RNA–Protein interactions for RNA: ENST00000614293.4

ABCA2-223, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5 BASIC

Gene ABCA2, Length 8,146 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-223	ENST00000614293		A6NNZ2	444 aa		13.63	□□□□□ -0.23
ABCA2-223	ENST00000614293	HSPA1L	P34931	641 aa		13.63	□□□□□ -0.23
ABCA2-223	ENST00000614293	TUBB8	Q3ZCM7	444 aa		13.63	□□□□□ -0.23
ABCA2-223	ENST00000614293	LMCD1	Q9NZU5	365 aa		13.63	□□□□□ -0.23
ABCA2-223	ENST00000614293	ADGRL1	O94910	1474 aa		13.63	□□□□□ -0.23
ABCA2-223	ENST00000614293	KIAA0586	Q9BVV6	1533 aa		13.63	□□□□□ -0.23
ABCA2-223	ENST00000614293	RAPGEF6	Q8TEU7	1601 aa		13.63	□□□□□ -0.23
ABCA2-223	ENST00000614293	SH3BGR	P55822	239 aa	Predicted RBP	13.63	□□□□□ -0.23
ABCA2-223	ENST00000614293	SNW1	Q13573	536 aa	Known RBP	13.63	□□□□□ -0.23
ABCA2-223	ENST00000614293	FAM47C	Q5HY64	1035 aa		13.63	□□□□□ -0.23
ABCA2-223	ENST00000614293	LGSN	Q5TDP6	509 aa		13.63	□□□□□ -0.23
ABCA2-223	ENST00000614293	DZIP3	Q86Y13	1208 aa	Known RBP	13.63	□□□□□ -0.23
ABCA2-223	ENST00000614293	ALG1	Q9BT22	464 aa		13.63	□□□□□ -0.23
ABCA2-223	ENST00000614293	CCPG1	Q9ULG6	757 aa		13.63	□□□□□ -0.23
ABCA2-223	ENST00000614293	PTPDC1	A2A3K4	754 aa		13.62	□□□□□ -0.23
ABCA2-223	ENST00000614293	ATF7	P17544	494 aa	Predicted RBP	13.62	□□□□□ -0.23
ABCA2-223	ENST00000614293	FYB2	Q5VWT5	728 aa		13.62	□□□□□ -0.23
ABCA2-223	ENST00000614293	FERMT3	Q86UX7	667 aa		13.62	□□□□□ -0.23
ABCA2-223	ENST00000614293	GCNA	Q96QF7	691 aa		13.62	□□□□□ -0.23
ABCA2-223	ENST00000614293	SLC8A2	Q9UPR5	921 aa		13.62	□□□□□ -0.23
ABCA2-223	ENST00000614293	ABI1	Q8IZP0	508 aa		13.62	□□□□□ -0.23
ABCA2-223	ENST00000614293	STMN2	Q93045	179 aa		13.62	□□□□□ -0.23
ABCA2-223	ENST00000614293	XPA	P23025	273 aa	Predicted RBP	13.62	□□□□□ -0.23
ABCA2-223	ENST00000614293	C1orf228	Q6PIY5	440 aa		13.62	□□□□□ -0.23
ABCA2-223	ENST00000614293	TRIML1	Q8N9V2	468 aa		13.62	□□□□□ -0.23
ABCA2-223	ENST00000614293	CCDC26	Q8TAB7	109 aa		13.62	□□□□□ -0.23
ABCA2-223	ENST00000614293	SEC62	Q99442	399 aa	Known RBP	13.62	□□□□□ -0.23
ABCA2-223	ENST00000614293	CDK13	Q14004	1512 aa	Known RBP	13.62	□□□□□ -0.23
ABCA2-223	ENST00000614293	UBASH3A	P57075	661 aa		13.62	□□□□□ -0.23
ABCA2-223	ENST00000614293	LARGE2	Q8N3Y3	721 aa		13.62	□□□□□ -0.23
ABCA2-223	ENST00000614293	VCX3B	Q9H321	246 aa		13.62	□□□□□ -0.23
ABCA2-223	ENST00000614293	UBL4B	Q8N7F7	174 aa		13.62	□□□□□ -0.23
ABCA2-223	ENST00000614293	MGEA5	O60502	916 aa		13.62	□□□□□ -0.23
ABCA2-223	ENST00000614293	PPFIA3	O75145	1194 aa		13.62	□□□□□ -0.23
ABCA2-223	ENST00000614293	HARS	P12081	509 aa	Known RBP	13.62	□□□□□ -0.23
ABCA2-223	ENST00000614293	TTC31	Q49AM3	519 aa	Predicted RBP	13.62	□□□□□ -0.23
ABCA2-223	ENST00000614293	OTUD6A	Q7L8S5	288 aa		13.62	□□□□□ -0.23
ABCA2-223	ENST00000614293	SRRT	Q9BXP5	876 aa	Known RBP	13.62	□□□□□ -0.23
ABCA2-223	ENST00000614293	CETN3	O15182	167 aa		13.61	□□□□□ -0.23
ABCA2-223	ENST00000614293	POLR2B	P30876	1174 aa	Known RBP	13.61	□□□□□ -0.23
ABCA2-223	ENST00000614293	C10orf67	Q8IYJ2	551 aa		13.61	□□□□□ -0.23
ABCA2-223	ENST00000614293	ZKSCAN3	Q9BRR0	538 aa		13.61	□□□□□ -0.23
ABCA2-223	ENST00000614293	MED10	Q9BTT4	135 aa		13.61	□□□□□ -0.23
ABCA2-223	ENST00000614293	SNAPC4	Q5SXM2	1469 aa		13.61	□□□□□ -0.23
ABCA2-223	ENST00000614293	CASQ2	O14958	399 aa	Predicted RBP	13.61	□□□□□ -0.23
ABCA2-223	ENST00000614293	IL2RB	P14784	551 aa		13.61	□□□□□ -0.23
ABCA2-223	ENST00000614293	HAND2	P61296	217 aa		13.61	□□□□□ -0.23
ABCA2-223	ENST00000614293	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.61	□□□□□ -0.23
ABCA2-223	ENST00000614293	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	13.61	□□□□□ -0.23
ABCA2-223	ENST00000614293	AFM	P43652	599 aa		13.61	□□□□□ -0.23
ABCA2-223	ENST00000614293	DCPS	Q96C86	337 aa	Known RBP	13.61	□□□□□ -0.23
ABCA2-223	ENST00000614293	STMN1	P16949	149 aa		13.61	□□□□□ -0.23
ABCA2-223	ENST00000614293	CDCA7L	Q96GN5	454 aa		13.61	□□□□□ -0.23
ABCA2-223	ENST00000614293	ARFGAP3	Q9NP61	516 aa		13.61	□□□□□ -0.23
ABCA2-223	ENST00000614293	DENND2A	Q9ULE3	1009 aa		13.61	□□□□□ -0.23
ABCA2-223	ENST00000614293	CEP120	Q8N960	986 aa		13.61	□□□□□ -0.23
ABCA2-223	ENST00000614293	PLEKHG3	A1L390	1219 aa		13.6	□□□□□ -0.23
ABCA2-223	ENST00000614293	WASL	O00401	505 aa	Predicted RBP	13.6	□□□□□ -0.23
ABCA2-223	ENST00000614293	UVSSA	Q2YD98	709 aa		13.6	□□□□□ -0.23
ABCA2-223	ENST00000614293	TMEM57	Q8N5G2	664 aa		13.6	□□□□□ -0.23
ABCA2-223	ENST00000614293	USP48	Q86UV5	1035 aa		13.6	□□□□□ -0.23
ABCA2-223	ENST00000614293	UAP1	Q16222	522 aa	Predicted RBP	13.6	□□□□□ -0.23
ABCA2-223	ENST00000614293	RASSF4	Q9H2L5	321 aa		13.6	□□□□□ -0.23
ABCA2-223	ENST00000614293	NFKBIA	P25963	317 aa		13.6	□□□□□ -0.23
ABCA2-223	ENST00000614293	TERF1	P54274	439 aa		13.6	□□□□□ -0.23
ABCA2-223	ENST00000614293	ZBTB33	Q86T24	672 aa		13.6	□□□□□ -0.23
ABCA2-223	ENST00000614293	BCAP29	Q9UHQ4	241 aa		13.6	□□□□□ -0.23
ABCA2-223	ENST00000614293	NSD2	O96028	1365 aa		13.6	□□□□□ -0.23
ABCA2-223	ENST00000614293	CDR2	Q01850	454 aa		13.6	□□□□□ -0.23
ABCA2-223	ENST00000614293	SELENOS	Q9BQE4	189 aa		13.6	□□□□□ -0.23
ABCA2-223	ENST00000614293	PRPF38A	Q8NAV1	312 aa	Known RBP	13.59	□□□□□ -0.23
ABCA2-223	ENST00000614293	TTC1	Q99614	292 aa		13.59	□□□□□ -0.23
ABCA2-223	ENST00000614293	TRIM56	Q9BRZ2	755 aa	Known RBP	13.59	□□□□□ -0.23
ABCA2-223	ENST00000614293	NKIRAS1	Q9NYS0	192 aa		13.59	□□□□□ -0.23
ABCA2-223	ENST00000614293	KRT3	P12035	628 aa		13.59	□□□□□ -0.23
ABCA2-223	ENST00000614293	RPS6KA2	Q15349	733 aa		13.59	□□□□□ -0.23
ABCA2-223	ENST00000614293	IL15	P40933	162 aa	Predicted RBP	13.59	□□□□□ -0.23
ABCA2-223	ENST00000614293	DCAF15	Q66K64	600 aa		13.59	□□□□□ -0.23
ABCA2-223	ENST00000614293	CCDC25	Q86WR0	208 aa		13.59	□□□□□ -0.23
ABCA2-223	ENST00000614293	PALM2	Q8IXS6	379 aa		13.59	□□□□□ -0.23
ABCA2-223	ENST00000614293	HAUS1	Q96CS2	278 aa		13.59	□□□□□ -0.23
ABCA2-223	ENST00000614293	ANO3	Q9BYT9	981 aa		13.59	□□□□□ -0.23
ABCA2-223	ENST00000614293	RNF216	Q9NWF9	866 aa	Predicted RBP	13.59	□□□□□ -0.23
ABCA2-223	ENST00000614293	ARHGEF35	A5YM69	484 aa		13.59	□□□□□ -0.23
ABCA2-223	ENST00000614293	TRIM75P	A6NK02	468 aa		13.59	□□□□□ -0.23
ABCA2-223	ENST00000614293	NUCB1	Q02818	461 aa		13.59	□□□□□ -0.23
ABCA2-223	ENST00000614293	GNPAT	O15228	680 aa		13.59	□□□□□ -0.23
ABCA2-223	ENST00000614293	FLII	Q13045	1269 aa		13.59	□□□□□ -0.23
ABCA2-223	ENST00000614293	PDZD4	Q76G19	769 aa	Predicted RBP	13.59	□□□□□ -0.23
ABCA2-223	ENST00000614293	NOP9	Q86U38	636 aa	Known RBP	13.59	□□□□□ -0.23
ABCA2-223	ENST00000614293	GJB2	P29033	226 aa		13.58	□□□□□ -0.23
ABCA2-223	ENST00000614293	SV2B	Q7L1I2	683 aa		13.58	□□□□□ -0.23
ABCA2-223	ENST00000614293	MIPOL1	Q8TD10	442 aa		13.58	□□□□□ -0.23
ABCA2-223	ENST00000614293	TTLL3	Q9Y4R7	772 aa		13.58	□□□□□ -0.23
ABCA2-223	ENST00000614293	BIN1	O00499	593 aa		13.58	□□□□□ -0.23
ABCA2-223	ENST00000614293	ABL1	P00519	1130 aa		13.58	□□□□□ -0.23
ABCA2-223	ENST00000614293	PPP2R5C	Q13362	524 aa		13.58	□□□□□ -0.23
ABCA2-223	ENST00000614293	MCMDC2	Q4G0Z9	681 aa		13.58	□□□□□ -0.23
ABCA2-223	ENST00000614293	LEO1	Q8WVC0	666 aa	Predicted RBP	13.58	□□□□□ -0.23
ABCA2-223	ENST00000614293	MIS12	Q9H081	205 aa		13.58	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms