RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 HHIPL2Q6UWX4 724 aa16.43■□□□□ 0.22
TMEM254-213ENST00000613758 RASEFQ8IZ41 740 aa16.43■□□□□ 0.22
TMEM254-213ENST00000613758 DAGLAQ9Y4D2 1042 aa16.43■□□□□ 0.22
TMEM254-213ENST00000613758 SNX14Q9Y5W7 946 aa16.43■□□□□ 0.22
TMEM254-213ENST00000613758 ZKSCAN1P17029 563 aaPredicted RBP16.42■□□□□ 0.22
TMEM254-213ENST00000613758 TNIP1Q15025 636 aa16.42■□□□□ 0.22
TMEM254-213ENST00000613758 ALX1Q15699 326 aa16.42■□□□□ 0.22
TMEM254-213ENST00000613758 IFNL3Q8IZI9 196 aa16.42■□□□□ 0.22
TMEM254-213ENST00000613758 TEKT1Q969V4 418 aa16.42■□□□□ 0.22
TMEM254-213ENST00000613758 CRNKL1Q9BZJ0 848 aaKnown RBP16.42■□□□□ 0.22
TMEM254-213ENST00000613758 RPAP1Q9BWH6 1393 aaPredicted RBP16.42■□□□□ 0.22
TMEM254-213ENST00000613758 FZD9O00144 591 aa16.41■□□□□ 0.22
TMEM254-213ENST00000613758 HDLBPQ00341 1268 aaKnown RBP16.41■□□□□ 0.22
TMEM254-213ENST00000613758 CERS3Q8IU89 383 aa16.41■□□□□ 0.22
TMEM254-213ENST00000613758 SH3RF3Q8TEJ3 882 aaPredicted RBP16.41■□□□□ 0.22
TMEM254-213ENST00000613758 GMLQ99445 158 aa16.41■□□□□ 0.22
TMEM254-213ENST00000613758 NACAP1Q9BZK3 213 aa16.41■□□□□ 0.22
TMEM254-213ENST00000613758 ZBTB12Q9Y330 459 aaPredicted RBP16.41■□□□□ 0.22
TMEM254-213ENST00000613758 MYH2Q9UKX2 1941 aa16.41■□□□□ 0.22
TMEM254-213ENST00000613758 ZNF646O15015 1829 aaPredicted RBP16.41■□□□□ 0.22
TMEM254-213ENST00000613758 CRKP46108 304 aa16.41■□□□□ 0.22
TMEM254-213ENST00000613758 EIF6P56537 245 aaKnown RBP16.41■□□□□ 0.22
TMEM254-213ENST00000613758 GPR162Q16538 588 aa16.41■□□□□ 0.22
TMEM254-213ENST00000613758 AGBL3Q8NEM8 1001 aa16.41■□□□□ 0.22
TMEM254-213ENST00000613758 SDR42E1Q8WUS8 393 aa16.41■□□□□ 0.22
TMEM254-213ENST00000613758 SNX21Q969T3 373 aa16.41■□□□□ 0.22
TMEM254-213ENST00000613758 IL17RAQ96F46 866 aa16.41■□□□□ 0.22
TMEM254-213ENST00000613758 EPB41L4AQ9HCS5 686 aaPredicted RBP16.41■□□□□ 0.22
TMEM254-213ENST00000613758 DAXXQ9UER7 740 aaPredicted RBP16.41■□□□□ 0.22
TMEM254-213ENST00000613758 PSME4Q14997 1843 aa16.4■□□□□ 0.22
TMEM254-213ENST00000613758 CYP21A2P08686 494 aa16.4■□□□□ 0.22
TMEM254-213ENST00000613758 PLCG2P16885 1265 aa16.4■□□□□ 0.22
TMEM254-213ENST00000613758 NAPBQ9H115 298 aa16.4■□□□□ 0.22
TMEM254-213ENST00000613758 SERPINA10Q9UK55 444 aa16.4■□□□□ 0.22
TMEM254-213ENST00000613758 TDO2P48775 406 aa16.39■□□□□ 0.21
TMEM254-213ENST00000613758 RBM5P52756 815 aaKnown RBP eCLIP16.39■□□□□ 0.21
TMEM254-213ENST00000613758 IMMTQ16891 758 aaKnown RBP16.39■□□□□ 0.21
TMEM254-213ENST00000613758 TSGA10IPQ3SY00 556 aa16.39■□□□□ 0.21
TMEM254-213ENST00000613758 ZDHHC15Q96MV8 337 aa16.39■□□□□ 0.21
TMEM254-213ENST00000613758 TAF6LQ9Y6J9 622 aa16.39■□□□□ 0.21
TMEM254-213ENST00000613758 ZMYM6O95789 1325 aa16.39■□□□□ 0.21
TMEM254-213ENST00000613758 RHBDL3P58872 404 aa16.38■□□□□ 0.21
TMEM254-213ENST00000613758 RABEP1Q15276 862 aa16.38■□□□□ 0.21
TMEM254-213ENST00000613758 APOBEC3HQ6NTF7 200 aaKnown RBP16.38■□□□□ 0.21
TMEM254-213ENST00000613758 GIMAP6Q6P9H5 292 aa16.38■□□□□ 0.21
TMEM254-213ENST00000613758 ATP8A2Q9NTI2 1148 aa16.38■□□□□ 0.21
TMEM254-213ENST00000613758 HDAC9Q9UKV0 1011 aa16.38■□□□□ 0.21
TMEM254-213ENST00000613758 ZNF213O14771 459 aa16.38■□□□□ 0.21
TMEM254-213ENST00000613758 CD2BP2O95400 341 aaKnown RBP16.38■□□□□ 0.21
TMEM254-213ENST00000613758 HAND2P61296 217 aa16.38■□□□□ 0.21
TMEM254-213ENST00000613758 TEX11Q8IYF3 940 aa16.38■□□□□ 0.21
TMEM254-213ENST00000613758 OGFOD1Q8N543 542 aa16.38■□□□□ 0.21
TMEM254-213ENST00000613758 GOLGB1Q14789 3259 aaKnown RBP16.38■□□□□ 0.21
TMEM254-213ENST00000613758 USP17L8P0C7I0 530 aa16.37■□□□□ 0.21
TMEM254-213ENST00000613758 USP5P45974 858 aa16.37■□□□□ 0.21
TMEM254-213ENST00000613758 ADCK5Q3MIX3 580 aa16.37■□□□□ 0.21
TMEM254-213ENST00000613758 TGFBRAP1Q8WUH2 860 aa16.37■□□□□ 0.21
TMEM254-213ENST00000613758 DCP1AQ9NPI6 582 aaPredicted RBP16.37■□□□□ 0.21
TMEM254-213ENST00000613758 USP40Q9NVE5 1235 aa16.37■□□□□ 0.21
TMEM254-213ENST00000613758 GJA3Q9Y6H8 435 aa16.37■□□□□ 0.21
TMEM254-213ENST00000613758 KRT32Q14532 448 aa16.37■□□□□ 0.21
TMEM254-213ENST00000613758 CFAP100Q494V2 611 aa16.37■□□□□ 0.21
TMEM254-213ENST00000613758 RNF181Q9P0P0 153 aa16.37■□□□□ 0.21
TMEM254-213ENST00000613758 PCDHAC2Q9Y5I4 1007 aa16.37■□□□□ 0.21
TMEM254-213ENST00000613758 ZNF541Q9H0D2 1346 aa16.36■□□□□ 0.21
TMEM254-213ENST00000613758 GRIN3BO60391 1043 aa16.36■□□□□ 0.21
TMEM254-213ENST00000613758 RPS12P25398 132 aaKnown RBP16.36■□□□□ 0.21
TMEM254-213ENST00000613758 CDC42EP5Q6NZY7 148 aa16.36■□□□□ 0.21
TMEM254-213ENST00000613758 JAKMIP1Q96N16 626 aaKnown RBP16.36■□□□□ 0.21
TMEM254-213ENST00000613758 PSMA5P28066 241 aa16.36■□□□□ 0.21
TMEM254-213ENST00000613758 C9orf131Q5VYM1 1079 aa16.36■□□□□ 0.21
TMEM254-213ENST00000613758 TM6SF1Q9BZW5 370 aa16.36■□□□□ 0.21
TMEM254-213ENST00000613758 MKRN1Q9UHC7 482 aaKnown RBP16.36■□□□□ 0.21
TMEM254-213ENST00000613758 SBF1O95248 1867 aa16.35■□□□□ 0.21
TMEM254-213ENST00000613758 CTR9Q6PD62 1173 aa16.35■□□□□ 0.21
TMEM254-213ENST00000613758 MAPKAPK5Q8IW41 473 aa16.35■□□□□ 0.21
TMEM254-213ENST00000613758 HSCBQ8IWL3 235 aa16.35■□□□□ 0.21
TMEM254-213ENST00000613758 MINDY4BA8MYZ0 360 aa16.34■□□□□ 0.21
TMEM254-213ENST00000613758 USP17L12C9JPN9 530 aa16.34■□□□□ 0.21
TMEM254-213ENST00000613758 USP17L21D6R901 530 aa16.34■□□□□ 0.21
TMEM254-213ENST00000613758 E7EWF7 191 aa16.34■□□□□ 0.21
TMEM254-213ENST00000613758 CASTP20810 708 aaKnown RBP16.34■□□□□ 0.21
TMEM254-213ENST00000613758 GMPSP49915 693 aaPredicted RBP16.34■□□□□ 0.21
TMEM254-213ENST00000613758 NEK4P51957 841 aa16.34■□□□□ 0.21
TMEM254-213ENST00000613758 DLGAP5Q15398 846 aa16.34■□□□□ 0.21
TMEM254-213ENST00000613758 STOX1Q6ZVD7 989 aa16.34■□□□□ 0.21
TMEM254-213ENST00000613758 PRMT6Q96LA8 375 aaPredicted RBP16.34■□□□□ 0.21
TMEM254-213ENST00000613758 UPF3BQ9BZI7 483 aaKnown RBP16.34■□□□□ 0.21
TMEM254-213ENST00000613758 NBPF3Q9H094 633 aa16.34■□□□□ 0.21
TMEM254-213ENST00000613758 MCM9Q9NXL9 1143 aa16.34■□□□□ 0.21
TMEM254-213ENST00000613758 ADAMTSL1Q8N6G6 1762 aa16.34■□□□□ 0.21
TMEM254-213ENST00000613758 MMP14P50281 582 aa16.34■□□□□ 0.21
TMEM254-213ENST00000613758 DPF2Q92785 391 aa16.34■□□□□ 0.21
TMEM254-213ENST00000613758 NEK1Q96PY6 1258 aa16.34■□□□□ 0.21
TMEM254-213ENST00000613758 ZSWIM6Q9HCJ5 1215 aa16.34■□□□□ 0.21
TMEM254-213ENST00000613758 DICER1Q9UPY3 1922 aaKnown RBP16.33■□□□□ 0.21
TMEM254-213ENST00000613758 WDHD1O75717 1129 aaPredicted RBP16.33■□□□□ 0.2
TMEM254-213ENST00000613758 CTDSPL2Q05D32 466 aa16.33■□□□□ 0.2
TMEM254-213ENST00000613758 PPARAQ07869 468 aa16.33■□□□□ 0.2
TMEM254-213ENST00000613758 SBK1Q52WX2 424 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms