RNA–Protein interactions for RNA: ENST00000606170.1

PRDM16-209, Transcript of PR/SET domain 16, humanhuman

TSL 4

Gene PRDM16, Length 557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-209ENST00000606170 CEP85Q6P2H3 762 aa20.7■□□□□ 0.9
PRDM16-209ENST00000606170 HMG20BQ9P0W2 317 aa20.7■□□□□ 0.9
PRDM16-209ENST00000606170 PDS5AQ29RF7 1337 aaKnown RBP20.7■□□□□ 0.9
PRDM16-209ENST00000606170 MANSC4A6NHS7 340 aaPredicted RBP20.69■□□□□ 0.9
PRDM16-209ENST00000606170 TNNI3KQ59H18 835 aa20.69■□□□□ 0.9
PRDM16-209ENST00000606170 PI16Q6UXB8 463 aa20.69■□□□□ 0.9
PRDM16-209ENST00000606170 ERICH6Q7L0X2 663 aa20.69■□□□□ 0.9
PRDM16-209ENST00000606170 SPATA5Q8NB90 893 aa20.69■□□□□ 0.9
PRDM16-209ENST00000606170 ABHD8Q96I13 439 aa20.69■□□□□ 0.9
PRDM16-209ENST00000606170 FPGT-TNNI3KV9GXZ4 949 aa20.69■□□□□ 0.9
PRDM16-209ENST00000606170 ARID4AP29374 1257 aaPredicted RBP20.68■□□□□ 0.9
PRDM16-209ENST00000606170 MAP3K9P80192 1104 aa20.68■□□□□ 0.9
PRDM16-209ENST00000606170 NFIAQ12857 509 aa20.68■□□□□ 0.9
PRDM16-209ENST00000606170 DGKZQ13574 1117 aa20.68■□□□□ 0.9
PRDM16-209ENST00000606170 SLF2Q8IX21 1173 aa20.68■□□□□ 0.9
PRDM16-209ENST00000606170 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.68■□□□□ 0.9
PRDM16-209ENST00000606170 FAM151AQ8WW52 585 aa20.68■□□□□ 0.9
PRDM16-209ENST00000606170 HOOK2Q96ED9 719 aa20.68■□□□□ 0.9
PRDM16-209ENST00000606170 GPR108Q9NPR9 543 aa20.68■□□□□ 0.9
PRDM16-209ENST00000606170 COG6Q9Y2V7 657 aa20.68■□□□□ 0.9
PRDM16-209ENST00000606170 CSADQ9Y600 493 aa20.68■□□□□ 0.9
PRDM16-209ENST00000606170 UQCRFS1P1P0C7P4 283 aa20.67■□□□□ 0.9
PRDM16-209ENST00000606170 GJA5P36382 358 aa20.67■□□□□ 0.9
PRDM16-209ENST00000606170 VGLL4Q14135 290 aa20.67■□□□□ 0.9
PRDM16-209ENST00000606170 CCDC158Q5M9N0 1113 aa20.67■□□□□ 0.9
PRDM16-209ENST00000606170 TTC39AQ5SRH9 613 aa20.67■□□□□ 0.9
PRDM16-209ENST00000606170 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.67■□□□□ 0.9
PRDM16-209ENST00000606170 TBC1D9Q6ZT07 1266 aa20.67■□□□□ 0.9
PRDM16-209ENST00000606170 OPTNQ96CV9 577 aa20.67■□□□□ 0.9
PRDM16-209ENST00000606170 DBNDD2Q9BQY9 259 aa20.67■□□□□ 0.9
PRDM16-209ENST00000606170 MCOLN1Q9GZU1 580 aa20.67■□□□□ 0.9
PRDM16-209ENST00000606170 NOP58Q9Y2X3 529 aaKnown RBP20.67■□□□□ 0.9
PRDM16-209ENST00000606170 MCAMP43121 646 aa20.66■□□□□ 0.9
PRDM16-209ENST00000606170 INHBEP58166 350 aa20.66■□□□□ 0.9
PRDM16-209ENST00000606170 MECOMQ03112 1051 aa20.66■□□□□ 0.9
PRDM16-209ENST00000606170 MIGA2Q7L4E1 593 aa20.66■□□□□ 0.9
PRDM16-209ENST00000606170 WRNIP1Q96S55 665 aa20.66■□□□□ 0.9
PRDM16-209ENST00000606170 GAKO14976 1311 aa20.66■□□□□ 0.9
PRDM16-209ENST00000606170 RPAP1Q9BWH6 1393 aaPredicted RBP20.65■□□□□ 0.9
PRDM16-209ENST00000606170 BTDP43251 543 aa20.65■□□□□ 0.9
PRDM16-209ENST00000606170 DCAF15Q66K64 600 aa20.65■□□□□ 0.9
PRDM16-209ENST00000606170 IFNL1Q8IU54 200 aa20.65■□□□□ 0.9
PRDM16-209ENST00000606170 CNKSR2Q8WXI2 1034 aa20.65■□□□□ 0.9
PRDM16-209ENST00000606170 RAI14Q9P0K7 980 aa20.65■□□□□ 0.9
PRDM16-209ENST00000606170 FAM198AQ9UFP1 575 aa20.65■□□□□ 0.9
PRDM16-209ENST00000606170 DDX19BQ9UMR2 479 aa20.65■□□□□ 0.9
PRDM16-209ENST00000606170 EXOC6BQ9Y2D4 811 aa20.65■□□□□ 0.9
PRDM16-209ENST00000606170 MROH7-TTC4A0A0A0MT08 1334 aa20.64■□□□□ 0.89
PRDM16-209ENST00000606170 ZKSCAN4Q969J2 545 aaPredicted RBP20.64■□□□□ 0.89
PRDM16-209ENST00000606170 FAM163AQ96GL9 167 aaPredicted RBP20.64■□□□□ 0.89
PRDM16-209ENST00000606170 CCDC8Q9H0W5 538 aaPredicted RBP20.64■□□□□ 0.89
PRDM16-209ENST00000606170 SNRKQ9NRH2 765 aa20.64■□□□□ 0.89
PRDM16-209ENST00000606170 LRP2BPQ9P2M1 347 aa20.64■□□□□ 0.89
PRDM16-209ENST00000606170 OTOFQ9HC10 1997 aa20.63■□□□□ 0.89
PRDM16-209ENST00000606170 MYH2Q9UKX2 1941 aa20.63■□□□□ 0.89
PRDM16-209ENST00000606170 ALDH1A1P00352 501 aa20.63■□□□□ 0.89
PRDM16-209ENST00000606170 RGS3P49796 1198 aa20.63■□□□□ 0.89
PRDM16-209ENST00000606170 ZFPM1Q8IX07 1006 aa20.63■□□□□ 0.89
PRDM16-209ENST00000606170 ZNF296Q8WUU4 475 aaPredicted RBP20.63■□□□□ 0.89
PRDM16-209ENST00000606170 OTUD5Q96G74 571 aa20.63■□□□□ 0.89
PRDM16-209ENST00000606170 ZNF341Q9BYN7 854 aa20.63■□□□□ 0.89
PRDM16-209ENST00000606170 CCDC85CA6NKD9 419 aa20.62■□□□□ 0.89
PRDM16-209ENST00000606170 GPR25O00155 361 aa20.62■□□□□ 0.89
PRDM16-209ENST00000606170 IGF2BP3O00425 579 aaKnown RBP eCLIP20.62■□□□□ 0.89
PRDM16-209ENST00000606170 NSUN4Q96CB9 384 aaKnown RBP20.62■□□□□ 0.89
PRDM16-209ENST00000606170 R3HDMLQ9H3Y0 253 aa20.62■□□□□ 0.89
PRDM16-209ENST00000606170 TLR7Q9NYK1 1049 aaKnown RBP20.62■□□□□ 0.89
PRDM16-209ENST00000606170 DBNLQ9UJU6 430 aaKnown RBP20.62■□□□□ 0.89
PRDM16-209ENST00000606170 LDHCP07864 332 aa20.61■□□□□ 0.89
PRDM16-209ENST00000606170 GSTO1P78417 241 aa20.61■□□□□ 0.89
PRDM16-209ENST00000606170 PICALMQ13492 652 aa20.61■□□□□ 0.89
PRDM16-209ENST00000606170 OTUD7BQ6GQQ9 843 aa20.61■□□□□ 0.89
PRDM16-209ENST00000606170 ERC1Q8IUD2 1116 aa20.61■□□□□ 0.89
PRDM16-209ENST00000606170 ZSCAN29Q8IWY8 852 aaPredicted RBP20.61■□□□□ 0.89
PRDM16-209ENST00000606170 ZNF384Q8TF68 577 aa20.61■□□□□ 0.89
PRDM16-209ENST00000606170 EAF2Q96CJ1 260 aaPredicted RBP20.61■□□□□ 0.89
PRDM16-209ENST00000606170 IDI2Q9BXS1 227 aa20.61■□□□□ 0.89
PRDM16-209ENST00000606170 ZBTB40Q9NUA8 1239 aa20.61■□□□□ 0.89
PRDM16-209ENST00000606170 SNCAIPQ9Y6H5 919 aa20.61■□□□□ 0.89
PRDM16-209ENST00000606170 GPR75-ASB3A0A0A6YYF3 556 aa20.6■□□□□ 0.89
PRDM16-209ENST00000606170 SPDYE5A6NIY4 337 aa20.6■□□□□ 0.89
PRDM16-209ENST00000606170 ENTPD3O75355 529 aa20.6■□□□□ 0.89
PRDM16-209ENST00000606170 CTU1Q7Z7A3 348 aaKnown RBP20.6■□□□□ 0.89
PRDM16-209ENST00000606170 RPAP2Q8IXW5 612 aaPredicted RBP20.6■□□□□ 0.89
PRDM16-209ENST00000606170 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.6■□□□□ 0.89
PRDM16-209ENST00000606170 MS4A4AQ96JQ5 239 aa20.6■□□□□ 0.89
PRDM16-209ENST00000606170 TESPA1A2RU30 521 aaPredicted RBP20.59■□□□□ 0.89
PRDM16-209ENST00000606170 APBB1O00213 710 aa20.59■□□□□ 0.89
PRDM16-209ENST00000606170 WDHD1O75717 1129 aaPredicted RBP20.59■□□□□ 0.89
PRDM16-209ENST00000606170 INPP5BP32019 993 aa20.59■□□□□ 0.89
PRDM16-209ENST00000606170 GTF2A2P52657 109 aa20.59■□□□□ 0.89
PRDM16-209ENST00000606170 HSP90AB4PQ58FF6 505 aa20.59■□□□□ 0.89
PRDM16-209ENST00000606170 C20orf194Q5TEA3 1177 aa20.59■□□□□ 0.89
PRDM16-209ENST00000606170 ERO1BQ86YB8 467 aa20.59■□□□□ 0.89
PRDM16-209ENST00000606170 PTPN18Q99952 460 aa20.59■□□□□ 0.89
PRDM16-209ENST00000606170 CFHR5Q9BXR6 569 aa20.59■□□□□ 0.89
PRDM16-209ENST00000606170 CHMP4BQ9H444 224 aaKnown RBP20.59■□□□□ 0.89
PRDM16-209ENST00000606170 DDX4Q9NQI0 724 aaKnown RBP20.59■□□□□ 0.89
PRDM16-209ENST00000606170 AK9Q5TCS8 1911 aa20.59■□□□□ 0.89
PRDM16-209ENST00000606170 CCL15-CCL14A0A0B4J2E2 113 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms