RNA–Protein interactions for RNA: ENST00000612023.1

LINC02139-201, Transcript of long intergenic non-protein coding RNA 2139, humanhuman

TSL 1 (best) BASIC

Gene LINC02139, Length 2,005 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02139-201ENST00000612023 CASC1Q6TDU7 716 aa13.19□□□□□ -0.3
LINC02139-201ENST00000612023 C3orf67Q6ZVT6 689 aa13.19□□□□□ -0.3
LINC02139-201ENST00000612023 C16orf71Q8IYS4 520 aaPredicted RBP13.19□□□□□ -0.3
LINC02139-201ENST00000612023 PHAXQ9H814 394 aaKnown RBP13.19□□□□□ -0.3
LINC02139-201ENST00000612023 LRRC4BQ9NT99 713 aa13.19□□□□□ -0.3
LINC02139-201ENST00000612023 DDX56Q9NY93 547 aaKnown RBP13.19□□□□□ -0.3
LINC02139-201ENST00000612023 PTCD1O75127 700 aaKnown RBP13.18□□□□□ -0.3
LINC02139-201ENST00000612023 GCGRP47871 477 aa13.18□□□□□ -0.3
LINC02139-201ENST00000612023 DAB2P98082 770 aa13.18□□□□□ -0.3
LINC02139-201ENST00000612023 FMNL2Q96PY5 1086 aa13.18□□□□□ -0.3
LINC02139-201ENST00000612023 OSBPL3Q9H4L5 887 aa13.18□□□□□ -0.3
LINC02139-201ENST00000612023 PRDM10Q9NQV6 1147 aa13.18□□□□□ -0.3
LINC02139-201ENST00000612023 CHMP5Q9NZZ3 219 aa13.18□□□□□ -0.3
LINC02139-201ENST00000612023 DNAJB2P25686 324 aa13.18□□□□□ -0.3
LINC02139-201ENST00000612023 PIP4K2AP48426 406 aaPredicted RBP13.18□□□□□ -0.3
LINC02139-201ENST00000612023 APLP1P51693 650 aa13.18□□□□□ -0.3
LINC02139-201ENST00000612023 ATP8B2P98198 1209 aa13.18□□□□□ -0.3
LINC02139-201ENST00000612023 DNAAF2Q9NVR5 837 aaKnown RBP13.18□□□□□ -0.3
LINC02139-201ENST00000612023 CACNA1FO60840 1977 aa13.18□□□□□ -0.3
LINC02139-201ENST00000612023 LAMB4A4D0S4 1761 aa13.17□□□□□ -0.3
LINC02139-201ENST00000612023 TUBGCP6Q96RT7 1819 aa13.17□□□□□ -0.3
LINC02139-201ENST00000612023 C6orf229H3BNL8 230 aa13.17□□□□□ -0.3
LINC02139-201ENST00000612023 PRPF40AO75400 957 aaKnown RBP13.17□□□□□ -0.3
LINC02139-201ENST00000612023 EIF3JO75822 258 aaKnown RBP13.17□□□□□ -0.3
LINC02139-201ENST00000612023 PROSER3Q2NL68 480 aa13.17□□□□□ -0.3
LINC02139-201ENST00000612023 PCDHGB7Q9Y5F8 929 aa13.17□□□□□ -0.3
LINC02139-201ENST00000612023 RACK1P63244 317 aaKnown RBP13.17□□□□□ -0.3
LINC02139-201ENST00000612023 ZNF394Q53GI3 561 aa13.17□□□□□ -0.3
LINC02139-201ENST00000612023 ZNF496Q96IT1 587 aaPredicted RBP13.17□□□□□ -0.3
LINC02139-201ENST00000612023 KIF2CQ99661 725 aa13.17□□□□□ -0.3
LINC02139-201ENST00000612023 TEX13AQ9BXU3 409 aaPredicted RBP13.17□□□□□ -0.3
LINC02139-201ENST00000612023 HEG1Q9ULI3 1381 aa13.17□□□□□ -0.3
LINC02139-201ENST00000612023 UBR3Q6ZT12 1888 aa13.16□□□□□ -0.3
LINC02139-201ENST00000612023 PHTF2Q8N3S3 785 aa13.16□□□□□ -0.3
LINC02139-201ENST00000612023 SYMPKQ92797 1274 aaKnown RBP13.16□□□□□ -0.3
LINC02139-201ENST00000612023 WWC3Q9ULE0 1092 aa13.16□□□□□ -0.3
LINC02139-201ENST00000612023 STK10O94804 968 aaKnown RBP13.15□□□□□ -0.3
LINC02139-201ENST00000612023 FGRP09769 529 aa13.15□□□□□ -0.3
LINC02139-201ENST00000612023 XRCC5P13010 732 aaKnown RBP13.15□□□□□ -0.3
LINC02139-201ENST00000612023 SDSP20132 328 aa13.15□□□□□ -0.3
LINC02139-201ENST00000612023 POLD1P28340 1107 aa13.15□□□□□ -0.3
LINC02139-201ENST00000612023 TBX4P57082 545 aa13.15□□□□□ -0.3
LINC02139-201ENST00000612023 OTUD7AQ8TE49 926 aaPredicted RBP13.15□□□□□ -0.3
LINC02139-201ENST00000612023 SETDB2Q96T68 719 aa13.15□□□□□ -0.3
LINC02139-201ENST00000612023 LRRCC1Q9C099 1032 aa13.15□□□□□ -0.3
LINC02139-201ENST00000612023 UBA5Q9GZZ9 404 aa13.15□□□□□ -0.3
LINC02139-201ENST00000612023 USP44Q9H0E7 712 aa13.15□□□□□ -0.3
LINC02139-201ENST00000612023 USP16Q9Y5T5 823 aa13.15□□□□□ -0.3
LINC02139-201ENST00000612023 COL24A1Q17RW2 1714 aa13.15□□□□□ -0.3
LINC02139-201ENST00000612023 S100BP04271 92 aaPredicted RBP13.15□□□□□ -0.3
LINC02139-201ENST00000612023 UBTFL1P0CB47 393 aaPredicted RBP13.15□□□□□ -0.3
LINC02139-201ENST00000612023 MAPK8P45983 427 aa13.15□□□□□ -0.3
LINC02139-201ENST00000612023 KCNQ4P56696 695 aa13.15□□□□□ -0.3
LINC02139-201ENST00000612023 SLC4A9Q96Q91 983 aa13.15□□□□□ -0.3
LINC02139-201ENST00000612023 SRCIN1Q9C0H9 1055 aa13.15□□□□□ -0.3
LINC02139-201ENST00000612023 CEP126Q9P2H0 1117 aa13.15□□□□□ -0.3
LINC02139-201ENST00000612023 PDE1AP54750 535 aa13.14□□□□□ -0.31
LINC02139-201ENST00000612023 ITPK1Q13572 414 aa13.14□□□□□ -0.31
LINC02139-201ENST00000612023 RC3H1Q5TC82 1133 aaKnown RBP13.14□□□□□ -0.31
LINC02139-201ENST00000612023 FMNL3Q8IVF7 1028 aa13.14□□□□□ -0.31
LINC02139-201ENST00000612023 LINC00116Q8NCU8 138 aa13.14□□□□□ -0.31
LINC02139-201ENST00000612023 SLC16A10Q8TF71 515 aa13.14□□□□□ -0.31
LINC02139-201ENST00000612023 CNTNAP4Q9C0A0 1308 aa13.14□□□□□ -0.31
LINC02139-201ENST00000612023 ENPP3O14638 875 aa13.13□□□□□ -0.31
LINC02139-201ENST00000612023 SNRPA1P09661 255 aaKnown RBP13.13□□□□□ -0.31
LINC02139-201ENST00000612023 DSC3Q14574 896 aa13.13□□□□□ -0.31
LINC02139-201ENST00000612023 PCDH10Q9P2E7 1040 aa13.13□□□□□ -0.31
LINC02139-201ENST00000612023 MYH14Q7Z406 1995 aaKnown RBP13.13□□□□□ -0.31
LINC02139-201ENST00000612023 ADCY9O60503 1353 aa13.13□□□□□ -0.31
LINC02139-201ENST00000612023 PNMA6EA0A0J9YXQ4 647 aa13.13□□□□□ -0.31
LINC02139-201ENST00000612023 DNAJC6O75061 913 aa13.13□□□□□ -0.31
LINC02139-201ENST00000612023 REC8O95072 547 aa13.13□□□□□ -0.31
LINC02139-201ENST00000612023 STARD3NLO95772 234 aa13.13□□□□□ -0.31
LINC02139-201ENST00000612023 PAX3P23760 479 aa13.13□□□□□ -0.31
LINC02139-201ENST00000612023 PSMD2Q13200 908 aa13.13□□□□□ -0.31
LINC02139-201ENST00000612023 NUDT18Q6ZVK8 323 aa13.13□□□□□ -0.31
LINC02139-201ENST00000612023 SIX5Q8N196 739 aa13.13□□□□□ -0.31
LINC02139-201ENST00000612023 USP26Q9BXU7 913 aa13.13□□□□□ -0.31
LINC02139-201ENST00000612023 TFCP2L1Q9NZI6 479 aa13.13□□□□□ -0.31
LINC02139-201ENST00000612023 DBF4Q9UBU7 674 aaPredicted RBP13.13□□□□□ -0.31
LINC02139-201ENST00000612023 DDX41Q9UJV9 622 aaKnown RBP13.13□□□□□ -0.31
LINC02139-201ENST00000612023 EXOC6BQ9Y2D4 811 aa13.13□□□□□ -0.31
LINC02139-201ENST00000612023 LRRFIP2Q9Y608 721 aaKnown RBP13.13□□□□□ -0.31
LINC02139-201ENST00000612023 IBTKQ9P2D0 1353 aaPredicted RBP13.12□□□□□ -0.31
LINC02139-201ENST00000612023 DDIT3P35638 169 aa13.12□□□□□ -0.31
LINC02139-201ENST00000612023 SETQ01105 290 aaPredicted RBP13.12□□□□□ -0.31
LINC02139-201ENST00000612023 RABEP1Q15276 862 aa13.12□□□□□ -0.31
LINC02139-201ENST00000612023 ZNF827Q17R98 1081 aa13.12□□□□□ -0.31
LINC02139-201ENST00000612023 DNAJC10Q8IXB1 793 aa13.12□□□□□ -0.31
LINC02139-201ENST00000612023 TNS4Q8IZW8 715 aa13.12□□□□□ -0.31
LINC02139-201ENST00000612023 FLAD1Q8NFF5 587 aa13.12□□□□□ -0.31
LINC02139-201ENST00000612023 PURBQ96QR8 312 aaKnown RBP13.12□□□□□ -0.31
LINC02139-201ENST00000612023 K7ELQ4 463 aaPredicted RBP13.12□□□□□ -0.31
LINC02139-201ENST00000612023 NME8Q8N427 588 aa13.12□□□□□ -0.31
LINC02139-201ENST00000612023 SSH3Q8TE77 659 aa13.12□□□□□ -0.31
LINC02139-201ENST00000612023 MRFAP1L1Q96HT8 127 aa13.12□□□□□ -0.31
LINC02139-201ENST00000612023 SPC25Q9HBM1 224 aa13.12□□□□□ -0.31
LINC02139-201ENST00000612023 SALL3Q9BXA9 1300 aa13.11□□□□□ -0.31
LINC02139-201ENST00000612023 CYP19A1P11511 503 aaPredicted RBP13.11□□□□□ -0.31
LINC02139-201ENST00000612023 AMPD3Q01432 767 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms