aa11.82□□□□□ -0.52
TNFAIP3-208ENST00000615468 C1orf141Q5JVX7 400 aa11.82□□□□□ -0.52
TNFAIP3-208ENST00000615468 PPFIBP1Q86W92 1011 aa11.82□□□□□ -0.52
TNFAIP3-208ENST00000615468 GNL3LQ9NVN8 582 aaKnown RBP11.82□□□□□ -0.52
TNFAIP3-208ENST00000615468 GOLGA6AQ9NYA3 693 aa11.82□□□□□ -0.52
TNFAIP3-208ENST00000615468 TECPR2O15040 1411 aa11.82□□□□□ -0.52
TNFAIP3-208ENST00000615468 MYO1FO00160 1098 aa11.82□□□□□ -0.52
TNFAIP3-208ENST00000615468 SSBP05455 408 aaKnown RBP eCLIP11.82□□□□□ -0.52
TNFAIP3-208ENST00000615468 NBPF7P0C2Y1 421 aaPredicted RBP11.82□□□□□ -0.52
TNFAIP3-208ENST00000615468 SARNPP82979 210 aaKnown RBP11.82□□□□□ -0.52
TNFAIP3-208ENST00000615468 AIMP1Q12904 312 aaKnown RBP11.82□□□□□ -0.52
TNFAIP3-208ENST00000615468 NEDD9Q14511 834 aa11.82□□□□□ -0.52
TNFAIP3-208ENST00000615468 ADALQ6DHV7 355 aa11.82□□□□□ -0.52
TNFAIP3-208ENST00000615468 STK11IPQ8N1F8 1099 aa11.82□□□□□ -0.52
TNFAIP3-208ENST00000615468 CTCFLQ8NI51 663 aaPredicted RBP11.82□□□□□ -0.52
TNFAIP3-208ENST00000615468 ADCY9O60503 1353 aa11.81□□□□□ -0.52
TNFAIP3-208ENST00000615468 SPTLC2O15270 562 aa11.81□□□□□ -0.52
TNFAIP3-208ENST00000615468 STX10O60499 249 aa11.81□□□□□ -0.52
TNFAIP3-208ENST00000615468 SCRN1Q12765 414 aa11.81□□□□□ -0.52
TNFAIP3-208ENST00000615468 STIM1Q13586 685 aa11.81□□□□□ -0.52
TNFAIP3-208ENST00000615468 CPLX2Q6PUV4 134 aaKnown RBP11.81□□□□□ -0.52
TNFAIP3-208ENST00000615468 ANKRD24Q8TF21 1146 aa11.81□□□□□ -0.52
TNFAIP3-208ENST00000615468 ZNF526Q8TF50 670 aaPredicted RBP11.81□□□□□ -0.52
TNFAIP3-208ENST00000615468 MRPL44Q9H9J2 332 aaKnown RBP11.81□□□□□ -0.52
TNFAIP3-208ENST00000615468 CD248Q9HCU0 757 aa11.81□□□□□ -0.52
TNFAIP3-208ENST00000615468 HOOK1Q9UJC3 728 aaKnown RBP11.81□□□□□ -0.52
TNFAIP3-208ENST00000615468 FER1L4A9Z1Z3 1794 aa11.81□□□□□ -0.52
TNFAIP3-208ENST00000615468 NDUFAB1O14561 156 aa11.81□□□□□ -0.52
TNFAIP3-208ENST00000615468 KCNQ3O43525 872 aa11.81□□□□□ -0.52
TNFAIP3-208ENST00000615468 KRT32Q14532 448 aa11.81□□□□□ -0.52
TNFAIP3-208ENST00000615468 EHD4Q9H223 541 aa11.81□□□□□ -0.52
TNFAIP3-208ENST00000615468 C9orf78Q9NZ63 289 aaPredicted RBP11.81□□□□□ -0.52
TNFAIP3-208ENST00000615468 MAP2P11137 1827 aaKnown RBP11.81□□□□□ -0.52
TNFAIP3-208ENST00000615468 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.81□□□□□ -0.52
TNFAIP3-208ENST00000615468 C3P01024 1663 aa11.81□□□□□ -0.52
TNFAIP3-208ENST00000615468 CDC42BPGQ6DT37 1551 aa11.81□□□□□ -0.52
TNFAIP3-208ENST00000615468 SBNO1A3KN83 1393 aa11.81□□□□□ -0.52
TNFAIP3-208ENST00000615468 SOWAHDA6NJG2 315 aa11.81□□□□□ -0.52
TNFAIP3-208ENST00000615468 GNGT1P63211 74 aa11.81□□□□□ -0.52
TNFAIP3-208ENST00000615468 NCAPHQ15003 741 aa11.81□□□□□ -0.52
TNFAIP3-208ENST00000615468 TAF7Q15545 349 aaPredicted RBP11.81□□□□□ -0.52
TNFAIP3-208ENST00000615468 MAP9Q49MG5 647 aa11.81□□□□□ -0.52
TNFAIP3-208ENST00000615468 KIFC2Q96AC6 838 aa11.81□□□□□ -0.52
TNFAIP3-208ENST00000615468 KAT14Q9H8E8 782 aa11.81□□□□□ -0.52
TNFAIP3-208ENST00000615468 ODF2LQ9ULJ1 636 aa11.81□□□□□ -0.52
TNFAIP3-208ENST00000615468 ZNF330Q9Y3S2 320 aaPredicted RBP11.81□□□□□ -0.52
TNFAIP3-208ENST00000615468 ZEB2O60315 1214 aa11.8□□□□□ -0.52
TNFAIP3-208ENST00000615468 SYKP43405 635 aa11.8□□□□□ -0.52
TNFAIP3-208ENST00000615468 HDGFL1Q5TGJ6 251 aa11.8□□□□□ -0.52
TNFAIP3-208ENST00000615468 PHAXQ9H814 394 aaKnown RBP11.8□□□□□ -0.52
TNFAIP3-208ENST00000615468 STRN4Q9NRL3 753 aa11.8□□□□□ -0.52
TNFAIP3-208ENST00000615468 CLIC4Q9Y696 253 aa11.8□□□□□ -0.52
TNFAIP3-208ENST00000615468 PIP4K2AP48426 406 aaPredicted RBP11.8□□□□□ -0.52
TNFAIP3-208ENST00000615468 CHST3Q7LGC8 479 aa11.8□□□□□ -0.52
TNFAIP3-208ENST00000615468 SLC35F6Q8N357 371 aa11.8□□□□□ -0.52
TNFAIP3-208ENST00000615468 NPHP4O75161 1426 aaPredicted RBP11.8□□□□□ -0.52
TNFAIP3-208ENST00000615468 ELF1P32519 619 aa11.8□□□□□ -0.52
TNFAIP3-208ENST00000615468 ADD1P35611 737 aaKnown RBP11.8□□□□□ -0.52
TNFAIP3-208ENST00000615468 PIP4K2BP78356 416 aa11.8□□□□□ -0.52
TNFAIP3-208ENST00000615468 ACTN3Q08043 901 aaPredicted RBP11.8□□□□□ -0.52
TNFAIP3-208ENST00000615468 PNOCQ13519 176 aa11.8□□□□□ -0.52
TNFAIP3-208ENST00000615468 EGFL6Q8IUX8 553 aa11.8□□□□□ -0.52
TNFAIP3-208ENST00000615468 IL17REQ8NFR9 667 aa11.8□□□□□ -0.52
TNFAIP3-208ENST00000615468 CAGE1Q8TC20 777 aa11.8□□□□□ -0.52
TNFAIP3-208ENST00000615468 RUFY1Q96T51 708 aa11.8□□□□□ -0.52
TNFAIP3-208ENST00000615468 CDC5LQ99459 802 aaKnown RBP11.8□□□□□ -0.52
TNFAIP3-208ENST00000615468 LONRF3Q496Y0 759 aa11.79□□□□□ -0.52
TNFAIP3-208ENST00000615468 NAA16Q6N069 864 aaPredicted RBP11.79□□□□□ -0.52
TNFAIP3-208ENST00000615468 KCNV1Q6PIU1 500 aa11.79□□□□□ -0.52
TNFAIP3-208ENST00000615468 NOA1Q8NC60 698 aaKnown RBP11.79□□□□□ -0.52
TNFAIP3-208ENST00000615468 CAPS2Q9BXY5 557 aa11.79□□□□□ -0.52
TNFAIP3-208ENST00000615468 CDK12Q9NYV4 1490 aaPredicted RBP11.79□□□□□ -0.52
TNFAIP3-208ENST00000615468 CLNS1AP54105 237 aaKnown RBP11.79□□□□□ -0.52
TNFAIP3-208ENST00000615468 G3BP1Q13283 466 aaKnown RBP eCLIP11.79□□□□□ -0.52
TNFAIP3-208ENST00000615468 NAA25Q14CX7 972 aa11.79□□□□□ -0.52
TNFAIP3-208ENST00000615468 NAIF1Q69YI7 327 aaPredicted RBP11.79□□□□□ -0.52
TNFAIP3-208ENST00000615468 SPECC1LQ69YQ0 1117 aa11.79□□□□□ -0.52
TNFAIP3-208ENST00000615468 NCAPH2Q6IBW4 605 aa11.79□□□□□ -0.52
TNFAIP3-208ENST00000615468 RAB11FIP4Q86YS3 637 aa11.79□□□□□ -0.52
TNFAIP3-208ENST00000615468 KCNG4Q8TDN1 519 aa11.79□□□□□ -0.52
TNFAIP3-208ENST00000615468 CAPZA3Q96KX2 299 aa11.79□□□□□ -0.52
TNFAIP3-208ENST00000615468 C19orf44Q9H6X5 657 aa11.79□□□□□ -0.52
TNFAIP3-208ENST00000615468 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.79□□□□□ -0.52
TNFAIP3-208ENST00000615468 AXIN2Q9Y2T1 843 aa11.79□□□□□ -0.52
TNFAIP3-208ENST00000615468 IKBKBO14920 756 aa11.79□□□□□ -0.52
TNFAIP3-208ENST00000615468 GGCXP38435 758 aa11.79□□□□□ -0.52
TNFAIP3-208ENST00000615468 PPARDQ03181 441 aa11.79□□□□□ -0.52
TNFAIP3-208ENST00000615468 SLC39A6Q13433 755 aa11.79□□□□□ -0.52
TNFAIP3-208ENST00000615468 ZNF589Q86UQ0 364 aaPredicted RBP11.79□□□□□ -0.52
TNFAIP3-208ENST00000615468 RNF217Q8TC41 542 aa11.79□□□□□ -0.52
TNFAIP3-208ENST00000615468 EDC3Q96F86 508 aaKnown RBP11.79□□□□□ -0.52
TNFAIP3-208ENST00000615468 HMG20BQ9P0W2 317 aa11.79□□□□□ -0.52
TNFAIP3-208ENST00000615468 PPP1R12AO14974 1030 aaPredicted RBP11.78□□□□□ -0.52
TNFAIP3-208ENST00000615468 PFKFB1P16118 471 aa11.78□□□□□ -0.52
TNFAIP3-208ENST00000615468 PAX7P23759 505 aa11.78□□□□□ -0.52
TNFAIP3-208ENST00000615468 IRAK1P51617 712 aa11.78□□□□□ -0.52
TNFAIP3-208ENST00000615468 FKBP15Q5T1M5 1219 aa11.78□□□□□ -0.52
TNFAIP3-208ENST00000615468 TRMT44Q8IYL2 757 aaKnown RBP11.78□□□□□ -0.52
TNFAIP3-208ENST00000615468 RAPGEF4Q8WZA2 1011 aa11.78□□□□□ -0.52
TNFAIP3-208ENST00000615468 BPIFA3Q9BQP9 254 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms