RNA–Protein interactions for RNA: ENST00000601393.1

SNRPA-210, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-210ENST00000601393 MROH7-TTC4A0A0A0MT08 1334 aa20.56■□□□□ 0.88
SNRPA-210ENST00000601393 APBB1O00213 710 aa20.56■□□□□ 0.88
SNRPA-210ENST00000601393 ZAP70P43403 619 aa20.56■□□□□ 0.88
SNRPA-210ENST00000601393 LDLRAD1Q5T700 205 aa20.56■□□□□ 0.88
SNRPA-210ENST00000601393 TMEM39BQ9GZU3 492 aa20.56■□□□□ 0.88
SNRPA-210ENST00000601393 UBE2Q2LH0YL09 131 aa20.55■□□□□ 0.88
SNRPA-210ENST00000601393 AOC2O75106 756 aa20.55■□□□□ 0.88
SNRPA-210ENST00000601393 SLC10A3P09131 477 aa20.55■□□□□ 0.88
SNRPA-210ENST00000601393 HSPA1AP0DMV8 641 aaKnown RBP20.55■□□□□ 0.88
SNRPA-210ENST00000601393 HSPA1BP0DMV9 641 aaKnown RBP20.55■□□□□ 0.88
SNRPA-210ENST00000601393 PAXIP1Q6ZW49 1069 aaPredicted RBP20.55■□□□□ 0.88
SNRPA-210ENST00000601393 FZD1Q9UP38 647 aa20.55■□□□□ 0.88
SNRPA-210ENST00000601393 GPR75-ASB3A0A0A6YYF3 556 aa20.54■□□□□ 0.88
SNRPA-210ENST00000601393 IGSF3O75054 1194 aa20.54■□□□□ 0.88
SNRPA-210ENST00000601393 MAP2K2P36507 400 aa20.54■□□□□ 0.88
SNRPA-210ENST00000601393 TNNI2P48788 182 aa20.54■□□□□ 0.88
SNRPA-210ENST00000601393 NFIAQ12857 509 aa20.54■□□□□ 0.88
SNRPA-210ENST00000601393 SUPT20HL1Q3ZLR7 823 aa20.54■□□□□ 0.88
SNRPA-210ENST00000601393 RASAL3Q86YV0 1011 aa20.54■□□□□ 0.88
SNRPA-210ENST00000601393 SLF2Q8IX21 1173 aa20.54■□□□□ 0.88
SNRPA-210ENST00000601393 ZIC5Q96T25 663 aa20.54■□□□□ 0.88
SNRPA-210ENST00000601393 PIH1D3Q9NQM4 214 aaKnown RBP20.54■□□□□ 0.88
SNRPA-210ENST00000601393 WBP1LQ9NX94 342 aa20.54■□□□□ 0.88
SNRPA-210ENST00000601393 TMOD2Q9NZR1 351 aa20.54■□□□□ 0.88
SNRPA-210ENST00000601393 MYH7P12883 1935 aa20.53■□□□□ 0.88
SNRPA-210ENST00000601393 AK9Q5TCS8 1911 aa20.53■□□□□ 0.88
SNRPA-210ENST00000601393 ZNF157P51786 506 aaPredicted RBP20.53■□□□□ 0.88
SNRPA-210ENST00000601393 RHBDL3P58872 404 aa20.53■□□□□ 0.88
SNRPA-210ENST00000601393 NOGQ13253 232 aa20.53■□□□□ 0.88
SNRPA-210ENST00000601393 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.53■□□□□ 0.88
SNRPA-210ENST00000601393 CCDC102AQ96A19 550 aa20.53■□□□□ 0.88
SNRPA-210ENST00000601393 IDI2Q9BXS1 227 aa20.53■□□□□ 0.88
SNRPA-210ENST00000601393 LRRCC1Q9C099 1032 aa20.53■□□□□ 0.88
SNRPA-210ENST00000601393 FAM198AQ9UFP1 575 aa20.53■□□□□ 0.88
SNRPA-210ENST00000601393 GRM1Q13255 1194 aa20.52■□□□□ 0.88
SNRPA-210ENST00000601393 PRKG1Q13976 671 aa20.52■□□□□ 0.88
SNRPA-210ENST00000601393 ARMC9Q7Z3E5 817 aa20.52■□□□□ 0.88
SNRPA-210ENST00000601393 FAM151AQ8WW52 585 aa20.52■□□□□ 0.88
SNRPA-210ENST00000601393 USP40Q9NVE5 1235 aa20.52■□□□□ 0.88
SNRPA-210ENST00000601393 RAI14Q9P0K7 980 aa20.52■□□□□ 0.88
SNRPA-210ENST00000601393 ANGEL1Q9UNK9 670 aaKnown RBP20.52■□□□□ 0.88
SNRPA-210ENST00000601393 NDUFB9Q9Y6M9 179 aa20.52■□□□□ 0.88
SNRPA-210ENST00000601393 SMARCA5O60264 1052 aaPredicted RBP20.51■□□□□ 0.87
SNRPA-210ENST00000601393 USP2O75604 605 aaPredicted RBP20.51■□□□□ 0.87
SNRPA-210ENST00000601393 WDHD1O75717 1129 aaPredicted RBP20.51■□□□□ 0.87
SNRPA-210ENST00000601393 IFIT2P09913 472 aaKnown RBP20.51■□□□□ 0.87
SNRPA-210ENST00000601393 BTDP43251 543 aa20.51■□□□□ 0.87
SNRPA-210ENST00000601393 GSTO1P78417 241 aa20.51■□□□□ 0.87
SNRPA-210ENST00000601393 TTLL12Q14166 644 aaPredicted RBP20.51■□□□□ 0.87
SNRPA-210ENST00000601393 ANTXR1Q9H6X2 564 aa20.51■□□□□ 0.87
SNRPA-210ENST00000601393 LRP2BPQ9P2M1 347 aa20.51■□□□□ 0.87
SNRPA-210ENST00000601393 ATRNL1Q5VV63 1379 aa20.5■□□□□ 0.87
SNRPA-210ENST00000601393 UNCXA6NJT0 531 aa20.5■□□□□ 0.87
SNRPA-210ENST00000601393 PPP1R12BO60237 982 aaPredicted RBP20.5■□□□□ 0.87
SNRPA-210ENST00000601393 LDHCP07864 332 aa20.5■□□□□ 0.87
SNRPA-210ENST00000601393 AAMPQ13685 434 aa20.5■□□□□ 0.87
SNRPA-210ENST00000601393 ADGRA1Q86SQ6 560 aa20.5■□□□□ 0.87
SNRPA-210ENST00000601393 SIPA1L1O43166 1804 aa20.5■□□□□ 0.87
SNRPA-210ENST00000601393 MAP2K1Q02750 393 aaPredicted RBP20.49■□□□□ 0.87
SNRPA-210ENST00000601393 SUPT16HQ9Y5B9 1047 aaKnown RBP20.49■□□□□ 0.87
SNRPA-210ENST00000601393 ENTPD3O75355 529 aa20.48■□□□□ 0.87
SNRPA-210ENST00000601393 NPM3O75607 178 aaKnown RBP20.48■□□□□ 0.87
SNRPA-210ENST00000601393 MAP4K4O95819 1239 aaPredicted RBP20.48■□□□□ 0.87
SNRPA-210ENST00000601393 RGS3P49796 1198 aa20.48■□□□□ 0.87
SNRPA-210ENST00000601393 NAA16Q6N069 864 aaPredicted RBP20.48■□□□□ 0.87
SNRPA-210ENST00000601393 ZFPM1Q8IX07 1006 aa20.48■□□□□ 0.87
SNRPA-210ENST00000601393 CLMNQ96JQ2 1002 aa20.48■□□□□ 0.87
SNRPA-210ENST00000601393 DDX4Q9NQI0 724 aaKnown RBP20.48■□□□□ 0.87
SNRPA-210ENST00000601393 COL2A1P02458 1487 aaPredicted RBP20.48■□□□□ 0.87
SNRPA-210ENST00000601393 FOXN1O15353 648 aa20.47■□□□□ 0.87
SNRPA-210ENST00000601393 ATP5JP18859 108 aa20.47■□□□□ 0.87
SNRPA-210ENST00000601393 KIF23Q02241 960 aaPredicted RBP20.47■□□□□ 0.87
SNRPA-210ENST00000601393 TCP10Q12799 353 aa20.47■□□□□ 0.87
SNRPA-210ENST00000601393 HDAC1Q13547 482 aaPredicted RBP20.47■□□□□ 0.87
SNRPA-210ENST00000601393 SH3BP5LQ7L8J4 393 aa20.47■□□□□ 0.87
SNRPA-210ENST00000601393 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.47■□□□□ 0.873e-7■□□□□ 8
SNRPA-210ENST00000601393 EXOC6Q8TAG9 804 aa20.47■□□□□ 0.87
SNRPA-210ENST00000601393 DDX60LQ5H9U9 1706 aaKnown RBP20.47■□□□□ 0.87
SNRPA-210ENST00000601393 IREB2P48200 963 aaKnown RBP20.46■□□□□ 0.87
SNRPA-210ENST00000601393 PPP4CP60510 307 aa20.46■□□□□ 0.87
SNRPA-210ENST00000601393 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.46■□□□□ 0.87
SNRPA-210ENST00000601393 TMED8Q6PL24 325 aaPredicted RBP20.45■□□□□ 0.86
SNRPA-210ENST00000601393 ANKRD13AQ8IZ07 590 aa20.45■□□□□ 0.86
SNRPA-210ENST00000601393 IDH1O75874 414 aaKnown RBP20.44■□□□□ 0.86
SNRPA-210ENST00000601393 SPRYD7Q5W111 196 aa20.44■□□□□ 0.86
SNRPA-210ENST00000601393 HOOK2Q96ED9 719 aa20.44■□□□□ 0.86
SNRPA-210ENST00000601393 EDC3Q96F86 508 aaKnown RBP20.44■□□□□ 0.86
SNRPA-210ENST00000601393 CSRNP1Q96S65 589 aa20.44■□□□□ 0.86
SNRPA-210ENST00000601393 HAUS7Q99871 368 aa20.44■□□□□ 0.86
SNRPA-210ENST00000601393 MYH1P12882 1939 aa20.44■□□□□ 0.86
SNRPA-210ENST00000601393 DDTLA6NHG4 134 aaPredicted RBP20.43■□□□□ 0.86
SNRPA-210ENST00000601393 MAP3K10Q02779 954 aa20.43■□□□□ 0.86
SNRPA-210ENST00000601393 TTF1Q15361 905 aaPredicted RBP20.43■□□□□ 0.86
SNRPA-210ENST00000601393 SH3RF3Q8TEJ3 882 aaPredicted RBP20.43■□□□□ 0.86
SNRPA-210ENST00000601393 WNK4Q96J92 1243 aa20.43■□□□□ 0.86
SNRPA-210ENST00000601393 AATFQ9NY61 560 aaKnown RBP eCLIP20.43■□□□□ 0.865e-6■□□□□ 8.9
SNRPA-210ENST00000601393 ZNF112Q9UJU3 913 aa20.43■□□□□ 0.86
SNRPA-210ENST00000601393 SALL3Q9BXA9 1300 aa20.43■□□□□ 0.86
SNRPA-210ENST00000601393 DOCK1Q14185 1865 aa20.43■□□□□ 0.86
SNRPA-210ENST00000601393 NAV1Q8NEY1 1877 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms