RNA–Protein interactions for RNA: ENST00000602398.2

SBNO1-203, Transcript of strawberry notch homolog 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBNO1, Length 4,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1-203ENST00000602398 FSIP1Q8NA03 581 aa10.44□□□□□ -0.74
SBNO1-203ENST00000602398 TDRD3Q9H7E2 651 aaKnown RBP10.44□□□□□ -0.74
SBNO1-203ENST00000602398 GJB4Q9NTQ9 266 aa10.44□□□□□ -0.74
SBNO1-203ENST00000602398 XDHP47989 1333 aa10.43□□□□□ -0.74
SBNO1-203ENST00000602398 C3orf67Q6ZVT6 689 aa10.43□□□□□ -0.74
SBNO1-203ENST00000602398 CCDC47Q96A33 483 aaKnown RBP10.43□□□□□ -0.74
SBNO1-203ENST00000602398 HAUS7Q99871 368 aa10.43□□□□□ -0.74
SBNO1-203ENST00000602398 H7C1D1 291 aa10.43□□□□□ -0.74
SBNO1-203ENST00000602398 CYP21A2P08686 494 aa10.43□□□□□ -0.74
SBNO1-203ENST00000602398 MCM7P33993 719 aa10.43□□□□□ -0.74
SBNO1-203ENST00000602398 NKX1-1Q15270 411 aaPredicted RBP10.43□□□□□ -0.74
SBNO1-203ENST00000602398 JAKMIP3Q5VZ66 844 aa10.43□□□□□ -0.74
SBNO1-203ENST00000602398 INTS5Q6P9B9 1019 aaKnown RBP10.43□□□□□ -0.74
SBNO1-203ENST00000602398 CCDC174Q6PII3 467 aa10.43□□□□□ -0.74
SBNO1-203ENST00000602398 BMP2KQ9NSY1 1161 aaPredicted RBP10.43□□□□□ -0.74
SBNO1-203ENST00000602398 UBN2Q6ZU65 1347 aa10.43□□□□□ -0.74
SBNO1-203ENST00000602398 BAG4O95429 457 aaKnown RBP10.43□□□□□ -0.74
SBNO1-203ENST00000602398 CYP2E1P05181 493 aaPredicted RBP10.43□□□□□ -0.74
SBNO1-203ENST00000602398 KIF5BP33176 963 aa10.43□□□□□ -0.74
SBNO1-203ENST00000602398 SNAP25P60880 206 aa10.43□□□□□ -0.74
SBNO1-203ENST00000602398 FOXO4P98177 505 aa10.43□□□□□ -0.74
SBNO1-203ENST00000602398 TTC6Q86TZ1 520 aa10.43□□□□□ -0.74
SBNO1-203ENST00000602398 CFAP45Q9UL16 551 aa10.43□□□□□ -0.74
SBNO1-203ENST00000602398 VWDEQ8N2E2 1590 aa10.43□□□□□ -0.74
SBNO1-203ENST00000602398 SRCAPQ6ZRS2 3230 aa10.43□□□□□ -0.74
SBNO1-203ENST00000602398 NRXN1Q9ULB1 1477 aa10.42□□□□□ -0.74
SBNO1-203ENST00000602398 CALM1P0DP23 149 aa10.42□□□□□ -0.74
SBNO1-203ENST00000602398 CALM2P0DP24 149 aa10.42□□□□□ -0.74
SBNO1-203ENST00000602398 CALM3P0DP25 149 aa10.42□□□□□ -0.74
SBNO1-203ENST00000602398 PTMSP20962 102 aa10.42□□□□□ -0.74
SBNO1-203ENST00000602398 SYT1P21579 422 aa10.42□□□□□ -0.74
SBNO1-203ENST00000602398 GRAPQ13588 217 aa10.42□□□□□ -0.74
SBNO1-203ENST00000602398 DALRD3Q5D0E6 543 aaKnown RBP10.42□□□□□ -0.74
SBNO1-203ENST00000602398 POTEAQ6S8J7 498 aa10.42□□□□□ -0.74
SBNO1-203ENST00000602398 JMYQ8N9B5 988 aa10.42□□□□□ -0.74
SBNO1-203ENST00000602398 GRAPLQ8TC17 118 aaPredicted RBP10.42□□□□□ -0.74
SBNO1-203ENST00000602398 STAMQ92783 540 aa10.42□□□□□ -0.74
SBNO1-203ENST00000602398 SIGLEC1Q9BZZ2 1709 aa10.42□□□□□ -0.74
SBNO1-203ENST00000602398 NSMFQ6X4W1 530 aa10.42□□□□□ -0.74
SBNO1-203ENST00000602398 KIFC2Q96AC6 838 aa10.42□□□□□ -0.74
SBNO1-203ENST00000602398 SCLT1Q96NL6 688 aa10.42□□□□□ -0.74
SBNO1-203ENST00000602398 ISCA1Q9BUE6 129 aa10.42□□□□□ -0.74
SBNO1-203ENST00000602398 VPS54Q9P1Q0 977 aa10.42□□□□□ -0.74
SBNO1-203ENST00000602398 MAST3O60307 1309 aa10.42□□□□□ -0.74
SBNO1-203ENST00000602398 SLC1A4P43007 532 aa10.42□□□□□ -0.74
SBNO1-203ENST00000602398 GPSM2P81274 684 aa10.42□□□□□ -0.74
SBNO1-203ENST00000602398 MECOMQ03112 1051 aa10.42□□□□□ -0.74
SBNO1-203ENST00000602398 PAGR1Q9BTK6 254 aa10.42□□□□□ -0.74
SBNO1-203ENST00000602398 NUP62CLQ9H1M0 184 aa10.42□□□□□ -0.74
SBNO1-203ENST00000602398 HOOK1Q9UJC3 728 aaKnown RBP10.42□□□□□ -0.74
SBNO1-203ENST00000602398 SLC16A2P36021 539 aa10.42□□□□□ -0.74
SBNO1-203ENST00000602398 PPARAQ07869 468 aa10.42□□□□□ -0.74
SBNO1-203ENST00000602398 ZNF174Q15697 407 aa10.42□□□□□ -0.74
SBNO1-203ENST00000602398 GPIHBP1Q8IV16 184 aa10.42□□□□□ -0.74
SBNO1-203ENST00000602398 LRRC4BQ9NT99 713 aa10.42□□□□□ -0.74
SBNO1-203ENST00000602398 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.42□□□□□ -0.74
SBNO1-203ENST00000602398 CHMP2AO43633 222 aa10.41□□□□□ -0.74
SBNO1-203ENST00000602398 ATP2B4P23634 1241 aa10.41□□□□□ -0.74
SBNO1-203ENST00000602398 EPS15P42566 896 aa10.41□□□□□ -0.74
SBNO1-203ENST00000602398 MATR3P43243 847 aaKnown RBP eCLIP10.41□□□□□ -0.74
SBNO1-203ENST00000602398 RAD51AP2Q09MP3 1159 aa10.41□□□□□ -0.74
SBNO1-203ENST00000602398 LETM2Q2VYF4 491 aa10.41□□□□□ -0.74
SBNO1-203ENST00000602398 CCDC84Q86UT8 332 aaPredicted RBP10.41□□□□□ -0.74
SBNO1-203ENST00000602398 TXNRD3Q86VQ6 643 aa10.41□□□□□ -0.74
SBNO1-203ENST00000602398 CLEC10AQ8IUN9 316 aa10.41□□□□□ -0.74
SBNO1-203ENST00000602398 CSRNP1Q96S65 589 aa10.41□□□□□ -0.74
SBNO1-203ENST00000602398 HELLSQ9NRZ9 838 aa10.41□□□□□ -0.74
SBNO1-203ENST00000602398 FAM13BQ9NYF5 915 aa10.41□□□□□ -0.74
SBNO1-203ENST00000602398 GINS2Q9Y248 185 aa10.41□□□□□ -0.74
SBNO1-203ENST00000602398 RAD50Q92878 1312 aa10.41□□□□□ -0.74
SBNO1-203ENST00000602398 DDX39AO00148 427 aaKnown RBP10.41□□□□□ -0.74
SBNO1-203ENST00000602398 SERPINC1P01008 464 aa10.41□□□□□ -0.74
SBNO1-203ENST00000602398 NAP1L1P55209 391 aaKnown RBP10.41□□□□□ -0.74
SBNO1-203ENST00000602398 UBE4AQ14139 1066 aa10.41□□□□□ -0.74
SBNO1-203ENST00000602398 ME3Q16798 604 aa10.41□□□□□ -0.74
SBNO1-203ENST00000602398 PDGFDQ9GZP0 370 aaPredicted RBP10.41□□□□□ -0.74
SBNO1-203ENST00000602398 NCOA3Q9Y6Q9 1424 aa10.41□□□□□ -0.74
SBNO1-203ENST00000602398 ZC3H13Q5T200 1668 aaKnown RBP10.41□□□□□ -0.74
SBNO1-203ENST00000602398 BBOX1O75936 387 aa10.41□□□□□ -0.74
SBNO1-203ENST00000602398 RPS6KB1P23443 525 aa10.41□□□□□ -0.74
SBNO1-203ENST00000602398 HMGN5P82970 282 aaKnown RBP10.41□□□□□ -0.74
SBNO1-203ENST00000602398 TSR1Q2NL82 804 aaKnown RBP10.41□□□□□ -0.74
SBNO1-203ENST00000602398 CLEC4GQ6UXB4 293 aa10.41□□□□□ -0.74
SBNO1-203ENST00000602398 USP17L3A6NCW0 530 aa10.4□□□□□ -0.74
SBNO1-203ENST00000602398 USP17L4A6NCW7 530 aa10.4□□□□□ -0.74
SBNO1-203ENST00000602398 NMT2O60551 498 aa10.4□□□□□ -0.74
SBNO1-203ENST00000602398 UBXN2AP68543 259 aa10.4□□□□□ -0.74
SBNO1-203ENST00000602398 USP17L1Q7RTZ2 530 aa10.4□□□□□ -0.74
SBNO1-203ENST00000602398 PI4K2BQ8TCG2 481 aa10.4□□□□□ -0.74
SBNO1-203ENST00000602398 WASF1Q92558 559 aa10.4□□□□□ -0.74
SBNO1-203ENST00000602398 GPKOWQ92917 476 aaPredicted RBP eCLIP10.4□□□□□ -0.742e-6■■□□□ 12.5
SBNO1-203ENST00000602398 CNNM2Q9H8M5 875 aa10.4□□□□□ -0.74
SBNO1-203ENST00000602398 PIM2Q9P1W9 311 aa10.4□□□□□ -0.74
SBNO1-203ENST00000602398 ANGEL1Q9UNK9 670 aaKnown RBP10.4□□□□□ -0.74
SBNO1-203ENST00000602398 OVOS2A0A0G2JMS6 1433 aa10.4□□□□□ -0.74
SBNO1-203ENST00000602398 CFBP00751 764 aa10.4□□□□□ -0.74
SBNO1-203ENST00000602398 PLCG2P16885 1265 aa10.4□□□□□ -0.74
SBNO1-203ENST00000602398 MAEAQ7L5Y9 396 aa10.4□□□□□ -0.74
SBNO1-203ENST00000602398 MAP2P11137 1827 aaKnown RBP10.4□□□□□ -0.74
SBNO1-203ENST00000602398 DPY19L2Q6NUT2 758 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms