RNA–Protein interactions for RNA: ENST00000611917.1

FAM228B-207, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 3

Gene FAM228B, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-207ENST00000611917 HMG20BQ9P0W2 317 aa15.3■□□□□ 0.04
FAM228B-207ENST00000611917 LRP2BPQ9P2M1 347 aa15.3■□□□□ 0.04
FAM228B-207ENST00000611917 DAGLAQ9Y4D2 1042 aa15.3■□□□□ 0.04
FAM228B-207ENST00000611917 MAP4K4O95819 1239 aaPredicted RBP15.29■□□□□ 0.04
FAM228B-207ENST00000611917 ARID4AP29374 1257 aaPredicted RBP15.29■□□□□ 0.04
FAM228B-207ENST00000611917 DIXDC1Q155Q3 683 aa15.29■□□□□ 0.04
FAM228B-207ENST00000611917 DCAF15Q66K64 600 aa15.29■□□□□ 0.04
FAM228B-207ENST00000611917 CDC42EP5Q6NZY7 148 aa15.29■□□□□ 0.04
FAM228B-207ENST00000611917 RNF186Q9NXI6 227 aa15.29■□□□□ 0.04
FAM228B-207ENST00000611917 RAI14Q9P0K7 980 aa15.29■□□□□ 0.04
FAM228B-207ENST00000611917 AOX1Q06278 1338 aa15.28■□□□□ 0.04
FAM228B-207ENST00000611917 MANSC4A6NHS7 340 aaPredicted RBP15.28■□□□□ 0.04
FAM228B-207ENST00000611917 RAB11FIP3O75154 756 aa15.28■□□□□ 0.04
FAM228B-207ENST00000611917 CACNB3P54284 484 aa15.28■□□□□ 0.04
FAM228B-207ENST00000611917 SPRYD7Q5W111 196 aa15.28■□□□□ 0.04
FAM228B-207ENST00000611917 OTUD7BQ6GQQ9 843 aa15.28■□□□□ 0.04
FAM228B-207ENST00000611917 ZNF512BQ96KM6 892 aaPredicted RBP15.28■□□□□ 0.04
FAM228B-207ENST00000611917 TEPSINQ96N21 525 aa15.28■□□□□ 0.04
FAM228B-207ENST00000611917 NOL10Q9BSC4 688 aaKnown RBP15.28■□□□□ 0.04
FAM228B-207ENST00000611917 CCDC8Q9H0W5 538 aaPredicted RBP15.28■□□□□ 0.04
FAM228B-207ENST00000611917 CSADQ9Y600 493 aa15.28■□□□□ 0.04
FAM228B-207ENST00000611917 ALDH1A1P00352 501 aa15.27■□□□□ 0.04
FAM228B-207ENST00000611917 ZBTB48P10074 688 aaPredicted RBP15.27■□□□□ 0.04
FAM228B-207ENST00000611917 MKRN3Q13064 507 aaKnown RBP15.27■□□□□ 0.04
FAM228B-207ENST00000611917 CLASRPQ8N2M8 674 aaKnown RBP15.27■□□□□ 0.04
FAM228B-207ENST00000611917 DBNDD2Q9BQY9 259 aa15.27■□□□□ 0.04
FAM228B-207ENST00000611917 EXOC6BQ9Y2D4 811 aa15.27■□□□□ 0.04
FAM228B-207ENST00000611917 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.27■□□□□ 0.04
FAM228B-207ENST00000611917 BAG3O95817 575 aa15.26■□□□□ 0.03
FAM228B-207ENST00000611917 MECOMQ03112 1051 aa15.26■□□□□ 0.03
FAM228B-207ENST00000611917 TCP10Q12799 353 aa15.26■□□□□ 0.03
FAM228B-207ENST00000611917 TBC1D9Q6ZT07 1266 aa15.26■□□□□ 0.03
FAM228B-207ENST00000611917 RHPN1Q8TCX5 695 aa15.26■□□□□ 0.03
FAM228B-207ENST00000611917 EAF2Q96CJ1 260 aaPredicted RBP15.26■□□□□ 0.03
FAM228B-207ENST00000611917 KIF1BPQ96EK5 621 aa15.26■□□□□ 0.03
FAM228B-207ENST00000611917 TSKSQ9UJT2 592 aa15.26■□□□□ 0.03
FAM228B-207ENST00000611917 FZD1Q9UP38 647 aa15.26■□□□□ 0.03
FAM228B-207ENST00000611917 GPR75-ASB3A0A0A6YYF3 556 aa15.25■□□□□ 0.03
FAM228B-207ENST00000611917 ENTPD3O75355 529 aa15.25■□□□□ 0.03
FAM228B-207ENST00000611917 MCAMP43121 646 aa15.25■□□□□ 0.03
FAM228B-207ENST00000611917 WNK4Q96J92 1243 aa15.25■□□□□ 0.03
FAM228B-207ENST00000611917 IDI2Q9BXS1 227 aa15.25■□□□□ 0.03
FAM228B-207ENST00000611917 ZNF341Q9BYN7 854 aa15.25■□□□□ 0.03
FAM228B-207ENST00000611917 SNRKQ9NRH2 765 aa15.25■□□□□ 0.03
FAM228B-207ENST00000611917 GAKO14976 1311 aa15.24■□□□□ 0.03
FAM228B-207ENST00000611917 IFIT2P09913 472 aaKnown RBP15.24■□□□□ 0.03
FAM228B-207ENST00000611917 AACSQ86V21 672 aa15.24■□□□□ 0.03
FAM228B-207ENST00000611917 ZSCAN29Q8IWY8 852 aaPredicted RBP15.24■□□□□ 0.03
FAM228B-207ENST00000611917 NSUN4Q96CB9 384 aaKnown RBP15.24■□□□□ 0.03
FAM228B-207ENST00000611917 CLMNQ96JQ2 1002 aa15.24■□□□□ 0.03
FAM228B-207ENST00000611917 YTHDC1Q96MU7 727 aaKnown RBP15.24■□□□□ 0.03
FAM228B-207ENST00000611917 PAPPA2Q9BXP8 1791 aa15.24■□□□□ 0.03
FAM228B-207ENST00000611917 MROH7-TTC4A0A0A0MT08 1334 aa15.23■□□□□ 0.03
FAM228B-207ENST00000611917 WDHD1O75717 1129 aaPredicted RBP15.23■□□□□ 0.03
FAM228B-207ENST00000611917 PLCG2P16885 1265 aa15.23■□□□□ 0.03
FAM228B-207ENST00000611917 BTDP43251 543 aa15.23■□□□□ 0.03
FAM228B-207ENST00000611917 NAA16Q6N069 864 aaPredicted RBP15.23■□□□□ 0.03
FAM228B-207ENST00000611917 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.23■□□□□ 0.03
FAM228B-207ENST00000611917 MIGA2Q7L4E1 593 aa15.23■□□□□ 0.03
FAM228B-207ENST00000611917 ELP3Q9H9T3 547 aa15.23■□□□□ 0.03
FAM228B-207ENST00000611917 A0A1B0GUL6 1792 aa15.23■□□□□ 0.03
FAM228B-207ENST00000611917 APBB1O00213 710 aa15.22■□□□□ 0.03
FAM228B-207ENST00000611917 NPM3O75607 178 aaKnown RBP15.22■□□□□ 0.03
FAM228B-207ENST00000611917 RGS3P49796 1198 aa15.22■□□□□ 0.03
FAM228B-207ENST00000611917 GTF2A2P52657 109 aa15.22■□□□□ 0.03
FAM228B-207ENST00000611917 C20orf194Q5TEA3 1177 aa15.22■□□□□ 0.03
FAM228B-207ENST00000611917 TMED8Q6PL24 325 aaPredicted RBP15.22■□□□□ 0.03
FAM228B-207ENST00000611917 PI16Q6UXB8 463 aa15.22■□□□□ 0.03
FAM228B-207ENST00000611917 ERO1BQ86YB8 467 aa15.22■□□□□ 0.03
FAM228B-207ENST00000611917 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.22■□□□□ 0.03
FAM228B-207ENST00000611917 OPTNQ96CV9 577 aa15.22■□□□□ 0.03
FAM228B-207ENST00000611917 WRNIP1Q96S55 665 aa15.22■□□□□ 0.03
FAM228B-207ENST00000611917 IL1RAPL2Q9NP60 686 aa15.22■□□□□ 0.03
FAM228B-207ENST00000611917 FAM198AQ9UFP1 575 aa15.22■□□□□ 0.03
FAM228B-207ENST00000611917 DBNLQ9UJU6 430 aaKnown RBP15.22■□□□□ 0.03
FAM228B-207ENST00000611917 CYP2E1P05181 493 aaPredicted RBP15.21■□□□□ 0.03
FAM228B-207ENST00000611917 ZAP70P43403 619 aa15.21■□□□□ 0.03
FAM228B-207ENST00000611917 NFIAQ12857 509 aa15.21■□□□□ 0.03
FAM228B-207ENST00000611917 TTF1Q15361 905 aaPredicted RBP15.21■□□□□ 0.03
FAM228B-207ENST00000611917 IFNL1Q8IU54 200 aa15.21■□□□□ 0.03
FAM228B-207ENST00000611917 SIRT2Q8IXJ6 389 aa15.21■□□□□ 0.03
FAM228B-207ENST00000611917 BCL11AQ9H165 835 aa15.21■□□□□ 0.03
FAM228B-207ENST00000611917 ZNF646O15015 1829 aaPredicted RBP15.2■□□□□ 0.02
FAM228B-207ENST00000611917 TBC1D8O95759 1140 aa15.2■□□□□ 0.02
FAM228B-207ENST00000611917 PPP4CP60510 307 aa15.2■□□□□ 0.02
FAM228B-207ENST00000611917 MAP3K12Q12852 859 aa15.2■□□□□ 0.02
FAM228B-207ENST00000611917 VGLL4Q14135 290 aa15.2■□□□□ 0.02
FAM228B-207ENST00000611917 CERS3Q8IU89 383 aa15.2■□□□□ 0.02
FAM228B-207ENST00000611917 CDAN1Q8IWY9 1227 aa15.2■□□□□ 0.02
FAM228B-207ENST00000611917 ZKSCAN4Q969J2 545 aaPredicted RBP15.2■□□□□ 0.02
FAM228B-207ENST00000611917 ZNF112Q9UJU3 913 aa15.2■□□□□ 0.02
FAM228B-207ENST00000611917 TESPA1A2RU30 521 aaPredicted RBP15.19■□□□□ 0.02
FAM228B-207ENST00000611917 PPATQ06203 517 aa15.19■□□□□ 0.02
FAM228B-207ENST00000611917 PICALMQ13492 652 aa15.19■□□□□ 0.02
FAM228B-207ENST00000611917 NOM1Q5C9Z4 860 aaKnown RBP15.19■□□□□ 0.02
FAM228B-207ENST00000611917 ZFPM1Q8IX07 1006 aa15.19■□□□□ 0.02
FAM228B-207ENST00000611917 TEX11Q8IYF3 940 aa15.19■□□□□ 0.02
FAM228B-207ENST00000611917 GPR25O00155 361 aa15.18■□□□□ 0.02
FAM228B-207ENST00000611917 IDH1O75874 414 aaKnown RBP15.18■□□□□ 0.02
FAM228B-207ENST00000611917 CETPP11597 493 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms