RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 MRIQ9BWK5 157 aa10.69□□□□□ -0.7
SNCA-212ENST00000611107 DDX4Q9NQI0 724 aaKnown RBP10.69□□□□□ -0.7
SNCA-212ENST00000611107 RNF186Q9NXI6 227 aa10.69□□□□□ -0.7
SNCA-212ENST00000611107 DENND2AQ9ULE3 1009 aa10.69□□□□□ -0.7
SNCA-212ENST00000611107 SIPA1L1O43166 1804 aa10.69□□□□□ -0.7
SNCA-212ENST00000611107 GAKO14976 1311 aa10.68□□□□□ -0.7
SNCA-212ENST00000611107 TRPA1O75762 1119 aa10.68□□□□□ -0.7
SNCA-212ENST00000611107 LDHBP07195 334 aaKnown RBP10.68□□□□□ -0.7
SNCA-212ENST00000611107 IRX6P78412 446 aaPredicted RBP10.68□□□□□ -0.7
SNCA-212ENST00000611107 TCP10Q12799 353 aa10.68□□□□□ -0.7
SNCA-212ENST00000611107 SPRYD7Q5W111 196 aa10.68□□□□□ -0.7
SNCA-212ENST00000611107 TNS4Q8IZW8 715 aa10.68□□□□□ -0.7
SNCA-212ENST00000611107 CCDC102AQ96A19 550 aa10.68□□□□□ -0.7
SNCA-212ENST00000611107 AIDAQ96BJ3 306 aa10.68□□□□□ -0.7
SNCA-212ENST00000611107 CHMP4BQ9H444 224 aaKnown RBP10.68□□□□□ -0.7
SNCA-212ENST00000611107 PIH1D3Q9NQM4 214 aaKnown RBP10.68□□□□□ -0.7
SNCA-212ENST00000611107 PRDM10Q9NQV6 1147 aa10.68□□□□□ -0.7
SNCA-212ENST00000611107 ABCF2Q9UG63 623 aa10.68□□□□□ -0.7
SNCA-212ENST00000611107 ATRNL1Q5VV63 1379 aa10.67□□□□□ -0.7
SNCA-212ENST00000611107 APBB1O00213 710 aa10.67□□□□□ -0.7
SNCA-212ENST00000611107 SEMA3EO15041 775 aa10.67□□□□□ -0.7
SNCA-212ENST00000611107 MYO1BO43795 1136 aa10.67□□□□□ -0.7
SNCA-212ENST00000611107 CYP2E1P05181 493 aaPredicted RBP10.67□□□□□ -0.7
SNCA-212ENST00000611107 ZAP70P43403 619 aa10.67□□□□□ -0.7
SNCA-212ENST00000611107 RHBDL3P58872 404 aa10.67□□□□□ -0.7
SNCA-212ENST00000611107 CAP1Q01518 475 aa10.67□□□□□ -0.7
SNCA-212ENST00000611107 MECOMQ03112 1051 aa10.67□□□□□ -0.7
SNCA-212ENST00000611107 ARMC9Q7Z3E5 817 aa10.67□□□□□ -0.7
SNCA-212ENST00000611107 ADGRA1Q86SQ6 560 aa10.67□□□□□ -0.7
SNCA-212ENST00000611107 SPATA5Q8NB90 893 aa10.67□□□□□ -0.7
SNCA-212ENST00000611107 EXOC6Q8TAG9 804 aa10.67□□□□□ -0.7
SNCA-212ENST00000611107 WNK4Q96J92 1243 aa10.67□□□□□ -0.7
SNCA-212ENST00000611107 IL1RAPL2Q9NP60 686 aa10.67□□□□□ -0.7
SNCA-212ENST00000611107 GPR108Q9NPR9 543 aa10.67□□□□□ -0.7
SNCA-212ENST00000611107 AKAP2Q9Y2D5 859 aa10.67□□□□□ -0.7
SNCA-212ENST00000611107 SUGT1Q9Y2Z0 365 aa10.67□□□□□ -0.7
SNCA-212ENST00000611107 PPP2R3BQ9Y5P8 575 aa10.67□□□□□ -0.7
SNCA-212ENST00000611107 PDS5AQ29RF7 1337 aaKnown RBP10.66□□□□□ -0.7
SNCA-212ENST00000611107 ZSWIM8A7E2V4 1837 aa10.66□□□□□ -0.7
SNCA-212ENST00000611107 PHIPQ8WWQ0 1821 aa10.66□□□□□ -0.7
SNCA-212ENST00000611107 WDHD1O75717 1129 aaPredicted RBP10.66□□□□□ -0.7
SNCA-212ENST00000611107 TBC1D8O95759 1140 aa10.66□□□□□ -0.7
SNCA-212ENST00000611107 OS9Q13438 667 aaPredicted RBP10.66□□□□□ -0.7
SNCA-212ENST00000611107 MIGA2Q7L4E1 593 aa10.66□□□□□ -0.7
SNCA-212ENST00000611107 RPAP2Q8IXW5 612 aaPredicted RBP10.66□□□□□ -0.7
SNCA-212ENST00000611107 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.66□□□□□ -0.7
SNCA-212ENST00000611107 NSUN4Q96CB9 384 aaKnown RBP10.66□□□□□ -0.7
SNCA-212ENST00000611107 PTPN18Q99952 460 aa10.66□□□□□ -0.7
SNCA-212ENST00000611107 ANTXR1Q9H6X2 564 aa10.66□□□□□ -0.7
SNCA-212ENST00000611107 ELP3Q9H9T3 547 aa10.66□□□□□ -0.7
SNCA-212ENST00000611107 USP40Q9NVE5 1235 aa10.66□□□□□ -0.7
SNCA-212ENST00000611107 GNL3LQ9NVN8 582 aaKnown RBP10.66□□□□□ -0.7
SNCA-212ENST00000611107 PCDHB15Q9Y5E8 787 aa10.66□□□□□ -0.7
SNCA-212ENST00000611107 MAST3O60307 1309 aa10.65□□□□□ -0.7
SNCA-212ENST00000611107 DDTLA6NHG4 134 aaPredicted RBP10.65□□□□□ -0.7
SNCA-212ENST00000611107 IGF2BP3O00425 579 aaKnown RBP eCLIP10.65□□□□□ -0.7
SNCA-212ENST00000611107 CAPN15O75808 1086 aa10.65□□□□□ -0.7
SNCA-212ENST00000611107 INPP5BP32019 993 aa10.65□□□□□ -0.7
SNCA-212ENST00000611107 NF2P35240 595 aa10.65□□□□□ -0.7
SNCA-212ENST00000611107 BTDP43251 543 aa10.65□□□□□ -0.7
SNCA-212ENST00000611107 VGLL4Q14135 290 aa10.65□□□□□ -0.7
SNCA-212ENST00000611107 SLFNL1Q499Z3 407 aa10.65□□□□□ -0.7
SNCA-212ENST00000611107 RHPN1Q8TCX5 695 aa10.65□□□□□ -0.7
SNCA-212ENST00000611107 ZKSCAN4Q969J2 545 aaPredicted RBP10.65□□□□□ -0.7
SNCA-212ENST00000611107 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.65□□□□□ -0.7
SNCA-212ENST00000611107 SNCAIPQ9Y6H5 919 aa10.65□□□□□ -0.7
SNCA-212ENST00000611107 MROH7-TTC4A0A0A0MT08 1334 aa10.64□□□□□ -0.71
SNCA-212ENST00000611107 FAM196BA6NMK8 535 aa10.64□□□□□ -0.71
SNCA-212ENST00000611107 SMARCA5O60264 1052 aaPredicted RBP10.64□□□□□ -0.71
SNCA-212ENST00000611107 HMMRO75330 724 aa10.64□□□□□ -0.71
SNCA-212ENST00000611107 CHGBP05060 677 aa10.64□□□□□ -0.71
SNCA-212ENST00000611107 TM4SF4P48230 202 aa10.64□□□□□ -0.71
SNCA-212ENST00000611107 RGS3P49796 1198 aa10.64□□□□□ -0.71
SNCA-212ENST00000611107 RRP1BQ14684 758 aaKnown RBP10.64□□□□□ -0.71
SNCA-212ENST00000611107 SUPT20HL1Q3ZLR7 823 aa10.64□□□□□ -0.71
SNCA-212ENST00000611107 GORABQ5T7V8 394 aa10.64□□□□□ -0.71
SNCA-212ENST00000611107 FAM83AQ86UY5 434 aa10.64□□□□□ -0.71
SNCA-212ENST00000611107 FAM151AQ8WW52 585 aa10.64□□□□□ -0.71
SNCA-212ENST00000611107 SLC10A4Q96EP9 437 aa10.64□□□□□ -0.71
SNCA-212ENST00000611107 EDC3Q96F86 508 aaKnown RBP10.64□□□□□ -0.71
SNCA-212ENST00000611107 FAM163AQ96GL9 167 aaPredicted RBP10.64□□□□□ -0.71
SNCA-212ENST00000611107 MS4A4AQ96JQ5 239 aa10.64□□□□□ -0.71
SNCA-212ENST00000611107 BCL11AQ9H165 835 aa10.64□□□□□ -0.71
SNCA-212ENST00000611107 PTPRFP10586 1907 aa10.64□□□□□ -0.71
SNCA-212ENST00000611107 GPR75-ASB3A0A0A6YYF3 556 aa10.63□□□□□ -0.71
SNCA-212ENST00000611107 PPP1R12BO60237 982 aaPredicted RBP10.63□□□□□ -0.71
SNCA-212ENST00000611107 DYNLL1P63167 89 aaKnown RBP10.63□□□□□ -0.71
SNCA-212ENST00000611107 TNFAIP1Q13829 316 aa10.63□□□□□ -0.71
SNCA-212ENST00000611107 TTC39AQ5SRH9 613 aa10.63□□□□□ -0.71
SNCA-212ENST00000611107 FKBP1CQ5VVH2 108 aa10.63□□□□□ -0.71
SNCA-212ENST00000611107 ERICH6Q7L0X2 663 aa10.63□□□□□ -0.71
SNCA-212ENST00000611107 CCDC84Q86UT8 332 aaPredicted RBP10.63□□□□□ -0.71
SNCA-212ENST00000611107 AACSQ86V21 672 aa10.63□□□□□ -0.71
SNCA-212ENST00000611107 DZIP1Q86YF9 867 aaKnown RBP10.63□□□□□ -0.71
SNCA-212ENST00000611107 SH3RF3Q8TEJ3 882 aaPredicted RBP10.63□□□□□ -0.71
SNCA-212ENST00000611107 OPTNQ96CV9 577 aa10.63□□□□□ -0.71
SNCA-212ENST00000611107 IDI2Q9BXS1 227 aa10.63□□□□□ -0.71
SNCA-212ENST00000611107 RPAP1Q9BWH6 1393 aaPredicted RBP10.63□□□□□ -0.71
SNCA-212ENST00000611107 PHF20L1A8MW92 1017 aa10.62□□□□□ -0.71
SNCA-212ENST00000611107 CENPBP07199 599 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms