RNA–Protein interactions for RNA: ENST00000600778.3

SOX2-OT-233, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 762 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-233ENST00000600778 VGLL4Q14135 290 aa14.31□□□□□ -0.12
SOX2-OT-233ENST00000600778 MVPQ14764 893 aaKnown RBP14.31□□□□□ -0.12
SOX2-OT-233ENST00000600778 CDC42EP5Q6NZY7 148 aa14.31□□□□□ -0.12
SOX2-OT-233ENST00000600778 ZGPATQ8N5A5 531 aaKnown RBP14.31□□□□□ -0.12
SOX2-OT-233ENST00000600778 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.31□□□□□ -0.12
SOX2-OT-233ENST00000600778 CNKSR2Q8WXI2 1034 aa14.31□□□□□ -0.12
SOX2-OT-233ENST00000600778 CFHR5Q9BXR6 569 aa14.31□□□□□ -0.12
SOX2-OT-233ENST00000600778 C1orf115Q9H7X2 142 aa14.31□□□□□ -0.12
SOX2-OT-233ENST00000600778 USP40Q9NVE5 1235 aa14.31□□□□□ -0.12
SOX2-OT-233ENST00000600778 ABCF2Q9UG63 623 aa14.31□□□□□ -0.12
SOX2-OT-233ENST00000600778 CSADQ9Y600 493 aa14.31□□□□□ -0.12
SOX2-OT-233ENST00000600778 ZBTB22O15209 634 aa14.3□□□□□ -0.12
SOX2-OT-233ENST00000600778 RLBP1P12271 317 aa14.3□□□□□ -0.12
SOX2-OT-233ENST00000600778 GORABQ5T7V8 394 aa14.3□□□□□ -0.12
SOX2-OT-233ENST00000600778 ITPRIPQ8IWB1 547 aa14.3□□□□□ -0.12
SOX2-OT-233ENST00000600778 FAM151AQ8WW52 585 aa14.3□□□□□ -0.12
SOX2-OT-233ENST00000600778 HOOK2Q96ED9 719 aa14.3□□□□□ -0.12
SOX2-OT-233ENST00000600778 OTOFQ9HC10 1997 aa14.3□□□□□ -0.12
SOX2-OT-233ENST00000600778 ZBTB7BO15156 539 aaPredicted RBP14.29□□□□□ -0.12
SOX2-OT-233ENST00000600778 FKTNO75072 461 aa14.29□□□□□ -0.12
SOX2-OT-233ENST00000600778 ATP8B2P98198 1209 aa14.29□□□□□ -0.12
SOX2-OT-233ENST00000600778 NFIAQ12857 509 aa14.29□□□□□ -0.12
SOX2-OT-233ENST00000600778 NOM1Q5C9Z4 860 aaKnown RBP14.29□□□□□ -0.12
SOX2-OT-233ENST00000600778 DCAF15Q66K64 600 aa14.29□□□□□ -0.12
SOX2-OT-233ENST00000600778 OTUD7BQ6GQQ9 843 aa14.29□□□□□ -0.12
SOX2-OT-233ENST00000600778 MIGA2Q7L4E1 593 aa14.29□□□□□ -0.12
SOX2-OT-233ENST00000600778 DZIP1Q86YF9 867 aaKnown RBP14.29□□□□□ -0.12
SOX2-OT-233ENST00000600778 ZKSCAN4Q969J2 545 aaPredicted RBP14.29□□□□□ -0.12
SOX2-OT-233ENST00000600778 WRNIP1Q96S55 665 aa14.29□□□□□ -0.12
SOX2-OT-233ENST00000600778 PTPN18Q99952 460 aa14.29□□□□□ -0.12
SOX2-OT-233ENST00000600778 TESPA1A2RU30 521 aaPredicted RBP14.28□□□□□ -0.12
SOX2-OT-233ENST00000600778 OS9Q13438 667 aaPredicted RBP14.28□□□□□ -0.12
SOX2-OT-233ENST00000600778 POLA2Q14181 598 aa14.28□□□□□ -0.12
SOX2-OT-233ENST00000600778 PDS5AQ29RF7 1337 aaKnown RBP14.28□□□□□ -0.12
SOX2-OT-233ENST00000600778 SPTY2D1Q68D10 685 aaPredicted RBP14.28□□□□□ -0.12
SOX2-OT-233ENST00000600778 SSH3Q8TE77 659 aa14.28□□□□□ -0.12
SOX2-OT-233ENST00000600778 OTUD5Q96G74 571 aa14.28□□□□□ -0.12
SOX2-OT-233ENST00000600778 MS4A4AQ96JQ5 239 aa14.28□□□□□ -0.12
SOX2-OT-233ENST00000600778 ZNF341Q9BYN7 854 aa14.28□□□□□ -0.12
SOX2-OT-233ENST00000600778 HMG20BQ9P0W2 317 aa14.28□□□□□ -0.12
SOX2-OT-233ENST00000600778 FAM198AQ9UFP1 575 aa14.28□□□□□ -0.12
SOX2-OT-233ENST00000600778 RPAP1Q9BWH6 1393 aaPredicted RBP14.27□□□□□ -0.12
SOX2-OT-233ENST00000600778 SURF6O75683 361 aaKnown RBP14.27□□□□□ -0.13
SOX2-OT-233ENST00000600778 PKN2Q16513 984 aaKnown RBP14.27□□□□□ -0.13
SOX2-OT-233ENST00000600778 PI16Q6UXB8 463 aa14.27□□□□□ -0.13
SOX2-OT-233ENST00000600778 ERICH6Q7L0X2 663 aa14.27□□□□□ -0.13
SOX2-OT-233ENST00000600778 ZFPM1Q8IX07 1006 aa14.27□□□□□ -0.13
SOX2-OT-233ENST00000600778 SLF2Q8IX21 1173 aa14.27□□□□□ -0.13
SOX2-OT-233ENST00000600778 SPATA5Q8NB90 893 aa14.27□□□□□ -0.13
SOX2-OT-233ENST00000600778 YTHDC1Q96MU7 727 aaKnown RBP14.27□□□□□ -0.13
SOX2-OT-233ENST00000600778 SNCAIPQ9Y6H5 919 aa14.27□□□□□ -0.13
SOX2-OT-233ENST00000600778 GAKO14976 1311 aa14.26□□□□□ -0.13
SOX2-OT-233ENST00000600778 MYH2Q9UKX2 1941 aa14.26□□□□□ -0.13
SOX2-OT-233ENST00000600778 CCL15-CCL14A0A0B4J2E2 113 aa14.26□□□□□ -0.13
SOX2-OT-233ENST00000600778 SPDYE5A6NIY4 337 aa14.26□□□□□ -0.13
SOX2-OT-233ENST00000600778 GTF2A2P52657 109 aa14.26□□□□□ -0.13
SOX2-OT-233ENST00000600778 MECOMQ03112 1051 aa14.26□□□□□ -0.13
SOX2-OT-233ENST00000600778 CCL15Q16663 113 aa14.26□□□□□ -0.13
SOX2-OT-233ENST00000600778 TBC1D9Q6ZT07 1266 aa14.26□□□□□ -0.13
SOX2-OT-233ENST00000600778 PANK1Q8TE04 598 aa14.26□□□□□ -0.13
SOX2-OT-233ENST00000600778 FAM163AQ96GL9 167 aaPredicted RBP14.26□□□□□ -0.13
SOX2-OT-233ENST00000600778 LAMB1P07942 1786 aa14.26□□□□□ -0.13
SOX2-OT-233ENST00000600778 ARID4AP29374 1257 aaPredicted RBP14.25□□□□□ -0.13
SOX2-OT-233ENST00000600778 INPP5BP32019 993 aa14.25□□□□□ -0.13
SOX2-OT-233ENST00000600778 MCAMP43121 646 aa14.25□□□□□ -0.13
SOX2-OT-233ENST00000600778 BTDP43251 543 aa14.25□□□□□ -0.13
SOX2-OT-233ENST00000600778 RGS19P49795 217 aa14.25□□□□□ -0.13
SOX2-OT-233ENST00000600778 RGS3P49796 1198 aa14.25□□□□□ -0.13
SOX2-OT-233ENST00000600778 CRHR2Q13324 411 aa14.25□□□□□ -0.13
SOX2-OT-233ENST00000600778 TNNI3KQ59H18 835 aa14.25□□□□□ -0.13
SOX2-OT-233ENST00000600778 ERO1BQ86YB8 467 aa14.25□□□□□ -0.13
SOX2-OT-233ENST00000600778 BRI3BPQ8WY22 251 aa14.25□□□□□ -0.13
SOX2-OT-233ENST00000600778 GPR108Q9NPR9 543 aa14.25□□□□□ -0.13
SOX2-OT-233ENST00000600778 HPS5Q9UPZ3 1129 aa14.25□□□□□ -0.13
SOX2-OT-233ENST00000600778 FPGT-TNNI3KV9GXZ4 949 aa14.25□□□□□ -0.13
SOX2-OT-233ENST00000600778 AK9Q5TCS8 1911 aa14.25□□□□□ -0.13
SOX2-OT-233ENST00000600778 MROH7-TTC4A0A0A0MT08 1334 aa14.24□□□□□ -0.13
SOX2-OT-233ENST00000600778 UQCRFS1P1P0C7P4 283 aa14.24□□□□□ -0.13
SOX2-OT-233ENST00000600778 PICALMQ13492 652 aa14.24□□□□□ -0.13
SOX2-OT-233ENST00000600778 CCDC158Q5M9N0 1113 aa14.24□□□□□ -0.13
SOX2-OT-233ENST00000600778 TTC39AQ5SRH9 613 aa14.24□□□□□ -0.13
SOX2-OT-233ENST00000600778 ZSCAN29Q8IWY8 852 aaPredicted RBP14.24□□□□□ -0.13
SOX2-OT-233ENST00000600778 ZNF384Q8TF68 577 aa14.24□□□□□ -0.13
SOX2-OT-233ENST00000600778 DBNDD2Q9BQY9 259 aa14.24□□□□□ -0.13
SOX2-OT-233ENST00000600778 IDI2Q9BXS1 227 aa14.24□□□□□ -0.13
SOX2-OT-233ENST00000600778 RAI14Q9P0K7 980 aa14.24□□□□□ -0.13
SOX2-OT-233ENST00000600778 ZNF112Q9UJU3 913 aa14.24□□□□□ -0.13
SOX2-OT-233ENST00000600778 IRF6O14896 467 aa14.23□□□□□ -0.13
SOX2-OT-233ENST00000600778 ENTPD3O75355 529 aa14.23□□□□□ -0.13
SOX2-OT-233ENST00000600778 SOX10P56693 466 aa14.23□□□□□ -0.13
SOX2-OT-233ENST00000600778 GSTO1P78417 241 aa14.23□□□□□ -0.13
SOX2-OT-233ENST00000600778 MLLT1Q03111 559 aaPredicted RBP14.23□□□□□ -0.13
SOX2-OT-233ENST00000600778 PPIL2Q13356 520 aa14.23□□□□□ -0.13
SOX2-OT-233ENST00000600778 CEP85Q6P2H3 762 aa14.23□□□□□ -0.13
SOX2-OT-233ENST00000600778 FBXO46Q6PJ61 603 aaPredicted RBP14.23□□□□□ -0.13
SOX2-OT-233ENST00000600778 FAM43AQ8N2R8 423 aa14.23□□□□□ -0.13
SOX2-OT-233ENST00000600778 CD99L2Q8TCZ2 262 aa14.23□□□□□ -0.13
SOX2-OT-233ENST00000600778 NSUN4Q96CB9 384 aaKnown RBP14.23□□□□□ -0.13
SOX2-OT-233ENST00000600778 ZFYVE28Q9HCC9 887 aa14.23□□□□□ -0.13
SOX2-OT-233ENST00000600778 DDX4Q9NQI0 724 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms