RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 DIXDC1Q155Q3 683 aa21.11■□□□□ 0.97
SCAF1-204ENST00000601038 CCL15Q16663 113 aa21.11■□□□□ 0.97
SCAF1-204ENST00000601038 CDC42EP5Q6NZY7 148 aa21.11■□□□□ 0.97
SCAF1-204ENST00000601038 ERO1BQ86YB8 467 aa21.11■□□□□ 0.97
SCAF1-204ENST00000601038 FAM151AQ8WW52 585 aa21.11■□□□□ 0.97
SCAF1-204ENST00000601038 SNCAIPQ9Y6H5 919 aa21.11■□□□□ 0.97
SCAF1-204ENST00000601038 MTX1Q13505 466 aa21.1■□□□□ 0.97
SCAF1-204ENST00000601038 CCDC102BQ68D86 513 aa21.1■□□□□ 0.97
SCAF1-204ENST00000601038 ZKSCAN4Q969J2 545 aaPredicted RBP21.1■□□□□ 0.97
SCAF1-204ENST00000601038 SRGAP3O43295 1099 aa21.09■□□□□ 0.97
SCAF1-204ENST00000601038 MIGA2Q7L4E1 593 aa21.09■□□□□ 0.97
SCAF1-204ENST00000601038 ZGPATQ8N5A5 531 aaKnown RBP21.09■□□□□ 0.97
SCAF1-204ENST00000601038 CD99L2Q8TCZ2 262 aa21.09■□□□□ 0.97
SCAF1-204ENST00000601038 ZNF341Q9BYN7 854 aa21.09■□□□□ 0.97
SCAF1-204ENST00000601038 ZFYVE28Q9HCC9 887 aa21.09■□□□□ 0.97
SCAF1-204ENST00000601038 CETPP11597 493 aa21.08■□□□□ 0.97
SCAF1-204ENST00000601038 ADORA1P30542 326 aa21.08■□□□□ 0.97
SCAF1-204ENST00000601038 TIMM10P62072 90 aa21.08■□□□□ 0.97
SCAF1-204ENST00000601038 TCP10Q12799 353 aa21.08■□□□□ 0.97
SCAF1-204ENST00000601038 TAF1CQ15572 869 aaPredicted RBP21.08■□□□□ 0.97
SCAF1-204ENST00000601038 FAM43AQ8N2R8 423 aa21.08■□□□□ 0.97
SCAF1-204ENST00000601038 EFCC1Q9HA90 598 aa21.08■□□□□ 0.97
SCAF1-204ENST00000601038 USP40Q9NVE5 1235 aa21.08■□□□□ 0.97
SCAF1-204ENST00000601038 AKAP2Q9Y2D5 859 aa21.08■□□□□ 0.97
SCAF1-204ENST00000601038 PTPN22Q9Y2R2 807 aa21.08■□□□□ 0.97
SCAF1-204ENST00000601038 IRF6O14896 467 aa21.07■□□□□ 0.96
SCAF1-204ENST00000601038 TRIM27P14373 513 aa21.07■□□□□ 0.96
SCAF1-204ENST00000601038 NFIAQ12857 509 aa21.07■□□□□ 0.96
SCAF1-204ENST00000601038 PPIL2Q13356 520 aa21.07■□□□□ 0.96
SCAF1-204ENST00000601038 SNAPC2Q13487 334 aa21.07■□□□□ 0.96
SCAF1-204ENST00000601038 PDS5AQ29RF7 1337 aaKnown RBP21.06■□□□□ 0.96
SCAF1-204ENST00000601038 PPATQ06203 517 aa21.06■□□□□ 0.96
SCAF1-204ENST00000601038 ATF7IPQ6VMQ6 1270 aa21.06■□□□□ 0.96
SCAF1-204ENST00000601038 ZCCHC17Q9NP64 241 aaKnown RBP21.06■□□□□ 0.96
SCAF1-204ENST00000601038 FAM198AQ9UFP1 575 aa21.06■□□□□ 0.96
SCAF1-204ENST00000601038 ZNF112Q9UJU3 913 aa21.06■□□□□ 0.96
SCAF1-204ENST00000601038 A0A1B0GUL7 405 aa21.05■□□□□ 0.96
SCAF1-204ENST00000601038 WDHD1O75717 1129 aaPredicted RBP21.05■□□□□ 0.96
SCAF1-204ENST00000601038 BCAR3O75815 825 aa21.05■□□□□ 0.96
SCAF1-204ENST00000601038 INPP5BP32019 993 aa21.05■□□□□ 0.96
SCAF1-204ENST00000601038 TFCP2Q12800 502 aa21.05■□□□□ 0.96
SCAF1-204ENST00000601038 RASGRF1Q13972 1273 aa21.05■□□□□ 0.96
SCAF1-204ENST00000601038 ARHGEF6Q15052 776 aa21.05■□□□□ 0.96
SCAF1-204ENST00000601038 XAGE2Q96GT9 111 aa21.05■□□□□ 0.96
SCAF1-204ENST00000601038 PDE4DIPQ5VU43 2346 aa21.05■□□□□ 0.96
SCAF1-204ENST00000601038 BTBD19C9JJ37 291 aa21.04■□□□□ 0.96
SCAF1-204ENST00000601038 CAP1Q01518 475 aa21.04■□□□□ 0.96
SCAF1-204ENST00000601038 FRAT1Q92837 279 aaPredicted RBP21.04■□□□□ 0.96
SCAF1-204ENST00000601038 AK9Q5TCS8 1911 aa21.04■□□□□ 0.96
SCAF1-204ENST00000601038 GAKO14976 1311 aa21.04■□□□□ 0.96
SCAF1-204ENST00000601038 TLR2O60603 784 aa21.03■□□□□ 0.96
SCAF1-204ENST00000601038 GNAI2P04899 355 aa21.03■□□□□ 0.96
SCAF1-204ENST00000601038 MVPQ14764 893 aaKnown RBP21.03■□□□□ 0.96
SCAF1-204ENST00000601038 SPTY2D1Q68D10 685 aaPredicted RBP21.03■□□□□ 0.96
SCAF1-204ENST00000601038 DZIP1Q86YF9 867 aaKnown RBP21.03■□□□□ 0.96
SCAF1-204ENST00000601038 SLF2Q8IX21 1173 aa21.03■□□□□ 0.96
SCAF1-204ENST00000601038 FAM163AQ96GL9 167 aaPredicted RBP21.03■□□□□ 0.96
SCAF1-204ENST00000601038 IDI2Q9BXS1 227 aa21.03■□□□□ 0.96
SCAF1-204ENST00000601038 ABCF2Q9UG63 623 aa21.03■□□□□ 0.96
SCAF1-204ENST00000601038 ENTPD3O75355 529 aa21.02■□□□□ 0.96
SCAF1-204ENST00000601038 ZFPM1Q8IX07 1006 aa21.02■□□□□ 0.96
SCAF1-204ENST00000601038 TNNQ9UQP3 1299 aa21.02■□□□□ 0.96
SCAF1-204ENST00000601038 NOL9Q5SY16 702 aaKnown RBP21.01■□□□□ 0.95
SCAF1-204ENST00000601038 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.01■□□□□ 0.95
SCAF1-204ENST00000601038 CLUAP1Q96AJ1 413 aa21.01■□□□□ 0.95
SCAF1-204ENST00000601038 ARMC5Q96C12 935 aa21.01■□□□□ 0.95
SCAF1-204ENST00000601038 NEUROD6Q96NK8 337 aa21.01■□□□□ 0.95
SCAF1-204ENST00000601038 KCNH4Q9UQ05 1017 aa21.01■□□□□ 0.95
SCAF1-204ENST00000601038 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.01■□□□□ 0.95
SCAF1-204ENST00000601038 MYH2Q9UKX2 1941 aa21.01■□□□□ 0.95
SCAF1-204ENST00000601038 RGS3P49796 1198 aa21■□□□□ 0.95
SCAF1-204ENST00000601038 PNMA6EA0A0J9YXQ4 647 aa20.99■□□□□ 0.95
SCAF1-204ENST00000601038 SLC34A2O95436 690 aa20.99■□□□□ 0.95
SCAF1-204ENST00000601038 G3BP1Q13283 466 aaKnown RBP eCLIP20.99■□□□□ 0.95
SCAF1-204ENST00000601038 ZKSCAN2Q63HK3 967 aa20.99■□□□□ 0.95
SCAF1-204ENST00000601038 ERICH6Q7L0X2 663 aa20.99■□□□□ 0.95
SCAF1-204ENST00000601038 ANKRD23Q86SG2 305 aa20.99■□□□□ 0.95
SCAF1-204ENST00000601038 TNRC18O15417 2968 aaPredicted RBP20.99■□□□□ 0.95
SCAF1-204ENST00000601038 BTDP43251 543 aa20.98■□□□□ 0.95
SCAF1-204ENST00000601038 LACTBP83111 547 aaPredicted RBP20.98■□□□□ 0.95
SCAF1-204ENST00000601038 KIF22Q14807 665 aa20.98■□□□□ 0.95
SCAF1-204ENST00000601038 GORABQ5T7V8 394 aa20.98■□□□□ 0.95
SCAF1-204ENST00000601038 PRPF38BQ5VTL8 546 aaKnown RBP20.98■□□□□ 0.95
SCAF1-204ENST00000601038 HMG20BQ9P0W2 317 aa20.98■□□□□ 0.95
SCAF1-204ENST00000601038 RFX7Q2KHR2 1363 aa20.97■□□□□ 0.95
SCAF1-204ENST00000601038 ATRNL1Q5VV63 1379 aa20.97■□□□□ 0.95
SCAF1-204ENST00000601038 GPR75-ASB3A0A0A6YYF3 556 aa20.97■□□□□ 0.95
SCAF1-204ENST00000601038 POTEFA5A3E0 1075 aa20.97■□□□□ 0.95
SCAF1-204ENST00000601038 PHF20L1A8MW92 1017 aa20.97■□□□□ 0.95
SCAF1-204ENST00000601038 MAP3K10Q02779 954 aa20.97■□□□□ 0.95
SCAF1-204ENST00000601038 MECOMQ03112 1051 aa20.97■□□□□ 0.95
SCAF1-204ENST00000601038 SH3BP5LQ7L8J4 393 aa20.97■□□□□ 0.95
SCAF1-204ENST00000601038 ZSCAN29Q8IWY8 852 aaPredicted RBP20.97■□□□□ 0.95
SCAF1-204ENST00000601038 TMEM57Q8N5G2 664 aa20.97■□□□□ 0.95
SCAF1-204ENST00000601038 SPATA5Q8NB90 893 aa20.97■□□□□ 0.95
SCAF1-204ENST00000601038 MROH7-TTC4A0A0A0MT08 1334 aa20.97■□□□□ 0.95
SCAF1-204ENST00000601038 PDHXO00330 501 aa20.96■□□□□ 0.95
SCAF1-204ENST00000601038 CXCL11O14625 94 aa20.96■□□□□ 0.95
SCAF1-204ENST00000601038 GNRH1P01148 92 aa20.96■□□□□ 0.95
SCAF1-204ENST00000601038 ARID4AP29374 1257 aaPredicted RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms