RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 ADCY9O60503 1353 aa13.61□□□□□ -0.23
CTCFL-217ENST00000608425 SIPA1L3O60292 1781 aaPredicted RBP13.6□□□□□ -0.23
CTCFL-217ENST00000608425 PPP1R12BO60237 982 aaPredicted RBP13.6□□□□□ -0.23
CTCFL-217ENST00000608425 PRPF6O94906 941 aaKnown RBP13.6□□□□□ -0.23
CTCFL-217ENST00000608425 PDHBP11177 359 aa13.6□□□□□ -0.23
CTCFL-217ENST00000608425 E2F5Q15329 346 aa13.6□□□□□ -0.23
CTCFL-217ENST00000608425 LARP1Q6PKG0 1096 aaKnown RBP13.6□□□□□ -0.23
CTCFL-217ENST00000608425 BCAS4Q8TDM0 211 aa13.6□□□□□ -0.23
CTCFL-217ENST00000608425 TCEANC2Q96MN5 208 aa13.6□□□□□ -0.23
CTCFL-217ENST00000608425 FAM107BQ9H098 131 aa13.6□□□□□ -0.23
CTCFL-217ENST00000608425 NUCKS1Q9H1E3 243 aaKnown RBP13.6□□□□□ -0.23
CTCFL-217ENST00000608425 OSBPL3Q9H4L5 887 aa13.6□□□□□ -0.23
CTCFL-217ENST00000608425 SPG7Q9UQ90 795 aa13.6□□□□□ -0.23
CTCFL-217ENST00000608425 PPP2R2CQ9Y2T4 447 aa13.6□□□□□ -0.23
CTCFL-217ENST00000608425 A0A0U1RQJ8 604 aa13.6□□□□□ -0.23
CTCFL-217ENST00000608425 ZNF202O95125 648 aa13.6□□□□□ -0.23
CTCFL-217ENST00000608425 IPO7O95373 1038 aaKnown RBP13.6□□□□□ -0.23
CTCFL-217ENST00000608425 HOXB7P09629 217 aa13.6□□□□□ -0.23
CTCFL-217ENST00000608425 IRAK1P51617 712 aa13.6□□□□□ -0.23
CTCFL-217ENST00000608425 USHBP1Q8N6Y0 703 aa13.6□□□□□ -0.23
CTCFL-217ENST00000608425 ARMC2Q8NEN0 867 aa13.6□□□□□ -0.23
CTCFL-217ENST00000608425 HNRNPLLQ8WVV9 542 aaKnown RBP13.6□□□□□ -0.23
CTCFL-217ENST00000608425 ATRIPQ8WXE1 791 aa13.6□□□□□ -0.23
CTCFL-217ENST00000608425 MPHOSPH8Q99549 860 aa13.6□□□□□ -0.23
CTCFL-217ENST00000608425 CRYBG1Q9Y4K1 1723 aa13.6□□□□□ -0.23
CTCFL-217ENST00000608425 ATP1A3P13637 1013 aa13.6□□□□□ -0.23
CTCFL-217ENST00000608425 AMOTQ4VCS5 1084 aa13.6□□□□□ -0.23
CTCFL-217ENST00000608425 G2E3Q7L622 706 aa13.6□□□□□ -0.23
CTCFL-217ENST00000608425 CCDC12Q8WUD4 166 aaPredicted RBP13.6□□□□□ -0.23
CTCFL-217ENST00000608425 DPF2Q92785 391 aa13.6□□□□□ -0.23
CTCFL-217ENST00000608425 DESI2Q9BSY9 194 aa13.6□□□□□ -0.23
CTCFL-217ENST00000608425 SCAND2PQ9GZW5 306 aaPredicted RBP13.6□□□□□ -0.23
CTCFL-217ENST00000608425 G3BP2Q9UN86 482 aaKnown RBP13.6□□□□□ -0.23
CTCFL-217ENST00000608425 RGPD5Q99666 1765 aa13.6□□□□□ -0.23
CTCFL-217ENST00000608425 TUBB4AP04350 444 aa13.59□□□□□ -0.23
CTCFL-217ENST00000608425 SSBP05455 408 aaKnown RBP eCLIP13.59□□□□□ -0.23
CTCFL-217ENST00000608425 FLIIQ13045 1269 aa13.59□□□□□ -0.23
CTCFL-217ENST00000608425 ACBD3Q9H3P7 528 aa13.59□□□□□ -0.23
CTCFL-217ENST00000608425 EIF2S2P20042 333 aaKnown RBP13.59□□□□□ -0.23
CTCFL-217ENST00000608425 LMOD1P29536 600 aaPredicted RBP13.59□□□□□ -0.23
CTCFL-217ENST00000608425 AKAP4Q5JQC9 854 aa13.59□□□□□ -0.23
CTCFL-217ENST00000608425 TOGARAM2Q6ZUX3 1019 aa13.59□□□□□ -0.23
CTCFL-217ENST00000608425 XAGE2Q96GT9 111 aa13.59□□□□□ -0.23
CTCFL-217ENST00000608425 POLD4Q9HCU8 107 aa13.59□□□□□ -0.23
CTCFL-217ENST00000608425 SPATS2LQ9NUQ6 558 aaKnown RBP13.59□□□□□ -0.23
CTCFL-217ENST00000608425 BIN1O00499 593 aa13.58□□□□□ -0.24
CTCFL-217ENST00000608425 HMMRO75330 724 aa13.58□□□□□ -0.24
CTCFL-217ENST00000608425 CLSTN1O94985 981 aa13.58□□□□□ -0.24
CTCFL-217ENST00000608425 USP5P45974 858 aa13.58□□□□□ -0.24
CTCFL-217ENST00000608425 MRPL12P52815 198 aaKnown RBP13.58□□□□□ -0.24
CTCFL-217ENST00000608425 DPCR1Q3MIW9 517 aa13.58□□□□□ -0.24
CTCFL-217ENST00000608425 POTEDQ86YR6 584 aa13.58□□□□□ -0.24
CTCFL-217ENST00000608425 ANKRD18AQ8IVF6 992 aa13.58□□□□□ -0.24
CTCFL-217ENST00000608425 SMARCC1Q92922 1105 aaPredicted RBP13.58□□□□□ -0.24
CTCFL-217ENST00000608425 SH3GL3Q99963 347 aa13.58□□□□□ -0.24
CTCFL-217ENST00000608425 NBPF3Q9H094 633 aa13.58□□□□□ -0.24
CTCFL-217ENST00000608425 RAB21Q9UL25 225 aa13.58□□□□□ -0.24
CTCFL-217ENST00000608425 CDHR2Q9BYE9 1310 aa13.58□□□□□ -0.24
CTCFL-217ENST00000608425 CUTAO60888 179 aa13.58□□□□□ -0.24
CTCFL-217ENST00000608425 CAVIN2O95810 425 aa13.58□□□□□ -0.24
CTCFL-217ENST00000608425 TBC1D25Q3MII6 688 aa13.58□□□□□ -0.24
CTCFL-217ENST00000608425 KRT28Q7Z3Y7 464 aa13.58□□□□□ -0.24
CTCFL-217ENST00000608425 IL17RAQ96F46 866 aa13.58□□□□□ -0.24
CTCFL-217ENST00000608425 CTAGE5O15320 804 aa13.57□□□□□ -0.24
CTCFL-217ENST00000608425 KINO60870 393 aaKnown RBP13.57□□□□□ -0.24
CTCFL-217ENST00000608425 PYGLP06737 847 aa13.57□□□□□ -0.24
CTCFL-217ENST00000608425 CDC25CP30307 473 aa13.57□□□□□ -0.24
CTCFL-217ENST00000608425 KCNJ6P48051 423 aa13.57□□□□□ -0.24
CTCFL-217ENST00000608425 WLSQ5T9L3 541 aa13.57□□□□□ -0.24
CTCFL-217ENST00000608425 CEP57L1Q8IYX8 460 aa13.57□□□□□ -0.24
CTCFL-217ENST00000608425 TACO1Q9BSH4 297 aaKnown RBP13.57□□□□□ -0.24
CTCFL-217ENST00000608425 TPCN1Q9ULQ1 816 aa13.57□□□□□ -0.24
CTCFL-217ENST00000608425 A1BGP04217 495 aa13.57□□□□□ -0.24
CTCFL-217ENST00000608425 KCNB1Q14721 858 aa13.57□□□□□ -0.24
CTCFL-217ENST00000608425 SRGAP1Q7Z6B7 1085 aa13.57□□□□□ -0.24
CTCFL-217ENST00000608425 CCAR1Q8IX12 1150 aaKnown RBP13.57□□□□□ -0.24
CTCFL-217ENST00000608425 JAKMIP1Q96N16 626 aaKnown RBP13.57□□□□□ -0.24
CTCFL-217ENST00000608425 KLC4Q9NSK0 619 aa13.57□□□□□ -0.24
CTCFL-217ENST00000608425 ANO10Q9NW15 660 aa13.57□□□□□ -0.24
CTCFL-217ENST00000608425 TMEM232C9JQI7 657 aa13.57□□□□□ -0.24
CTCFL-217ENST00000608425 NRDCO43847 1150 aa13.57□□□□□ -0.24
CTCFL-217ENST00000608425 RPS6KA3P51812 740 aa13.57□□□□□ -0.24
CTCFL-217ENST00000608425 FOSBP53539 338 aa13.57□□□□□ -0.24
CTCFL-217ENST00000608425 SPDYE1Q8NFV5 336 aaPredicted RBP13.57□□□□□ -0.24
CTCFL-217ENST00000608425 SPDL1Q96EA4 605 aa13.57□□□□□ -0.24
CTCFL-217ENST00000608425 PXDNQ92626 1479 aa13.56□□□□□ -0.24
CTCFL-217ENST00000608425 ERLIN1O75477 346 aa13.56□□□□□ -0.24
CTCFL-217ENST00000608425 FAM163BP0C2L3 166 aa13.56□□□□□ -0.24
CTCFL-217ENST00000608425 C1QTNF12Q5T7M4 302 aa13.56□□□□□ -0.24
CTCFL-217ENST00000608425 FAM228AQ86W67 206 aa13.56□□□□□ -0.24
CTCFL-217ENST00000608425 COL18A1P39060 1754 aa13.56□□□□□ -0.24
CTCFL-217ENST00000608425 TMEM94Q12767 1356 aa13.56□□□□□ -0.24
CTCFL-217ENST00000608425 SALL3Q9BXA9 1300 aa13.56□□□□□ -0.24
CTCFL-217ENST00000608425 NAP1L1P55209 391 aaKnown RBP13.56□□□□□ -0.24
CTCFL-217ENST00000608425 STK3Q13188 491 aa13.56□□□□□ -0.24
CTCFL-217ENST00000608425 THEMIS2Q5TEJ8 643 aa13.56□□□□□ -0.24
CTCFL-217ENST00000608425 MYSM1Q5VVJ2 828 aa13.56□□□□□ -0.24
CTCFL-217ENST00000608425 BIN2Q9UBW5 565 aaPredicted RBP13.56□□□□□ -0.24
CTCFL-217ENST00000608425 F6X3S4 739 aa13.55□□□□□ -0.24
CTCFL-217ENST00000608425 GNAI2P04899 355 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms