RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 C9orf131Q5VYM1 1079 aa13.34□□□□□ -0.27
CTCFL-214ENST00000608108 TEKT1Q969V4 418 aa13.34□□□□□ -0.27
CTCFL-214ENST00000608108 DAGLAQ9Y4D2 1042 aa13.34□□□□□ -0.27
CTCFL-214ENST00000608108 FOCADQ5VW36 1801 aa13.33□□□□□ -0.28
CTCFL-214ENST00000608108 GPR75-ASB3A0A0A6YYF3 556 aa13.33□□□□□ -0.28
CTCFL-214ENST00000608108 EPB41L2O43491 1005 aaKnown RBP13.33□□□□□ -0.28
CTCFL-214ENST00000608108 BAG3O95817 575 aa13.33□□□□□ -0.28
CTCFL-214ENST00000608108 GNAT2P19087 354 aa13.33□□□□□ -0.28
CTCFL-214ENST00000608108 BTDP43251 543 aa13.33□□□□□ -0.28
CTCFL-214ENST00000608108 DYNLL1P63167 89 aaKnown RBP13.33□□□□□ -0.28
CTCFL-214ENST00000608108 FAM163AQ96GL9 167 aaPredicted RBP13.33□□□□□ -0.28
CTCFL-214ENST00000608108 GMLQ99445 158 aa13.33□□□□□ -0.28
CTCFL-214ENST00000608108 DSCC1Q9BVC3 393 aa13.33□□□□□ -0.28
CTCFL-214ENST00000608108 C22orf23Q9BZE7 217 aa13.33□□□□□ -0.28
CTCFL-214ENST00000608108 SERPINA10Q9UK55 444 aa13.33□□□□□ -0.28
CTCFL-214ENST00000608108 GJA3Q9Y6H8 435 aa13.33□□□□□ -0.28
CTCFL-214ENST00000608108 BAZ2AQ9UIF9 1905 aaKnown RBP13.33□□□□□ -0.28
CTCFL-214ENST00000608108 CRKP46108 304 aa13.32□□□□□ -0.28
CTCFL-214ENST00000608108 HDLBPQ00341 1268 aaKnown RBP13.32□□□□□ -0.28
CTCFL-214ENST00000608108 HHIPL2Q6UWX4 724 aa13.32□□□□□ -0.28
CTCFL-214ENST00000608108 CHRDL2Q6WN34 429 aa13.32□□□□□ -0.28
CTCFL-214ENST00000608108 CERS3Q8IU89 383 aa13.32□□□□□ -0.28
CTCFL-214ENST00000608108 OGFOD1Q8N543 542 aa13.32□□□□□ -0.28
CTCFL-214ENST00000608108 MAP4K1Q92918 833 aa13.32□□□□□ -0.28
CTCFL-214ENST00000608108 SLC4A4Q9Y6R1 1079 aa13.32□□□□□ -0.28
CTCFL-214ENST00000608108 NAV1Q8NEY1 1877 aa13.32□□□□□ -0.28
CTCFL-214ENST00000608108 LAMA4Q16363 1823 aa13.32□□□□□ -0.28
CTCFL-214ENST00000608108 FOXP2O15409 715 aa13.31□□□□□ -0.28
CTCFL-214ENST00000608108 PRKAB2O43741 272 aa13.31□□□□□ -0.28
CTCFL-214ENST00000608108 APPP05067 770 aa13.31□□□□□ -0.28
CTCFL-214ENST00000608108 USP17L8P0C7I0 530 aa13.31□□□□□ -0.28
CTCFL-214ENST00000608108 MCCP23508 829 aa13.31□□□□□ -0.28
CTCFL-214ENST00000608108 RPS12P25398 132 aaKnown RBP13.31□□□□□ -0.28
CTCFL-214ENST00000608108 RBM5P52756 815 aaKnown RBP eCLIP13.31□□□□□ -0.28
CTCFL-214ENST00000608108 TBC1D32Q96NH3 1257 aa13.31□□□□□ -0.28
CTCFL-214ENST00000608108 MRIQ9BWK5 157 aa13.31□□□□□ -0.28
CTCFL-214ENST00000608108 TSHZ2Q9NRE2 1034 aa13.31□□□□□ -0.28
CTCFL-214ENST00000608108 HDAC9Q9UKV0 1011 aa13.31□□□□□ -0.28
CTCFL-214ENST00000608108 RBM8AQ9Y5S9 174 aaKnown RBP13.31□□□□□ -0.28
CTCFL-214ENST00000608108 PLCG2P16885 1265 aa13.31□□□□□ -0.28
CTCFL-214ENST00000608108 GMPSP49915 693 aaPredicted RBP13.31□□□□□ -0.28
CTCFL-214ENST00000608108 PPP4CP60510 307 aa13.31□□□□□ -0.28
CTCFL-214ENST00000608108 GPC2Q8N158 579 aa13.31□□□□□ -0.28
CTCFL-214ENST00000608108 SH3RF3Q8TEJ3 882 aaPredicted RBP13.31□□□□□ -0.28
CTCFL-214ENST00000608108 SDR42E1Q8WUS8 393 aa13.31□□□□□ -0.28
CTCFL-214ENST00000608108 ZDHHC15Q96MV8 337 aa13.31□□□□□ -0.28
CTCFL-214ENST00000608108 CRNKL1Q9BZJ0 848 aaKnown RBP13.31□□□□□ -0.28
CTCFL-214ENST00000608108 LAMB1P07942 1786 aa13.3□□□□□ -0.28
CTCFL-214ENST00000608108 RPAP1Q9BWH6 1393 aaPredicted RBP13.3□□□□□ -0.28
CTCFL-214ENST00000608108 GSG1L2A8MUP6 293 aa13.3□□□□□ -0.28
CTCFL-214ENST00000608108 PATL2C9JE40 543 aaKnown RBP13.3□□□□□ -0.28
CTCFL-214ENST00000608108 HSPA4P34932 840 aa13.3□□□□□ -0.28
CTCFL-214ENST00000608108 RBM25P49756 843 aaKnown RBP13.3□□□□□ -0.28
CTCFL-214ENST00000608108 CFAP100Q494V2 611 aa13.3□□□□□ -0.28
CTCFL-214ENST00000608108 APOBEC3HQ6NTF7 200 aaKnown RBP13.3□□□□□ -0.28
CTCFL-214ENST00000608108 NACAP1Q9BZK3 213 aa13.3□□□□□ -0.28
CTCFL-214ENST00000608108 EPB41L4AQ9HCS5 686 aaPredicted RBP13.3□□□□□ -0.28
CTCFL-214ENST00000608108 PCDHAC2Q9Y5I4 1007 aa13.3□□□□□ -0.28
CTCFL-214ENST00000608108 MYH1P12882 1939 aa13.29□□□□□ -0.28
CTCFL-214ENST00000608108 TDO2P48775 406 aa13.29□□□□□ -0.28
CTCFL-214ENST00000608108 TEX11Q8IYF3 940 aa13.29□□□□□ -0.28
CTCFL-214ENST00000608108 IFNL3Q8IZI9 196 aa13.29□□□□□ -0.28
CTCFL-214ENST00000608108 NAPBQ9H115 298 aa13.29□□□□□ -0.28
CTCFL-214ENST00000608108 ZMYM6O95789 1325 aa13.29□□□□□ -0.28
CTCFL-214ENST00000608108 ZC3H4Q9UPT8 1303 aaKnown RBP13.29□□□□□ -0.28
CTCFL-214ENST00000608108 DDX60LQ5H9U9 1706 aaKnown RBP13.29□□□□□ -0.28
CTCFL-214ENST00000608108 SHTN1A0MZ66 631 aa13.28□□□□□ -0.28
CTCFL-214ENST00000608108 FGAP02671 866 aa13.28□□□□□ -0.28
CTCFL-214ENST00000608108 RHBDL3P58872 404 aa13.28□□□□□ -0.28
CTCFL-214ENST00000608108 CREB3L3Q68CJ9 461 aa13.28□□□□□ -0.28
CTCFL-214ENST00000608108 MICALL2Q8IY33 904 aa13.28□□□□□ -0.28
CTCFL-214ENST00000608108 DPF2Q92785 391 aa13.28□□□□□ -0.28
CTCFL-214ENST00000608108 CTNNA3Q9UI47 895 aa13.28□□□□□ -0.28
CTCFL-214ENST00000608108 SPDYE2BA6NHP3 402 aa13.28□□□□□ -0.28
CTCFL-214ENST00000608108 SPDYE6P0CI01 402 aa13.28□□□□□ -0.28
CTCFL-214ENST00000608108 USP5P45974 858 aa13.28□□□□□ -0.28
CTCFL-214ENST00000608108 MMP14P50281 582 aa13.28□□□□□ -0.28
CTCFL-214ENST00000608108 ZNF280AP59817 542 aaPredicted RBP13.28□□□□□ -0.28
CTCFL-214ENST00000608108 NECTIN1Q15223 517 aa13.28□□□□□ -0.28
CTCFL-214ENST00000608108 DLGAP5Q15398 846 aa13.28□□□□□ -0.28
CTCFL-214ENST00000608108 RNF20Q5VTR2 975 aa13.28□□□□□ -0.28
CTCFL-214ENST00000608108 CDC42EP5Q6NZY7 148 aa13.28□□□□□ -0.28
CTCFL-214ENST00000608108 TGFBRAP1Q8WUH2 860 aa13.28□□□□□ -0.28
CTCFL-214ENST00000608108 DDRGK1Q96HY6 314 aa13.28□□□□□ -0.28
CTCFL-214ENST00000608108 MYOZ2Q9NPC6 264 aa13.28□□□□□ -0.28
CTCFL-214ENST00000608108 ATP8A2Q9NTI2 1148 aa13.28□□□□□ -0.28
CTCFL-214ENST00000608108 USP40Q9NVE5 1235 aa13.28□□□□□ -0.28
CTCFL-214ENST00000608108 PALD1Q9ULE6 856 aa13.28□□□□□ -0.28
CTCFL-214ENST00000608108 SLC27A2O14975 620 aa13.27□□□□□ -0.29
CTCFL-214ENST00000608108 ZKSCAN1P17029 563 aaPredicted RBP13.27□□□□□ -0.29
CTCFL-214ENST00000608108 ALX1Q15699 326 aa13.27□□□□□ -0.29
CTCFL-214ENST00000608108 IMMTQ16891 758 aaKnown RBP13.27□□□□□ -0.29
CTCFL-214ENST00000608108 GIMAP6Q6P9H5 292 aa13.27□□□□□ -0.29
CTCFL-214ENST00000608108 PRMT6Q96LA8 375 aaPredicted RBP13.27□□□□□ -0.29
CTCFL-214ENST00000608108 DCP1AQ9NPI6 582 aaPredicted RBP13.27□□□□□ -0.29
CTCFL-214ENST00000608108 CNOT7Q9UIV1 285 aaKnown RBP13.27□□□□□ -0.29
CTCFL-214ENST00000608108 WDHD1O75717 1129 aaPredicted RBP13.26□□□□□ -0.29
CTCFL-214ENST00000608108 DDNO94850 711 aaPredicted RBP13.26□□□□□ -0.29
CTCFL-214ENST00000608108 CYP21A2P08686 494 aa13.26□□□□□ -0.29
CTCFL-214ENST00000608108 ANAPC15P60006 121 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms