RNA–Protein interactions for RNA: ENST00000608272.1

LINC00963-210, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 612 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-210ENST00000608272 ZNF112Q9UJU3 913 aa16.44■□□□□ 0.22
LINC00963-210ENST00000608272 SLC45A1Q9Y2W3 748 aa16.44■□□□□ 0.22
LINC00963-210ENST00000608272 CXCL11O14625 94 aa16.43■□□□□ 0.22
LINC00963-210ENST00000608272 CTGFP29279 349 aa16.43■□□□□ 0.22
LINC00963-210ENST00000608272 CCDC27Q2M243 656 aa16.43■□□□□ 0.22
LINC00963-210ENST00000608272 TWISTNBQ3B726 338 aaPredicted RBP16.43■□□□□ 0.22
LINC00963-210ENST00000608272 LRIT3Q3SXY7 679 aa16.43■□□□□ 0.22
LINC00963-210ENST00000608272 NCBP3Q53F19 620 aaKnown RBP16.43■□□□□ 0.22
LINC00963-210ENST00000608272 FKBP5Q13451 457 aaPredicted RBP16.42■□□□□ 0.22
LINC00963-210ENST00000608272 HHIPL2Q6UWX4 724 aa16.42■□□□□ 0.22
LINC00963-210ENST00000608272 ZKSCAN4Q969J2 545 aaPredicted RBP16.42■□□□□ 0.22
LINC00963-210ENST00000608272 GDF15Q99988 308 aa16.42■□□□□ 0.22
LINC00963-210ENST00000608272 CRISPLD2Q9H0B8 497 aa16.42■□□□□ 0.22
LINC00963-210ENST00000608272 PAK6Q9NQU5 681 aaPredicted RBP16.42■□□□□ 0.22
LINC00963-210ENST00000608272 MROH5Q6ZUA9 1318 aa16.42■□□□□ 0.22
LINC00963-210ENST00000608272 KIF16BQ96L93 1317 aa16.42■□□□□ 0.22
LINC00963-210ENST00000608272 PRKCZQ05513 592 aa16.41■□□□□ 0.22
LINC00963-210ENST00000608272 FASTKD5Q7L8L6 764 aaKnown RBP16.41■□□□□ 0.22
LINC00963-210ENST00000608272 FBXO33Q7Z6M2 555 aa16.41■□□□□ 0.22
LINC00963-210ENST00000608272 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.41■□□□□ 0.22
LINC00963-210ENST00000608272 JAG2Q9Y219 1238 aa16.41■□□□□ 0.22
LINC00963-210ENST00000608272 CHMP3Q9Y3E7 222 aa16.41■□□□□ 0.22
LINC00963-210ENST00000608272 IL16Q14005 1332 aa16.41■□□□□ 0.22
LINC00963-210ENST00000608272 MGAMO43451 1857 aa16.4■□□□□ 0.22
LINC00963-210ENST00000608272 SOX1O00570 391 aaPredicted RBP16.4■□□□□ 0.22
LINC00963-210ENST00000608272 ADCY3O60266 1144 aa16.4■□□□□ 0.22
LINC00963-210ENST00000608272 CAVIN4Q5BKX8 364 aa16.4■□□□□ 0.22
LINC00963-210ENST00000608272 LMBR1LQ6UX01 489 aa16.4■□□□□ 0.22
LINC00963-210ENST00000608272 G2E3Q7L622 706 aa16.4■□□□□ 0.22
LINC00963-210ENST00000608272 NECAB2Q7Z6G3 386 aa16.4■□□□□ 0.22
LINC00963-210ENST00000608272 VPS37DQ86XT2 251 aa16.4■□□□□ 0.22
LINC00963-210ENST00000608272 FAM151AQ8WW52 585 aa16.4■□□□□ 0.22
LINC00963-210ENST00000608272 UNC93B1Q9H1C4 597 aa16.4■□□□□ 0.22
LINC00963-210ENST00000608272 TFRCP02786 760 aaKnown RBP16.39■□□□□ 0.21
LINC00963-210ENST00000608272 GYG1P46976 350 aa16.39■□□□□ 0.21
LINC00963-210ENST00000608272 MOGSQ13724 837 aa16.39■□□□□ 0.21
LINC00963-210ENST00000608272 LRCH3Q96II8 777 aa16.39■□□□□ 0.21
LINC00963-210ENST00000608272 APOBEC3HQ6NTF7 200 aaKnown RBP16.38■□□□□ 0.21
LINC00963-210ENST00000608272 DEFB123Q8N688 67 aa16.38■□□□□ 0.21
LINC00963-210ENST00000608272 STAP2Q9UGK3 403 aa16.38■□□□□ 0.21
LINC00963-210ENST00000608272 GRM8O00222 908 aa16.37■□□□□ 0.21
LINC00963-210ENST00000608272 PLIN1O60240 522 aa16.37■□□□□ 0.21
LINC00963-210ENST00000608272 INHAP05111 366 aa16.37■□□□□ 0.21
LINC00963-210ENST00000608272 FLT3LGP49771 235 aa16.37■□□□□ 0.21
LINC00963-210ENST00000608272 BEND3Q5T5X7 828 aa16.37■□□□□ 0.21
LINC00963-210ENST00000608272 FRAT2O75474 233 aaPredicted RBP16.36■□□□□ 0.21
LINC00963-210ENST00000608272 INPP5BP32019 993 aa16.36■□□□□ 0.21
LINC00963-210ENST00000608272 A0A0G2JLL6 359 aaPredicted RBP16.35■□□□□ 0.21
LINC00963-210ENST00000608272 TNPO2O14787 897 aaKnown RBP16.35■□□□□ 0.21
LINC00963-210ENST00000608272 ALDH1L1O75891 902 aa16.35■□□□□ 0.21
LINC00963-210ENST00000608272 GPAT2Q6NUI2 795 aa16.35■□□□□ 0.21
LINC00963-210ENST00000608272 PRRT2Q7Z6L0 340 aaPredicted RBP16.35■□□□□ 0.21
LINC00963-210ENST00000608272 TDHQ8IZJ6 230 aa16.35■□□□□ 0.21
LINC00963-210ENST00000608272 COA7Q96BR5 231 aa16.35■□□□□ 0.21
LINC00963-210ENST00000608272 DEFB118Q96PH6 123 aa16.35■□□□□ 0.21
LINC00963-210ENST00000608272 MTMR10Q9NXD2 777 aa16.35■□□□□ 0.21
LINC00963-210ENST00000608272 CACNB3P54284 484 aa16.34■□□□□ 0.21
LINC00963-210ENST00000608272 FAM109BQ6ICB4 259 aaPredicted RBP16.34■□□□□ 0.21
LINC00963-210ENST00000608272 WDR66Q8TBY9 1149 aa16.34■□□□□ 0.21
LINC00963-210ENST00000608272 TSR2Q969E8 191 aaKnown RBP16.34■□□□□ 0.21
LINC00963-210ENST00000608272 PAWRQ96IZ0 340 aaKnown RBP16.34■□□□□ 0.21
LINC00963-210ENST00000608272 ZNF594Q96JF6 807 aaPredicted RBP16.34■□□□□ 0.21
LINC00963-210ENST00000608272 GABRQQ9UN88 632 aa16.34■□□□□ 0.21
LINC00963-210ENST00000608272 ZBTB22O15209 634 aa16.33■□□□□ 0.2
LINC00963-210ENST00000608272 MIGA2Q7L4E1 593 aa16.33■□□□□ 0.2
LINC00963-210ENST00000608272 NBPF3Q9H094 633 aa16.33■□□□□ 0.2
LINC00963-210ENST00000608272 C9orf78Q9NZ63 289 aaPredicted RBP16.33■□□□□ 0.2
LINC00963-210ENST00000608272 PNMA3Q9UL41 463 aa16.33■□□□□ 0.2
LINC00963-210ENST00000608272 COL6A3P12111 3177 aa16.32■□□□□ 0.2
LINC00963-210ENST00000608272 LAMA3Q16787 3333 aa16.32■□□□□ 0.2
LINC00963-210ENST00000608272 PDE8BO95263 885 aa16.32■□□□□ 0.2
LINC00963-210ENST00000608272 CYP2C8P10632 490 aa16.32■□□□□ 0.2
LINC00963-210ENST00000608272 CHAF1AQ13111 956 aaPredicted RBP16.32■□□□□ 0.2
LINC00963-210ENST00000608272 FAM110CQ1W6H9 321 aa16.32■□□□□ 0.2
LINC00963-210ENST00000608272 EPHA10Q5JZY3 1008 aa16.32■□□□□ 0.2
LINC00963-210ENST00000608272 SCYL3Q8IZE3 742 aa16.32■□□□□ 0.2
LINC00963-210ENST00000608272 ALPK3Q96L96 1907 aa16.32■□□□□ 0.2
LINC00963-210ENST00000608272 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.32■□□□□ 0.25e-6■■□□□ 12.5
LINC00963-210ENST00000608272 PICK1Q9NRD5 415 aa16.32■□□□□ 0.2
LINC00963-210ENST00000608272 RPTORQ8N122 1335 aa16.31■□□□□ 0.2
LINC00963-210ENST00000608272 HMGCRP04035 888 aa16.31■□□□□ 0.2
LINC00963-210ENST00000608272 BCAMP50895 628 aa16.31■□□□□ 0.2
LINC00963-210ENST00000608272 GRIK5Q16478 980 aa16.31■□□□□ 0.2
LINC00963-210ENST00000608272 WWC1Q8IX03 1113 aa16.31■□□□□ 0.2
LINC00963-210ENST00000608272 SMCR8Q8TEV9 937 aaPredicted RBP16.31■□□□□ 0.2
LINC00963-210ENST00000608272 TBC1D2Q9BYX2 928 aa16.31■□□□□ 0.2
LINC00963-210ENST00000608272 IFIT1P09914 478 aaKnown RBP16.3■□□□□ 0.2
LINC00963-210ENST00000608272 ELNP15502 786 aa16.3■□□□□ 0.2
LINC00963-210ENST00000608272 MAP3K10Q02779 954 aa16.3■□□□□ 0.2
LINC00963-210ENST00000608272 RABL6Q3YEC7 729 aaPredicted RBP16.3■□□□□ 0.2
LINC00963-210ENST00000608272 VGLL2Q8N8G2 317 aa16.3■□□□□ 0.2
LINC00963-210ENST00000608272 COL25A1Q9BXS0 654 aaPredicted RBP16.3■□□□□ 0.2
LINC00963-210ENST00000608272 PRKRIP1Q9H875 184 aaPredicted RBP16.3■□□□□ 0.2
LINC00963-210ENST00000608272 SPINK5Q9NQ38 1064 aaPredicted RBP16.3■□□□□ 0.2
LINC00963-210ENST00000608272 AFG3L2Q9Y4W6 797 aa16.3■□□□□ 0.2
LINC00963-210ENST00000608272 UTYO14607 1347 aa16.29■□□□□ 0.2
LINC00963-210ENST00000608272 ENTPD3O75355 529 aa16.29■□□□□ 0.2
LINC00963-210ENST00000608272 VAMP4O75379 141 aa16.29■□□□□ 0.2
LINC00963-210ENST00000608272 PTPRAP18433 802 aa16.29■□□□□ 0.2
LINC00963-210ENST00000608272 GCLCP48506 637 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms