RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 IGKV5-2P06315 115 aa11.94□□□□□ -0.5
CTCFL-220ENST00000608858 IL1R1P14778 569 aa11.94□□□□□ -0.5
CTCFL-220ENST00000608858 UBE3BQ7Z3V4 1068 aa11.94□□□□□ -0.5
CTCFL-220ENST00000608858 ANKRD23Q86SG2 305 aa11.94□□□□□ -0.5
CTCFL-220ENST00000608858 CDX2Q99626 313 aaPredicted RBP11.94□□□□□ -0.5
CTCFL-220ENST00000608858 CRISPLD2Q9H0B8 497 aa11.94□□□□□ -0.5
CTCFL-220ENST00000608858 ECM29Q5VYK3 1845 aa11.93□□□□□ -0.5
CTCFL-220ENST00000608858 CRKP46108 304 aa11.93□□□□□ -0.5
CTCFL-220ENST00000608858 TRIM32Q13049 653 aa11.93□□□□□ -0.5
CTCFL-220ENST00000608858 MFSD14BQ5SR56 506 aa11.93□□□□□ -0.5
CTCFL-220ENST00000608858 ZNF804AQ7Z570 1209 aa11.93□□□□□ -0.5
CTCFL-220ENST00000608858 MAFAQ8NHW3 353 aaPredicted RBP11.93□□□□□ -0.5
CTCFL-220ENST00000608858 NBPF3Q9H094 633 aa11.93□□□□□ -0.5
CTCFL-220ENST00000608858 PAK6Q9NQU5 681 aaPredicted RBP11.93□□□□□ -0.5
CTCFL-220ENST00000608858 ADGRA2Q96PE1 1338 aa11.92□□□□□ -0.5
CTCFL-220ENST00000608858 PI4KAP2A4QPH2 592 aa11.92□□□□□ -0.5
CTCFL-220ENST00000608858 TNPO2O14787 897 aaKnown RBP11.92□□□□□ -0.5
CTCFL-220ENST00000608858 BCRP11274 1271 aa11.92□□□□□ -0.5
CTCFL-220ENST00000608858 PPATQ06203 517 aa11.92□□□□□ -0.5
CTCFL-220ENST00000608858 LMOD3Q0VAK6 560 aa11.92□□□□□ -0.5
CTCFL-220ENST00000608858 MOGSQ13724 837 aa11.92□□□□□ -0.5
CTCFL-220ENST00000608858 GPAT2Q6NUI2 795 aa11.92□□□□□ -0.5
CTCFL-220ENST00000608858 PI4KAP1Q8N8J0 262 aa11.92□□□□□ -0.5
CTCFL-220ENST00000608858 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.92□□□□□ -0.5
CTCFL-220ENST00000608858 C11orf49Q9H6J7 331 aa11.92□□□□□ -0.5
CTCFL-220ENST00000608858 SERPINA10Q9UK55 444 aa11.92□□□□□ -0.5
CTCFL-220ENST00000608858 IQSEC3Q9UPP2 1182 aaPredicted RBP11.92□□□□□ -0.5
CTCFL-220ENST00000608858 TRIM35Q9UPQ4 493 aa11.92□□□□□ -0.5
CTCFL-220ENST00000608858 PRUNE2Q8WUY3 3088 aa11.91□□□□□ -0.5
CTCFL-220ENST00000608858 GYG1P46976 350 aa11.91□□□□□ -0.5
CTCFL-220ENST00000608858 FKBP1AP62942 108 aaKnown RBP11.91□□□□□ -0.5
CTCFL-220ENST00000608858 MYLIPQ8WY64 445 aa11.91□□□□□ -0.5
CTCFL-220ENST00000608858 MBIPQ9NS73 344 aa11.91□□□□□ -0.5
CTCFL-220ENST00000608858 LAMA2P24043 3122 aaKnown RBP11.9□□□□□ -0.5
CTCFL-220ENST00000608858 H7C1W4 665 aa11.9□□□□□ -0.5
CTCFL-220ENST00000608858 DDX58O95786 925 aaKnown RBP11.9□□□□□ -0.5
CTCFL-220ENST00000608858 HOXB7P09629 217 aa11.9□□□□□ -0.5
CTCFL-220ENST00000608858 PXYLP1Q8TE99 480 aa11.9□□□□□ -0.5
CTCFL-220ENST00000608858 FAM122AQ96E09 287 aa11.9□□□□□ -0.5
CTCFL-220ENST00000608858 ZNF594Q96JF6 807 aaPredicted RBP11.9□□□□□ -0.5
CTCFL-220ENST00000608858 SEMA6BQ9H3T3 888 aa11.9□□□□□ -0.5
CTCFL-220ENST00000608858 CHMP3Q9Y3E7 222 aa11.9□□□□□ -0.5
CTCFL-220ENST00000608858 MGAMO43451 1857 aa11.89□□□□□ -0.51
CTCFL-220ENST00000608858 TMEM265A0A087WTH1 108 aa11.89□□□□□ -0.51
CTCFL-220ENST00000608858 ANKRD18BA2A2Z9 1011 aa11.89□□□□□ -0.51
CTCFL-220ENST00000608858 CHAF1AQ13111 956 aaPredicted RBP11.89□□□□□ -0.51
CTCFL-220ENST00000608858 ZNF697Q5TEC3 545 aa11.89□□□□□ -0.51
CTCFL-220ENST00000608858 FAM109BQ6ICB4 259 aaPredicted RBP11.89□□□□□ -0.51
CTCFL-220ENST00000608858 KSR2Q6VAB6 950 aa11.89□□□□□ -0.51
CTCFL-220ENST00000608858 GADL1Q6ZQY3 521 aa11.89□□□□□ -0.51
CTCFL-220ENST00000608858 PARK7Q99497 189 aaKnown RBP11.89□□□□□ -0.51
CTCFL-220ENST00000608858 ZNF341Q9BYN7 854 aa11.89□□□□□ -0.51
CTCFL-220ENST00000608858 DOCK3Q8IZD9 2030 aa11.88□□□□□ -0.51
CTCFL-220ENST00000608858 NEURL1BA8MQ27 555 aa11.88□□□□□ -0.51
CTCFL-220ENST00000608858 CSF1RP07333 972 aa11.88□□□□□ -0.51
CTCFL-220ENST00000608858 TCP10Q12799 353 aa11.88□□□□□ -0.51
CTCFL-220ENST00000608858 C15orf52Q6ZUT6 534 aaKnown RBP11.88□□□□□ -0.51
CTCFL-220ENST00000608858 ANKRD13CQ8N6S4 541 aa11.88□□□□□ -0.51
CTCFL-220ENST00000608858 C8orf58Q8NAV2 365 aa11.88□□□□□ -0.51
CTCFL-220ENST00000608858 CCER1Q8TC90 406 aaPredicted RBP11.88□□□□□ -0.51
CTCFL-220ENST00000608858 SYMPKQ92797 1274 aaKnown RBP11.88□□□□□ -0.51
CTCFL-220ENST00000608858 HMX1Q9NP08 348 aaPredicted RBP11.88□□□□□ -0.51
CTCFL-220ENST00000608858 KCNH4Q9UQ05 1017 aa11.88□□□□□ -0.51
CTCFL-220ENST00000608858 FAM205AQ6ZU69 1335 aa11.87□□□□□ -0.51
CTCFL-220ENST00000608858 CLSPNQ9HAW4 1339 aa11.87□□□□□ -0.51
CTCFL-220ENST00000608858 TNFRSF10AO00220 468 aa11.87□□□□□ -0.51
CTCFL-220ENST00000608858 PLA2G5P39877 138 aa11.87□□□□□ -0.51
CTCFL-220ENST00000608858 NEXNQ0ZGT2 675 aa11.87□□□□□ -0.51
CTCFL-220ENST00000608858 IRF5Q13568 498 aa11.87□□□□□ -0.51
CTCFL-220ENST00000608858 LRRC26Q2I0M4 334 aa11.87□□□□□ -0.51
CTCFL-220ENST00000608858 DCAF15Q66K64 600 aa11.87□□□□□ -0.51
CTCFL-220ENST00000608858 ANKLE1Q8NAG6 615 aa11.87□□□□□ -0.51
CTCFL-220ENST00000608858 TDRD7Q8NHU6 1098 aaKnown RBP11.87□□□□□ -0.51
CTCFL-220ENST00000608858 COA7Q96BR5 231 aa11.87□□□□□ -0.51
CTCFL-220ENST00000608858 ZHX2Q9Y6X8 837 aa11.87□□□□□ -0.51
CTCFL-220ENST00000608858 TTC28Q96AY4 2481 aa11.86□□□□□ -0.51
CTCFL-220ENST00000608858 HIBADHP31937 336 aaKnown RBP11.86□□□□□ -0.51
CTCFL-220ENST00000608858 G2E3Q7L622 706 aa11.86□□□□□ -0.51
CTCFL-220ENST00000608858 FAM84BQ96KN1 310 aaPredicted RBP11.86□□□□□ -0.51
CTCFL-220ENST00000608858 TMOD2Q9NZR1 351 aa11.86□□□□□ -0.51
CTCFL-220ENST00000608858 PFASO15067 1338 aa11.86□□□□□ -0.51
CTCFL-220ENST00000608858 IFIT5Q13325 482 aaKnown RBP11.85□□□□□ -0.51
CTCFL-220ENST00000608858 SMCR8Q8TEV9 937 aaPredicted RBP11.85□□□□□ -0.51
CTCFL-220ENST00000608858 PPM1EQ8WY54 764 aa11.85□□□□□ -0.51
CTCFL-220ENST00000608858 LBHD1Q9BQE6 289 aaPredicted RBP11.85□□□□□ -0.51
CTCFL-220ENST00000608858 CNNM1Q9NRU3 951 aa11.85□□□□□ -0.51
CTCFL-220ENST00000608858 MYH3P11055 1940 aa11.85□□□□□ -0.51
CTCFL-220ENST00000608858 CXCL11O14625 94 aa11.84□□□□□ -0.51
CTCFL-220ENST00000608858 FRAT2O75474 233 aaPredicted RBP11.84□□□□□ -0.51
CTCFL-220ENST00000608858 SLURP2P0DP57 97 aa11.84□□□□□ -0.51
CTCFL-220ENST00000608858 FOSL2P15408 326 aa11.84□□□□□ -0.51
CTCFL-220ENST00000608858 CAPN2P17655 700 aa11.84□□□□□ -0.51
CTCFL-220ENST00000608858 GCKRQ14397 625 aa11.84□□□□□ -0.51
CTCFL-220ENST00000608858 SHHQ15465 462 aa11.84□□□□□ -0.51
CTCFL-220ENST00000608858 APOBEC3HQ6NTF7 200 aaKnown RBP11.84□□□□□ -0.51
CTCFL-220ENST00000608858 LDHAL6AQ6ZMR3 332 aa11.84□□□□□ -0.51
CTCFL-220ENST00000608858 TSPYL6Q8N831 410 aa11.84□□□□□ -0.51
CTCFL-220ENST00000608858 TEKT1Q969V4 418 aa11.84□□□□□ -0.51
CTCFL-220ENST00000608858 HOOK2Q96ED9 719 aa11.84□□□□□ -0.51
CTCFL-220ENST00000608858 TTYH1Q9H313 450 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms