RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 LINC00854A0A1B0GVQ3 168 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 PFDN1O60925 122 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 B3GALNT1O75752 331 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 SLU7O95391 586 aaKnown RBP5.38□□□□□ -1.55
HDDC2-208ENST00000609021 CCDC159P0C7I6 412 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 RRM1P23921 792 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 GPTP24298 496 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 PAPOLAP51003 745 aaKnown RBP5.38□□□□□ -1.55
HDDC2-208ENST00000609021 WASHC5Q12768 1159 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 CCDC57Q2TAC2 916 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 CEP85LQ5SZL2 805 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 THEMIS2Q5TEJ8 643 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 RCSD1Q6JBY9 416 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 HDAC7Q8WUI4 952 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 TSC22D3Q99576 134 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 EPAS1Q99814 870 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 PARD6BQ9BYG5 372 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 IRX2Q9BZI1 471 aaPredicted RBP5.38□□□□□ -1.55
HDDC2-208ENST00000609021 YIPF3Q9GZM5 350 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 RPAP3Q9H6T3 665 aaPredicted RBP5.38□□□□□ -1.55
HDDC2-208ENST00000609021 NLRP2Q9NX02 1062 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 SEPT10Q9P0V9 454 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 ZMAT5Q9UDW3 170 aaKnown RBP5.38□□□□□ -1.55
HDDC2-208ENST00000609021 ADAM21Q9UKJ8 722 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 ASXL1Q8IXJ9 1541 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 GNAT2P19087 354 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 ATP2B2Q01814 1243 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 GUCY1B3Q02153 619 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 NAA30Q147X3 362 aaPredicted RBP5.37□□□□□ -1.55
HDDC2-208ENST00000609021 WHAMMP3Q1A5X7 153 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 C20orf194Q5TEA3 1177 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 DCLK2Q8N568 766 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 HPS3Q969F9 1004 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 CRBNQ96SW2 442 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 RABEP2Q9H5N1 569 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.37□□□□□ -1.55
HDDC2-208ENST00000609021 SYCE3A1L190 88 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 SMIM24O75264 130 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 MTRF1O75570 445 aaKnown RBP5.37□□□□□ -1.55
HDDC2-208ENST00000609021 SLC8A3P57103 927 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 MSL1Q68DK7 614 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 CCSAPQ6IQ19 270 aaPredicted RBP5.37□□□□□ -1.55
HDDC2-208ENST00000609021 CCDC50Q8IVM0 306 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 CCAR1Q8IX12 1150 aaKnown RBP5.37□□□□□ -1.55
HDDC2-208ENST00000609021 NFATC2IPQ8NCF5 419 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 SPATA17Q96L03 361 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 ALS2CR12Q96Q35 445 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 CCDC68Q9H2F9 335 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 SYNCQ9H7C4 482 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 DNAAF2Q9NVR5 837 aaKnown RBP5.37□□□□□ -1.55
HDDC2-208ENST00000609021 SSX2IPQ9Y2D8 614 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 CARD8Q9Y2G2 431 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 NEXMIFQ5QGS0 1516 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 NPC1L1Q9UHC9 1359 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 M0R2C6 588 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 EIF3FO00303 357 aaPredicted RBP5.37□□□□□ -1.55
HDDC2-208ENST00000609021 AHCYL1O43865 530 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 PRPF40AO75400 957 aaKnown RBP5.37□□□□□ -1.55
HDDC2-208ENST00000609021 MCM3P25205 808 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 SEPT2Q15019 361 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 COBLL1Q53SF7 1204 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 FBXW10Q5XX13 1052 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 SAMD14Q8IZD0 417 aaPredicted RBP5.37□□□□□ -1.55
HDDC2-208ENST00000609021 NDUFAF2Q8N183 169 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 CEP112Q8N8E3 955 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 ERMNQ8TAM6 284 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 SMARCC2Q8TAQ2 1214 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 KIAA1524Q8TCG1 905 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 CUL5Q93034 780 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 CDK5RAP3Q96JB5 506 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 TRPV5Q9NQA5 729 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 PAPOLBQ9NRJ5 636 aaKnown RBP5.37□□□□□ -1.55
HDDC2-208ENST00000609021 AATFQ9NY61 560 aaKnown RBP eCLIP5.37□□□□□ -1.55
HDDC2-208ENST00000609021 UGGT1Q9NYU2 1555 aa5.37□□□□□ -1.55
HDDC2-208ENST00000609021 RIMS1Q86UR5 1692 aaKnown RBP5.37□□□□□ -1.55
HDDC2-208ENST00000609021 hCG_2014768A0A024R1R8 64 aa5.36□□□□□ -1.55
HDDC2-208ENST00000609021 ADCY5O95622 1261 aa5.36□□□□□ -1.55
HDDC2-208ENST00000609021 HSPA1AP0DMV8 641 aaKnown RBP5.36□□□□□ -1.55
HDDC2-208ENST00000609021 HSPA1BP0DMV9 641 aaKnown RBP5.36□□□□□ -1.55
HDDC2-208ENST00000609021 TROVE2P10155 538 aaKnown RBP eCLIP5.36□□□□□ -1.55
HDDC2-208ENST00000609021 POLR2FP61218 127 aaKnown RBP5.36□□□□□ -1.55
HDDC2-208ENST00000609021 MKRN3Q13064 507 aaKnown RBP5.36□□□□□ -1.55
HDDC2-208ENST00000609021 NYAP1Q6ZVC0 841 aa5.36□□□□□ -1.55
HDDC2-208ENST00000609021 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.36□□□□□ -1.55
HDDC2-208ENST00000609021 TBC1D31Q96DN5 1066 aa5.36□□□□□ -1.55
HDDC2-208ENST00000609021 PRKRIP1Q9H875 184 aaPredicted RBP5.36□□□□□ -1.55
HDDC2-208ENST00000609021 DKK3Q9UBP4 350 aa5.36□□□□□ -1.55
HDDC2-208ENST00000609021 ZNF215Q9UL58 517 aaPredicted RBP5.36□□□□□ -1.55
HDDC2-208ENST00000609021 ADGRB1O14514 1584 aa5.36□□□□□ -1.55
HDDC2-208ENST00000609021 BOLA2-SMG1P6H3BVE0 249 aa5.36□□□□□ -1.55
HDDC2-208ENST00000609021 P4HA2O15460 535 aa5.36□□□□□ -1.55
HDDC2-208ENST00000609021 CASTP20810 708 aaKnown RBP5.36□□□□□ -1.55
HDDC2-208ENST00000609021 ROR2Q01974 943 aaKnown RBP5.36□□□□□ -1.55
HDDC2-208ENST00000609021 MAP7Q14244 749 aa5.36□□□□□ -1.55
HDDC2-208ENST00000609021 DDB1Q16531 1140 aa5.36□□□□□ -1.55
HDDC2-208ENST00000609021 CCDC170Q8IYT3 715 aa5.36□□□□□ -1.55
HDDC2-208ENST00000609021 ATP6V0A1Q93050 837 aa5.36□□□□□ -1.55
HDDC2-208ENST00000609021 PPP1R14BQ96C90 147 aa5.36□□□□□ -1.55
HDDC2-208ENST00000609021 DHTKD1Q96HY7 919 aaPredicted RBP5.36□□□□□ -1.55
HDDC2-208ENST00000609021 RBM41Q96IZ5 413 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms