RNA–Protein interactions for RNA: ENST00000607559.1

TPM2-208, Transcript of tropomyosin 2, human

TSL 2

Gene TPM2, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM2-208	ENST00000607559	AKAP2	Q9Y2D5	859 aa		13.31	□□□□□ -0.28
TPM2-208	ENST00000607559	SSC5D	A1L4H1	1573 aa		13.31	□□□□□ -0.28
TPM2-208	ENST00000607559	TRPA1	O75762	1119 aa		13.3	□□□□□ -0.28
TPM2-208	ENST00000607559	ZBTB48	P10074	688 aa	Predicted RBP	13.3	□□□□□ -0.28
TPM2-208	ENST00000607559	RGS19	P49795	217 aa		13.3	□□□□□ -0.28
TPM2-208	ENST00000607559	SPRYD7	Q5W111	196 aa		13.3	□□□□□ -0.28
TPM2-208	ENST00000607559	TMEM57	Q8N5G2	664 aa		13.3	□□□□□ -0.28
TPM2-208	ENST00000607559	SSH3	Q8TE77	659 aa		13.3	□□□□□ -0.28
TPM2-208	ENST00000607559	FAM163A	Q96GL9	167 aa	Predicted RBP	13.3	□□□□□ -0.28
TPM2-208	ENST00000607559	PNMA6E	A0A0J9YXQ4	647 aa		13.29	□□□□□ -0.28
TPM2-208	ENST00000607559	CHRM1	P11229	460 aa	Predicted RBP	13.29	□□□□□ -0.28
TPM2-208	ENST00000607559	TNNI2	P48788	182 aa		13.29	□□□□□ -0.28
TPM2-208	ENST00000607559	TIMM10	P62072	90 aa		13.29	□□□□□ -0.28
TPM2-208	ENST00000607559	ATP8B2	P98198	1209 aa		13.29	□□□□□ -0.28
TPM2-208	ENST00000607559	CHAF1A	Q13111	956 aa	Predicted RBP	13.29	□□□□□ -0.28
TPM2-208	ENST00000607559	TTLL12	Q14166	644 aa	Predicted RBP	13.29	□□□□□ -0.28
TPM2-208	ENST00000607559	CCDC102B	Q68D86	513 aa		13.29	□□□□□ -0.28
TPM2-208	ENST00000607559	CLUAP1	Q96AJ1	413 aa		13.29	□□□□□ -0.28
TPM2-208	ENST00000607559	SLC10A4	Q96EP9	437 aa		13.29	□□□□□ -0.28
TPM2-208	ENST00000607559	GPR108	Q9NPR9	543 aa		13.29	□□□□□ -0.28
TPM2-208	ENST00000607559	ANGEL1	Q9UNK9	670 aa	Known RBP	13.29	□□□□□ -0.28
TPM2-208	ENST00000607559	PHKA1	P46020	1223 aa		13.28	□□□□□ -0.28
TPM2-208	ENST00000607559	IREB2	P48200	963 aa	Known RBP	13.28	□□□□□ -0.28
TPM2-208	ENST00000607559	TFCP2	Q12800	502 aa		13.28	□□□□□ -0.28
TPM2-208	ENST00000607559	IFNL1	Q8IU54	200 aa		13.28	□□□□□ -0.28
TPM2-208	ENST00000607559	ANKRD13A	Q8IZ07	590 aa		13.28	□□□□□ -0.28
TPM2-208	ENST00000607559	ZGPAT	Q8N5A5	531 aa	Known RBP	13.28	□□□□□ -0.28
TPM2-208	ENST00000607559	VEZT	Q9HBM0	779 aa		13.28	□□□□□ -0.28
TPM2-208	ENST00000607559	NOP58	Q9Y2X3	529 aa	Known RBP	13.28	□□□□□ -0.28
TPM2-208	ENST00000607559	ARAP2	Q8WZ64	1704 aa		13.27	□□□□□ -0.28
TPM2-208	ENST00000607559	ECM29	Q5VYK3	1845 aa		13.27	□□□□□ -0.28
TPM2-208	ENST00000607559		A0A1B0GUL7	405 aa		13.27	□□□□□ -0.29
TPM2-208	ENST00000607559	TESPA1	A2RU30	521 aa	Predicted RBP	13.27	□□□□□ -0.29
TPM2-208	ENST00000607559	IGSF3	O75054	1194 aa		13.27	□□□□□ -0.29
TPM2-208	ENST00000607559	RLBP1	P12271	317 aa		13.27	□□□□□ -0.29
TPM2-208	ENST00000607559	MLLT1	Q03111	559 aa	Predicted RBP	13.27	□□□□□ -0.29
TPM2-208	ENST00000607559	SREBF2	Q12772	1141 aa		13.27	□□□□□ -0.29
TPM2-208	ENST00000607559	MVP	Q14764	893 aa	Known RBP	13.27	□□□□□ -0.29
TPM2-208	ENST00000607559	XAGE2	Q96GT9	111 aa		13.27	□□□□□ -0.29
TPM2-208	ENST00000607559	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.27	□□□□□ -0.29
TPM2-208	ENST00000607559	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.27	□□□□□ -0.29
TPM2-208	ENST00000607559	MANSC4	A6NHS7	340 aa	Predicted RBP	13.26	□□□□□ -0.29
TPM2-208	ENST00000607559	GAK	O14976	1311 aa		13.26	□□□□□ -0.29
TPM2-208	ENST00000607559	ALDH1A1	P00352	501 aa		13.26	□□□□□ -0.29
TPM2-208	ENST00000607559	LDHB	P07195	334 aa	Known RBP	13.26	□□□□□ -0.29
TPM2-208	ENST00000607559	PRDX5	P30044	214 aa		13.26	□□□□□ -0.29
TPM2-208	ENST00000607559	ADORA1	P30542	326 aa		13.26	□□□□□ -0.29
TPM2-208	ENST00000607559	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
TPM2-208	ENST00000607559	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.26	□□□□□ -0.29
TPM2-208	ENST00000607559	HOOK2	Q96ED9	719 aa		13.26	□□□□□ -0.29
TPM2-208	ENST00000607559	CLMN	Q96JQ2	1002 aa		13.26	□□□□□ -0.29
TPM2-208	ENST00000607559	TMEM39B	Q9GZU3	492 aa		13.26	□□□□□ -0.29
TPM2-208	ENST00000607559	PCDHB8	Q9UN66	801 aa		13.26	□□□□□ -0.29
TPM2-208	ENST00000607559	DAGLA	Q9Y4D2	1042 aa		13.26	□□□□□ -0.29
TPM2-208	ENST00000607559	TCP10L2	B9ZVM9	353 aa		13.25	□□□□□ -0.29
TPM2-208	ENST00000607559	MS4A1	P11836	297 aa		13.25	□□□□□ -0.29
TPM2-208	ENST00000607559	ARID4A	P29374	1257 aa	Predicted RBP	13.25	□□□□□ -0.29
TPM2-208	ENST00000607559	MAP3K9	P80192	1104 aa		13.25	□□□□□ -0.29
TPM2-208	ENST00000607559	MAP3K10	Q02779	954 aa		13.25	□□□□□ -0.29
TPM2-208	ENST00000607559	RASGRF1	Q13972	1273 aa		13.25	□□□□□ -0.29
TPM2-208	ENST00000607559	PRKG1	Q13976	671 aa		13.25	□□□□□ -0.29
TPM2-208	ENST00000607559	CDC42EP5	Q6NZY7	148 aa		13.25	□□□□□ -0.29
TPM2-208	ENST00000607559	CTU1	Q7Z7A3	348 aa	Known RBP	13.25	□□□□□ -0.29
TPM2-208	ENST00000607559	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.25	□□□□□ -0.29
TPM2-208	ENST00000607559	FAM151A	Q8WW52	585 aa		13.25	□□□□□ -0.29
TPM2-208	ENST00000607559	WNK4	Q96J92	1243 aa		13.25	□□□□□ -0.29
TPM2-208	ENST00000607559	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.25	□□□□□ -0.29
TPM2-208	ENST00000607559	FZD1	Q9UP38	647 aa		13.25	□□□□□ -0.29
TPM2-208	ENST00000607559	TRPC6	Q9Y210	931 aa		13.25	□□□□□ -0.29
TPM2-208	ENST00000607559	MAP4K4	O95819	1239 aa	Predicted RBP	13.24	□□□□□ -0.29
TPM2-208	ENST00000607559	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.24	□□□□□ -0.29
TPM2-208	ENST00000607559	CDAN1	Q8IWY9	1227 aa		13.24	□□□□□ -0.29
TPM2-208	ENST00000607559	MS4A4A	Q96JQ5	239 aa		13.24	□□□□□ -0.29
TPM2-208	ENST00000607559	IDI2	Q9BXS1	227 aa		13.24	□□□□□ -0.29
TPM2-208	ENST00000607559	TMOD2	Q9NZR1	351 aa		13.24	□□□□□ -0.29
TPM2-208	ENST00000607559	ZNF112	Q9UJU3	913 aa		13.24	□□□□□ -0.29
TPM2-208	ENST00000607559	GJA5	P36382	358 aa		13.23	□□□□□ -0.29
TPM2-208	ENST00000607559	DIXDC1	Q155Q3	683 aa		13.23	□□□□□ -0.29
TPM2-208	ENST00000607559	PKN2	Q16513	984 aa	Known RBP	13.23	□□□□□ -0.29
TPM2-208	ENST00000607559	SLF2	Q8IX21	1173 aa		13.23	□□□□□ -0.29
TPM2-208	ENST00000607559	FTSJ3	Q8IY81	847 aa	Known RBP	13.23	□□□□□ -0.29
TPM2-208	ENST00000607559	HMG20B	Q9P0W2	317 aa		13.23	□□□□□ -0.29
TPM2-208	ENST00000607559	ENTPD3	O75355	529 aa		13.22	□□□□□ -0.29
TPM2-208	ENST00000607559	UQCRFS1P1	P0C7P4	283 aa		13.22	□□□□□ -0.29
TPM2-208	ENST00000607559	ZNF384	Q8TF68	577 aa		13.22	□□□□□ -0.29
TPM2-208	ENST00000607559	FAM198A	Q9UFP1	575 aa		13.22	□□□□□ -0.29
TPM2-208	ENST00000607559	GPR75-ASB3	A0A0A6YYF3	556 aa		13.21	□□□□□ -0.29
TPM2-208	ENST00000607559	SPDYE5	A6NIY4	337 aa		13.21	□□□□□ -0.29
TPM2-208	ENST00000607559	GPR25	O00155	361 aa		13.21	□□□□□ -0.29
TPM2-208	ENST00000607559	CACNB3	P54284	484 aa		13.21	□□□□□ -0.29
TPM2-208	ENST00000607559	VGLL4	Q14135	290 aa		13.21	□□□□□ -0.29
TPM2-208	ENST00000607559	DCAF15	Q66K64	600 aa		13.21	□□□□□ -0.29
TPM2-208	ENST00000607559	ITPRIP	Q8IWB1	547 aa		13.21	□□□□□ -0.29
TPM2-208	ENST00000607559	SPATA5	Q8NB90	893 aa		13.21	□□□□□ -0.29
TPM2-208	ENST00000607559	NEUROD6	Q96NK8	337 aa		13.21	□□□□□ -0.29
TPM2-208	ENST00000607559	PTPN18	Q99952	460 aa		13.21	□□□□□ -0.29
TPM2-208	ENST00000607559	LAMB1	P07942	1786 aa		13.21	□□□□□ -0.29
TPM2-208	ENST00000607559	RFX7	Q2KHR2	1363 aa		13.2	□□□□□ -0.3
TPM2-208	ENST00000607559	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
TPM2-208	ENST00000607559	TBC1D8	O95759	1140 aa		13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms