RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 POLR3EQ9NVU0 708 aa23.52■■□□□ 1.36
SSBP3-216ENST00000610401 MED1Q15648 1581 aaPredicted RBP23.52■■□□□ 1.36
SSBP3-216ENST00000610401 A0A0U1RQJ8 604 aa23.52■■□□□ 1.36
SSBP3-216ENST00000610401 BTBD18B2RXH4 712 aa23.52■■□□□ 1.36
SSBP3-216ENST00000610401 MTF1Q14872 753 aa23.52■■□□□ 1.36
SSBP3-216ENST00000610401 MB21D2Q8IYB1 491 aaPredicted RBP23.52■■□□□ 1.36
SSBP3-216ENST00000610401 ATRIPQ8WXE1 791 aa23.52■■□□□ 1.36
SSBP3-216ENST00000610401 WDR24Q96S15 920 aa23.52■■□□□ 1.36
SSBP3-216ENST00000610401 AGXT2Q9BYV1 514 aa23.52■■□□□ 1.36
SSBP3-216ENST00000610401 MEGF6O75095 1541 aa23.52■■□□□ 1.35
SSBP3-216ENST00000610401 ETF1P62495 437 aaKnown RBP23.51■■□□□ 1.35
SSBP3-216ENST00000610401 TRIM29Q14134 588 aa23.51■■□□□ 1.35
SSBP3-216ENST00000610401 HSD3B7Q9H2F3 369 aa23.51■■□□□ 1.35
SSBP3-216ENST00000610401 GOLGB1Q14789 3259 aaKnown RBP23.51■■□□□ 1.35
SSBP3-216ENST00000610401 A0A1W2PQ27 194 aa23.5■■□□□ 1.35
SSBP3-216ENST00000610401 A0A1W2PQ64 194 aa23.5■■□□□ 1.35
SSBP3-216ENST00000610401 A0A1W2PQD8 194 aa23.5■■□□□ 1.35
SSBP3-216ENST00000610401 MCAMP43121 646 aa23.5■■□□□ 1.35
SSBP3-216ENST00000610401 MYL5Q02045 173 aa23.5■■□□□ 1.35
SSBP3-216ENST00000610401 MARF1Q9Y4F3 1742 aaKnown RBP23.5■■□□□ 1.35
SSBP3-216ENST00000610401 PRR29P0C7W0 189 aa23.5■■□□□ 1.35
SSBP3-216ENST00000610401 TOGARAM2Q6ZUX3 1019 aa23.5■■□□□ 1.35
SSBP3-216ENST00000610401 USP49Q70CQ1 688 aa23.5■■□□□ 1.35
SSBP3-216ENST00000610401 GOLGA8AA7E2F4 631 aa23.5■■□□□ 1.35
SSBP3-216ENST00000610401 POLR2DO15514 142 aaKnown RBP23.5■■□□□ 1.35
SSBP3-216ENST00000610401 YEATS4O95619 227 aa23.5■■□□□ 1.35
SSBP3-216ENST00000610401 CMA1P23946 247 aa23.5■■□□□ 1.35
SSBP3-216ENST00000610401 AFMP43652 599 aa23.5■■□□□ 1.35
SSBP3-216ENST00000610401 EVCP57679 992 aa23.5■■□□□ 1.35
SSBP3-216ENST00000610401 IFIT5Q13325 482 aaKnown RBP23.5■■□□□ 1.35
SSBP3-216ENST00000610401 SYCP1Q15431 976 aa23.5■■□□□ 1.35
SSBP3-216ENST00000610401 TMCO3Q6UWJ1 677 aa23.5■■□□□ 1.35
SSBP3-216ENST00000610401 IARSP41252 1262 aaKnown RBP23.49■■□□□ 1.35
SSBP3-216ENST00000610401 NR5A1Q13285 461 aa23.49■■□□□ 1.35
SSBP3-216ENST00000610401 TMEM67Q5HYA8 995 aa23.49■■□□□ 1.35
SSBP3-216ENST00000610401 METTL16Q86W50 562 aaKnown RBP23.49■■□□□ 1.35
SSBP3-216ENST00000610401 KCNH3Q9ULD8 1083 aa23.49■■□□□ 1.35
SSBP3-216ENST00000610401 SLC39A14Q15043 492 aa23.49■■□□□ 1.35
SSBP3-216ENST00000610401 SMYD4Q8IYR2 804 aaPredicted RBP23.49■■□□□ 1.35
SSBP3-216ENST00000610401 PNMA6AP0CW24 399 aaPredicted RBP23.48■■□□□ 1.35
SSBP3-216ENST00000610401 NCAPD2Q15021 1401 aa23.48■■□□□ 1.35
SSBP3-216ENST00000610401 WWC3Q9ULE0 1092 aa23.48■■□□□ 1.35
SSBP3-216ENST00000610401 BMP6P22004 513 aa23.48■■□□□ 1.35
SSBP3-216ENST00000610401 SAMSN1Q9NSI8 373 aaKnown RBP23.48■■□□□ 1.35
SSBP3-216ENST00000610401 IMPACTQ9P2X3 320 aa23.48■■□□□ 1.35
SSBP3-216ENST00000610401 PUF60Q9UHX1 559 aaKnown RBP23.48■■□□□ 1.35
SSBP3-216ENST00000610401 IFIT3O14879 490 aaKnown RBP23.48■■□□□ 1.35
SSBP3-216ENST00000610401 GABPB1Q06547 395 aaPredicted RBP23.48■■□□□ 1.35
SSBP3-216ENST00000610401 SKIDA1Q1XH10 827 aa23.48■■□□□ 1.35
SSBP3-216ENST00000610401 APPBP2Q92624 585 aa23.48■■□□□ 1.35
SSBP3-216ENST00000610401 NBPF3Q9H094 633 aa23.48■■□□□ 1.35
SSBP3-216ENST00000610401 ANGEL1Q9UNK9 670 aaKnown RBP23.48■■□□□ 1.35
SSBP3-216ENST00000610401 FHOD1Q9Y613 1164 aa23.48■■□□□ 1.35
SSBP3-216ENST00000610401 FMR1Q06787 632 aaKnown RBP eCLIP23.47■■□□□ 1.359e-6■□□□□ 9.4
SSBP3-216ENST00000610401 GREM2Q9H772 168 aa23.47■■□□□ 1.35
SSBP3-216ENST00000610401 NFE2L3Q9Y4A8 694 aa23.47■■□□□ 1.35
SSBP3-216ENST00000610401 SLIT1O75093 1534 aa23.47■■□□□ 1.35
SSBP3-216ENST00000610401 SMIM22K7EJ46 135 aa23.47■■□□□ 1.35
SSBP3-216ENST00000610401 ZBTB43O43298 467 aa23.47■■□□□ 1.35
SSBP3-216ENST00000610401 BMS1Q14692 1282 aaKnown RBP23.47■■□□□ 1.35
SSBP3-216ENST00000610401 CCDC102BQ68D86 513 aa23.47■■□□□ 1.35
SSBP3-216ENST00000610401 BRAPQ7Z569 592 aa23.47■■□□□ 1.35
SSBP3-216ENST00000610401 PIH1D3Q9NQM4 214 aaKnown RBP23.47■■□□□ 1.35
SSBP3-216ENST00000610401 MIGA1Q8NAN2 632 aa23.46■■□□□ 1.35
SSBP3-216ENST00000610401 ZNF532Q9HCE3 1301 aa23.46■■□□□ 1.35
SSBP3-216ENST00000610401 PRKAB2O43741 272 aa23.46■■□□□ 1.35
SSBP3-216ENST00000610401 RANBP6O60518 1105 aaKnown RBP23.46■■□□□ 1.35
SSBP3-216ENST00000610401 APOA5Q6Q788 366 aa23.46■■□□□ 1.35
SSBP3-216ENST00000610401 SERTAD1Q9UHV2 236 aa23.46■■□□□ 1.35
SSBP3-216ENST00000610401 PHKA1P46020 1223 aa23.46■■□□□ 1.35
SSBP3-216ENST00000610401 ATL3Q6DD88 541 aa23.46■■□□□ 1.35
SSBP3-216ENST00000610401 AIDAQ96BJ3 306 aa23.46■■□□□ 1.35
SSBP3-216ENST00000610401 RNF216Q9NWF9 866 aaPredicted RBP23.46■■□□□ 1.35
SSBP3-216ENST00000610401 SLC4A8Q2Y0W8 1093 aa23.45■■□□□ 1.34
SSBP3-216ENST00000610401 INTS13Q9NVM9 706 aa23.45■■□□□ 1.34
SSBP3-216ENST00000610401 PPP2R2CQ9Y2T4 447 aa23.45■■□□□ 1.34
SSBP3-216ENST00000610401 ST5P78524 1137 aa23.45■■□□□ 1.34
SSBP3-216ENST00000610401 SRCAPQ6ZRS2 3230 aa23.45■■□□□ 1.34
SSBP3-216ENST00000610401 PLA2G4AP47712 749 aa23.44■■□□□ 1.34
SSBP3-216ENST00000610401 BAG1Q99933 345 aaPredicted RBP23.44■■□□□ 1.34
SSBP3-216ENST00000610401 ARMT1Q9H993 441 aa23.44■■□□□ 1.34
SSBP3-216ENST00000610401 ARHGAP23Q9P227 1491 aa23.44■■□□□ 1.34
SSBP3-216ENST00000610401 CASQ1P31415 396 aa23.44■■□□□ 1.34
SSBP3-216ENST00000610401 TRIM65Q6PJ69 517 aa23.44■■□□□ 1.34
SSBP3-216ENST00000610401 CPLX2Q6PUV4 134 aaKnown RBP23.44■■□□□ 1.34
SSBP3-216ENST00000610401 FAM205CA6NFA0 338 aa23.44■■□□□ 1.34
SSBP3-216ENST00000610401 ATF3P18847 181 aa23.44■■□□□ 1.34
SSBP3-216ENST00000610401 ITGA6P23229 1130 aa23.44■■□□□ 1.34
SSBP3-216ENST00000610401 CCDC12Q8WUD4 166 aaPredicted RBP23.44■■□□□ 1.34
SSBP3-216ENST00000610401 SLC12A7Q9Y666 1083 aa23.44■■□□□ 1.34
SSBP3-216ENST00000610401 SEC31BQ9NQW1 1179 aa23.43■■□□□ 1.34
SSBP3-216ENST00000610401 N4BP2Q86UW6 1770 aaPredicted RBP23.43■■□□□ 1.34
SSBP3-216ENST00000610401 HLFQ16534 295 aa23.43■■□□□ 1.34
SSBP3-216ENST00000610401 REXO1L1PQ8IX06 675 aa23.43■■□□□ 1.34
SSBP3-216ENST00000610401 PSDA5PKW4 1024 aaPredicted RBP23.42■■□□□ 1.34
SSBP3-216ENST00000610401 SOWAHDA6NJG2 315 aa23.42■■□□□ 1.34
SSBP3-216ENST00000610401 KIF2AO00139 706 aaPredicted RBP23.42■■□□□ 1.34
SSBP3-216ENST00000610401 WWC2Q6AWC2 1192 aa23.42■■□□□ 1.34
SSBP3-216ENST00000610401 CCDC191Q8NCU4 936 aa23.42■■□□□ 1.34
SSBP3-216ENST00000610401 OXER1Q8TDS5 423 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms