RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 KCNB2Q92953 911 aa14.36□□□□□ -0.11
MSH6-213ENST00000614496 A0A1W2PQ27 194 aa14.35□□□□□ -0.11
MSH6-213ENST00000614496 A0A1W2PQ64 194 aa14.35□□□□□ -0.11
MSH6-213ENST00000614496 A0A1W2PQD8 194 aa14.35□□□□□ -0.11
MSH6-213ENST00000614496 GABPB1Q06547 395 aaPredicted RBP14.35□□□□□ -0.11
MSH6-213ENST00000614496 PDIA6Q15084 440 aa14.35□□□□□ -0.11
MSH6-213ENST00000614496 DNAJC10Q8IXB1 793 aa14.35□□□□□ -0.11
MSH6-213ENST00000614496 CALCOCO1Q9P1Z2 691 aa14.35□□□□□ -0.11
MSH6-213ENST00000614496 PCDHA5Q9Y5H7 936 aa14.35□□□□□ -0.11
MSH6-213ENST00000614496 BTBD18B2RXH4 712 aa14.35□□□□□ -0.11
MSH6-213ENST00000614496 CTDNEP1O95476 244 aa14.35□□□□□ -0.11
MSH6-213ENST00000614496 ZSCAN20P17040 1043 aaPredicted RBP14.35□□□□□ -0.11
MSH6-213ENST00000614496 TSGA10IPQ3SY00 556 aa14.35□□□□□ -0.11
MSH6-213ENST00000614496 SARM1Q6SZW1 724 aa14.35□□□□□ -0.11
MSH6-213ENST00000614496 CYP27B1O15528 508 aa14.35□□□□□ -0.11
MSH6-213ENST00000614496 TAF3Q5VWG9 929 aa14.35□□□□□ -0.11
MSH6-213ENST00000614496 FMR1NBQ8N0W7 255 aaPredicted RBP14.35□□□□□ -0.11
MSH6-213ENST00000614496 MAGEC2Q9UBF1 373 aaPredicted RBP14.35□□□□□ -0.11
MSH6-213ENST00000614496 KIF23Q02241 960 aaPredicted RBP14.34□□□□□ -0.11
MSH6-213ENST00000614496 SERTAD1Q9UHV2 236 aa14.34□□□□□ -0.11
MSH6-213ENST00000614496 KMT5BQ4FZB7 885 aa14.34□□□□□ -0.11
MSH6-213ENST00000614496 USPL1Q5W0Q7 1092 aa14.34□□□□□ -0.11
MSH6-213ENST00000614496 CCDC47Q96A33 483 aaKnown RBP14.34□□□□□ -0.11
MSH6-213ENST00000614496 TIGD1Q96MW7 591 aa14.34□□□□□ -0.11
MSH6-213ENST00000614496 INCENPQ9NQS7 918 aa14.34□□□□□ -0.11
MSH6-213ENST00000614496 RAD21O60216 631 aa14.34□□□□□ -0.11
MSH6-213ENST00000614496 CYP7A1P22680 504 aa14.34□□□□□ -0.11
MSH6-213ENST00000614496 ACBD3Q9H3P7 528 aa14.34□□□□□ -0.11
MSH6-213ENST00000614496 GOLGA6L9A6NEM1 432 aa14.34□□□□□ -0.11
MSH6-213ENST00000614496 CCT6AP40227 531 aaKnown RBP14.34□□□□□ -0.11
MSH6-213ENST00000614496 PPP2R3AQ06190 1150 aa14.34□□□□□ -0.11
MSH6-213ENST00000614496 UTP14CQ5TAP6 766 aaKnown RBP14.34□□□□□ -0.11
MSH6-213ENST00000614496 CCDC70Q6NSX1 233 aa14.34□□□□□ -0.11
MSH6-213ENST00000614496 RHOXF2BP0C7M4 288 aa14.33□□□□□ -0.12
MSH6-213ENST00000614496 UQCRFS1P1P0C7P4 283 aa14.33□□□□□ -0.12
MSH6-213ENST00000614496 EIF5P55010 431 aaKnown RBP14.33□□□□□ -0.12
MSH6-213ENST00000614496 NLRP5P59047 1200 aa14.33□□□□□ -0.12
MSH6-213ENST00000614496 RBM6P78332 1123 aaKnown RBP14.33□□□□□ -0.12
MSH6-213ENST00000614496 ZNF569Q5MCW4 686 aa14.33□□□□□ -0.12
MSH6-213ENST00000614496 RRAGBQ5VZM2 374 aa14.33□□□□□ -0.12
MSH6-213ENST00000614496 GRAMD1CQ8IYS0 662 aa14.33□□□□□ -0.12
MSH6-213ENST00000614496 RHOXF2Q9BQY4 288 aa14.33□□□□□ -0.12
MSH6-213ENST00000614496 POLR3EQ9NVU0 708 aa14.33□□□□□ -0.12
MSH6-213ENST00000614496 CWC15Q9P013 229 aaKnown RBP14.33□□□□□ -0.12
MSH6-213ENST00000614496 CUTAO60888 179 aa14.33□□□□□ -0.12
MSH6-213ENST00000614496 CCDC175P0C221 793 aa14.33□□□□□ -0.12
MSH6-213ENST00000614496 SLC39A14Q15043 492 aa14.33□□□□□ -0.12
MSH6-213ENST00000614496 ALDH8A1Q9H2A2 487 aaPredicted RBP14.33□□□□□ -0.12
MSH6-213ENST00000614496 GNL3LQ9NVN8 582 aaKnown RBP14.33□□□□□ -0.12
MSH6-213ENST00000614496 MAPK8IP1Q9UQF2 711 aa14.33□□□□□ -0.12
MSH6-213ENST00000614496 TRIM75PA6NK02 468 aa14.33□□□□□ -0.12
MSH6-213ENST00000614496 PHACTR2O75167 634 aa14.33□□□□□ -0.12
MSH6-213ENST00000614496 SEC31AO94979 1220 aaKnown RBP14.33□□□□□ -0.12
MSH6-213ENST00000614496 SYNE4Q8N205 404 aa14.33□□□□□ -0.12
MSH6-213ENST00000614496 ANKRD7Q92527 254 aa14.33□□□□□ -0.12
MSH6-213ENST00000614496 KRT23Q9C075 422 aa14.33□□□□□ -0.12
MSH6-213ENST00000614496 COBLO75128 1261 aa14.32□□□□□ -0.12
MSH6-213ENST00000614496 PRDM1O75626 825 aa14.32□□□□□ -0.12
MSH6-213ENST00000614496 EIF3JO75822 258 aaKnown RBP14.32□□□□□ -0.12
MSH6-213ENST00000614496 AXDND1Q5T1B0 1012 aaPredicted RBP14.32□□□□□ -0.12
MSH6-213ENST00000614496 KIAA1328Q86T90 577 aa14.32□□□□□ -0.12
MSH6-213ENST00000614496 SRRTQ9BXP5 876 aaKnown RBP14.32□□□□□ -0.12
MSH6-213ENST00000614496 RNF41Q9H4P4 317 aaPredicted RBP14.32□□□□□ -0.12
MSH6-213ENST00000614496 SCARF1Q14162 830 aa14.32□□□□□ -0.12
MSH6-213ENST00000614496 POSTNQ15063 836 aa14.32□□□□□ -0.12
MSH6-213ENST00000614496 ZNF174Q15697 407 aa14.32□□□□□ -0.12
MSH6-213ENST00000614496 CATIPQ7Z7H3 387 aa14.32□□□□□ -0.12
MSH6-213ENST00000614496 IQCA1Q86XH1 822 aa14.32□□□□□ -0.12
MSH6-213ENST00000614496 DDX41Q9UJV9 622 aaKnown RBP14.32□□□□□ -0.12
MSH6-213ENST00000614496 SPATA31D1Q6ZQQ2 1576 aa14.32□□□□□ -0.12
MSH6-213ENST00000614496 CCZ1BP86790 482 aa14.32□□□□□ -0.12
MSH6-213ENST00000614496 CCZ1P86791 482 aaPredicted RBP14.32□□□□□ -0.12
MSH6-213ENST00000614496 TCIRG1Q13488 830 aa14.32□□□□□ -0.12
MSH6-213ENST00000614496 LONRF3Q496Y0 759 aa14.32□□□□□ -0.12
MSH6-213ENST00000614496 CTCFLQ8NI51 663 aaPredicted RBP14.32□□□□□ -0.12
MSH6-213ENST00000614496 TRIM34Q9BYJ4 488 aa14.32□□□□□ -0.12
MSH6-213ENST00000614496 ARHGAP6O43182 974 aa14.31□□□□□ -0.12
MSH6-213ENST00000614496 IL2RBP14784 551 aa14.31□□□□□ -0.12
MSH6-213ENST00000614496 EXOSC10Q01780 885 aaKnown RBP14.31□□□□□ -0.12
MSH6-213ENST00000614496 NUTM2AQ8IVF1 878 aaPredicted RBP14.31□□□□□ -0.12
MSH6-213ENST00000614496 ST7Q9NRC1 585 aa14.31□□□□□ -0.12
MSH6-213ENST00000614496 ZNHIT6Q9NWK9 470 aaKnown RBP14.31□□□□□ -0.12
MSH6-213ENST00000614496 KIF28PB7ZC32 967 aa14.31□□□□□ -0.12
MSH6-213ENST00000614496 H7C1W4 665 aa14.31□□□□□ -0.12
MSH6-213ENST00000614496 RFX5P48382 616 aaPredicted RBP14.31□□□□□ -0.12
MSH6-213ENST00000614496 KANK3Q6NY19 840 aa14.31□□□□□ -0.12
MSH6-213ENST00000614496 IGSF22Q8N9C0 903 aa14.31□□□□□ -0.12
MSH6-213ENST00000614496 GOLGA1Q92805 767 aa14.31□□□□□ -0.12
MSH6-213ENST00000614496 TMEM87BQ96K49 555 aa14.31□□□□□ -0.12
MSH6-213ENST00000614496 EPC1Q9H2F5 836 aa14.31□□□□□ -0.12
MSH6-213ENST00000614496 ANKARQ7Z5J8 1434 aa14.31□□□□□ -0.12
MSH6-213ENST00000614496 TMEM232C9JQI7 657 aa14.31□□□□□ -0.12
MSH6-213ENST00000614496 APOA5Q6Q788 366 aa14.31□□□□□ -0.12
MSH6-213ENST00000614496 KRBA2Q6ZNG9 492 aa14.31□□□□□ -0.12
MSH6-213ENST00000614496 PPP2R2CQ9Y2T4 447 aa14.31□□□□□ -0.12
MSH6-213ENST00000614496 VWA3AA6NCI4 1184 aa14.3□□□□□ -0.12
MSH6-213ENST00000614496 CTIFO43310 598 aaKnown RBP14.3□□□□□ -0.12
MSH6-213ENST00000614496 PHKA1P46020 1223 aa14.3□□□□□ -0.12
MSH6-213ENST00000614496 ARMCX5Q6P1M9 558 aa14.3□□□□□ -0.12
MSH6-213ENST00000614496 ATG9AQ7Z3C6 839 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms