RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 JDP2Q8WYK2 163 aa20.85■□□□□ 0.93
DDX49-213ENST00000602113 DAGLAQ9Y4D2 1042 aa20.85■□□□□ 0.93
DDX49-213ENST00000602113 MYH2Q9UKX2 1941 aa20.85■□□□□ 0.93
DDX49-213ENST00000602113 YBX3P16989 372 aaKnown RBP eCLIP20.84■□□□□ 0.932e-6■□□□□ 8.6
DDX49-213ENST00000602113 BTDP43251 543 aa20.84■□□□□ 0.93
DDX49-213ENST00000602113 CXCL9Q07325 125 aa20.84■□□□□ 0.93
DDX49-213ENST00000602113 RSBN1LQ6PCB5 846 aaPredicted RBP20.84■□□□□ 0.93
DDX49-213ENST00000602113 SH3RF3Q8TEJ3 882 aaPredicted RBP20.84■□□□□ 0.93
DDX49-213ENST00000602113 RPAP1Q9BWH6 1393 aaPredicted RBP20.84■□□□□ 0.93
DDX49-213ENST00000602113 BAG3O95817 575 aa20.83■□□□□ 0.93
DDX49-213ENST00000602113 CRNKL1Q9BZJ0 848 aaKnown RBP20.83■□□□□ 0.93
DDX49-213ENST00000602113 ZMYM6O95789 1325 aa20.83■□□□□ 0.93
DDX49-213ENST00000602113 GMLQ99445 158 aa20.83■□□□□ 0.92
DDX49-213ENST00000602113 NOL10Q9BSC4 688 aaKnown RBP20.83■□□□□ 0.92
DDX49-213ENST00000602113 HAND2P61296 217 aa20.82■□□□□ 0.92
DDX49-213ENST00000602113 COL9A3Q14050 684 aaPredicted RBP20.82■□□□□ 0.92
DDX49-213ENST00000602113 HHIPL2Q6UWX4 724 aa20.82■□□□□ 0.92
DDX49-213ENST00000602113 STOX1Q6ZVD7 989 aa20.82■□□□□ 0.92
DDX49-213ENST00000602113 TEKT1Q969V4 418 aa20.82■□□□□ 0.92
DDX49-213ENST00000602113 JAKMIP1Q96N16 626 aaKnown RBP20.82■□□□□ 0.92
DDX49-213ENST00000602113 MRIQ9BWK5 157 aa20.82■□□□□ 0.92
DDX49-213ENST00000602113 UPF3BQ9BZI7 483 aaKnown RBP20.82■□□□□ 0.92
DDX49-213ENST00000602113 NACAP1Q9BZK3 213 aa20.82■□□□□ 0.92
DDX49-213ENST00000602113 NAPBQ9H115 298 aa20.82■□□□□ 0.92
DDX49-213ENST00000602113 CD2BP2O95400 341 aaKnown RBP20.81■□□□□ 0.92
DDX49-213ENST00000602113 CRKP46108 304 aa20.81■□□□□ 0.92
DDX49-213ENST00000602113 RHBDL3P58872 404 aa20.81■□□□□ 0.92
DDX49-213ENST00000602113 IMMTQ16891 758 aaKnown RBP20.81■□□□□ 0.92
DDX49-213ENST00000602113 DDRGK1Q96HY6 314 aa20.81■□□□□ 0.92
DDX49-213ENST00000602113 NBPF3Q9H094 633 aa20.81■□□□□ 0.92
DDX49-213ENST00000602113 ADAMTSL1Q8N6G6 1762 aa20.81■□□□□ 0.92
DDX49-213ENST00000602113 MYO3BQ8WXR4 1341 aa20.81■□□□□ 0.92
DDX49-213ENST00000602113 TDO2P48775 406 aa20.8■□□□□ 0.92
DDX49-213ENST00000602113 HDLBPQ00341 1268 aaKnown RBP20.8■□□□□ 0.92
DDX49-213ENST00000602113 CIAPIN1Q6FI81 312 aa20.8■□□□□ 0.92
DDX49-213ENST00000602113 TM6SF1Q9BZW5 370 aa20.8■□□□□ 0.92
DDX49-213ENST00000602113 ZBTB12Q9Y330 459 aaPredicted RBP20.8■□□□□ 0.92
DDX49-213ENST00000602113 FZD9O00144 591 aa20.8■□□□□ 0.92
DDX49-213ENST00000602113 ZNF213O14771 459 aa20.8■□□□□ 0.92
DDX49-213ENST00000602113 CPA1P15085 419 aa20.8■□□□□ 0.92
DDX49-213ENST00000602113 NEK4P51957 841 aa20.8■□□□□ 0.92
DDX49-213ENST00000602113 APOBEC3HQ6NTF7 200 aaKnown RBP20.8■□□□□ 0.92
DDX49-213ENST00000602113 GIMAP6Q6P9H5 292 aa20.8■□□□□ 0.92
DDX49-213ENST00000602113 CERS3Q8IU89 383 aa20.8■□□□□ 0.92
DDX49-213ENST00000602113 IPO9Q96P70 1041 aaKnown RBP20.8■□□□□ 0.92
DDX49-213ENST00000602113 ZSWIM6Q9HCJ5 1215 aa20.8■□□□□ 0.92
DDX49-213ENST00000602113 DCP1AQ9NPI6 582 aaPredicted RBP20.8■□□□□ 0.92
DDX49-213ENST00000602113 PCDHAC2Q9Y5I4 1007 aa20.8■□□□□ 0.92
DDX49-213ENST00000602113 SRCAPQ6ZRS2 3230 aa20.79■□□□□ 0.92
DDX49-213ENST00000602113 E7EWF7 191 aa20.79■□□□□ 0.92
DDX49-213ENST00000602113 CASTP20810 708 aaKnown RBP20.79■□□□□ 0.92
DDX49-213ENST00000602113 KRT32Q14532 448 aa20.79■□□□□ 0.92
DDX49-213ENST00000602113 ZDHHC15Q96MV8 337 aa20.79■□□□□ 0.92
DDX49-213ENST00000602113 TBC1D2Q9BYX2 928 aa20.79■□□□□ 0.92
DDX49-213ENST00000602113 ATP8A2Q9NTI2 1148 aa20.79■□□□□ 0.92
DDX49-213ENST00000602113 MKRN1Q9UHC7 482 aaKnown RBP20.79■□□□□ 0.92
DDX49-213ENST00000602113 SERPINA10Q9UK55 444 aa20.79■□□□□ 0.92
DDX49-213ENST00000602113 PLCG2P16885 1265 aa20.78■□□□□ 0.92
DDX49-213ENST00000602113 LMNB1P20700 586 aa20.78■□□□□ 0.92
DDX49-213ENST00000602113 SNX21Q969T3 373 aa20.78■□□□□ 0.92
DDX49-213ENST00000602113 TNIP1Q15025 636 aa20.77■□□□□ 0.92
DDX49-213ENST00000602113 TBC1D10CQ8IV04 446 aa20.77■□□□□ 0.92
DDX49-213ENST00000602113 TEX11Q8IYF3 940 aa20.77■□□□□ 0.92
DDX49-213ENST00000602113 AGBL3Q8NEM8 1001 aa20.77■□□□□ 0.92
DDX49-213ENST00000602113 TGFBRAP1Q8WUH2 860 aa20.77■□□□□ 0.92
DDX49-213ENST00000602113 PSMA5P28066 241 aa20.77■□□□□ 0.91
DDX49-213ENST00000602113 USP5P45974 858 aa20.77■□□□□ 0.91
DDX49-213ENST00000602113 CDC42EP5Q6NZY7 148 aa20.77■□□□□ 0.91
DDX49-213ENST00000602113 CTR9Q6PD62 1173 aa20.77■□□□□ 0.91
DDX49-213ENST00000602113 NEK1Q96PY6 1258 aa20.77■□□□□ 0.91
DDX49-213ENST00000602113 TACC3Q9Y6A5 838 aa20.77■□□□□ 0.91
DDX49-213ENST00000602113 LAMA4Q16363 1823 aa20.76■□□□□ 0.91
DDX49-213ENST00000602113 CYP2D7A0A087X1C5 515 aa20.76■□□□□ 0.91
DDX49-213ENST00000602113 SMIM22K7EJ46 135 aa20.76■□□□□ 0.91
DDX49-213ENST00000602113 CTDSPL2Q05D32 466 aa20.76■□□□□ 0.91
DDX49-213ENST00000602113 RUFY3Q7L099 469 aa20.76■□□□□ 0.91
DDX49-213ENST00000602113 TTC14Q96N46 770 aa20.76■□□□□ 0.91
DDX49-213ENST00000602113 USP40Q9NVE5 1235 aa20.76■□□□□ 0.91
DDX49-213ENST00000602113 CYP46A1Q9Y6A2 500 aa20.76■□□□□ 0.91
DDX49-213ENST00000602113 ZNF541Q9H0D2 1346 aa20.75■□□□□ 0.91
DDX49-213ENST00000602113 USP17L12C9JPN9 530 aa20.75■□□□□ 0.91
DDX49-213ENST00000602113 USP17L21D6R901 530 aa20.75■□□□□ 0.91
DDX49-213ENST00000602113 ST18O60284 1047 aa20.75■□□□□ 0.91
DDX49-213ENST00000602113 RBM5P52756 815 aaKnown RBP eCLIP20.75■□□□□ 0.91
DDX49-213ENST00000602113 EIF6P56537 245 aaKnown RBP20.75■□□□□ 0.91
DDX49-213ENST00000602113 PPARAQ07869 468 aa20.75■□□□□ 0.91
DDX49-213ENST00000602113 CFAP100Q494V2 611 aa20.75■□□□□ 0.91
DDX49-213ENST00000602113 MAPKAPK5Q8IW41 473 aa20.75■□□□□ 0.91
DDX49-213ENST00000602113 MINDY4BA8MYZ0 360 aa20.74■□□□□ 0.91
DDX49-213ENST00000602113 USP17L8P0C7I0 530 aa20.74■□□□□ 0.91
DDX49-213ENST00000602113 CYP2D6P10635 497 aa20.74■□□□□ 0.91
DDX49-213ENST00000602113 SLC4A3P48751 1232 aa20.74■□□□□ 0.91
DDX49-213ENST00000602113 EVX2Q03828 476 aa20.74■□□□□ 0.91
DDX49-213ENST00000602113 BLOC1S2Q6QNY1 142 aa20.74■□□□□ 0.91
DDX49-213ENST00000602113 ANAPC4Q9UJX5 808 aa20.74■□□□□ 0.91
DDX49-213ENST00000602113 BAZ2AQ9UIF9 1905 aaKnown RBP20.74■□□□□ 0.91
DDX49-213ENST00000602113 WDHD1O75717 1129 aaPredicted RBP20.73■□□□□ 0.91
DDX49-213ENST00000602113 RPS6KB1P23443 525 aa20.73■□□□□ 0.91
DDX49-213ENST00000602113 BECN1Q14457 450 aa20.73■□□□□ 0.91
DDX49-213ENST00000602113 SBK1Q52WX2 424 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms