RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 CLMNQ96JQ2 1002 aa19.27■□□□□ 0.68
IRF3-226ENST00000600453 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.27■□□□□ 0.68
IRF3-226ENST00000600453 CSADQ9Y600 493 aa19.27■□□□□ 0.68
IRF3-226ENST00000600453 SSC5DA1L4H1 1573 aa19.27■□□□□ 0.67
IRF3-226ENST00000600453 CACNB3P54284 484 aa19.26■□□□□ 0.67
IRF3-226ENST00000600453 DGKZQ13574 1117 aa19.26■□□□□ 0.67
IRF3-226ENST00000600453 DIXDC1Q155Q3 683 aa19.26■□□□□ 0.67
IRF3-226ENST00000600453 NOM1Q5C9Z4 860 aaKnown RBP19.26■□□□□ 0.67
IRF3-226ENST00000600453 CCDC158Q5M9N0 1113 aa19.26■□□□□ 0.67
IRF3-226ENST00000600453 CDC42EP5Q6NZY7 148 aa19.26■□□□□ 0.67
IRF3-226ENST00000600453 FAM163AQ96GL9 167 aaPredicted RBP19.26■□□□□ 0.67
IRF3-226ENST00000600453 CFHR5Q9BXR6 569 aa19.26■□□□□ 0.67
IRF3-226ENST00000600453 USP40Q9NVE5 1235 aa19.26■□□□□ 0.67
IRF3-226ENST00000600453 NOP58Q9Y2X3 529 aaKnown RBP19.26■□□□□ 0.67
IRF3-226ENST00000600453 LDHCP07864 332 aa19.25■□□□□ 0.67
IRF3-226ENST00000600453 GSTO1P78417 241 aa19.25■□□□□ 0.67
IRF3-226ENST00000600453 SPATA5Q8NB90 893 aa19.25■□□□□ 0.67
IRF3-226ENST00000600453 RPAP1Q9BWH6 1393 aaPredicted RBP19.24■□□□□ 0.67
IRF3-226ENST00000600453 IGSF3O75054 1194 aa19.24■□□□□ 0.67
IRF3-226ENST00000600453 TBC1D8O95759 1140 aa19.24■□□□□ 0.67
IRF3-226ENST00000600453 ARID4AP29374 1257 aaPredicted RBP19.24■□□□□ 0.67
IRF3-226ENST00000600453 C1orf115Q9H7X2 142 aa19.24■□□□□ 0.67
IRF3-226ENST00000600453 MAP4K4O95819 1239 aaPredicted RBP19.23■□□□□ 0.67
IRF3-226ENST00000600453 HSP90AB4PQ58FF6 505 aa19.23■□□□□ 0.67
IRF3-226ENST00000600453 TNNI3KQ59H18 835 aa19.23■□□□□ 0.67
IRF3-226ENST00000600453 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.23■□□□□ 0.67
IRF3-226ENST00000600453 IFNL1Q8IU54 200 aa19.23■□□□□ 0.67
IRF3-226ENST00000600453 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.23■□□□□ 0.67
IRF3-226ENST00000600453 PANK1Q8TE04 598 aa19.23■□□□□ 0.67
IRF3-226ENST00000600453 ZNF341Q9BYN7 854 aa19.23■□□□□ 0.67
IRF3-226ENST00000600453 MCOLN1Q9GZU1 580 aa19.23■□□□□ 0.67
IRF3-226ENST00000600453 ELP3Q9H9T3 547 aa19.23■□□□□ 0.67
IRF3-226ENST00000600453 HMG20BQ9P0W2 317 aa19.23■□□□□ 0.67
IRF3-226ENST00000600453 RCAN3Q9UKA8 241 aa19.23■□□□□ 0.67
IRF3-226ENST00000600453 DDX19BQ9UMR2 479 aa19.23■□□□□ 0.67
IRF3-226ENST00000600453 FPGT-TNNI3KV9GXZ4 949 aa19.23■□□□□ 0.67
IRF3-226ENST00000600453 ENTPD3O75355 529 aa19.22■□□□□ 0.67
IRF3-226ENST00000600453 GTF2A2P52657 109 aa19.22■□□□□ 0.67
IRF3-226ENST00000600453 TTC39AQ5SRH9 613 aa19.22■□□□□ 0.67
IRF3-226ENST00000600453 ERC1Q8IUD2 1116 aa19.22■□□□□ 0.67
IRF3-226ENST00000600453 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.22■□□□□ 0.67
IRF3-226ENST00000600453 OPTNQ96CV9 577 aa19.22■□□□□ 0.67
IRF3-226ENST00000600453 IDI2Q9BXS1 227 aa19.22■□□□□ 0.67
IRF3-226ENST00000600453 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.22■□□□□ 0.67
IRF3-226ENST00000600453 GAKO14976 1311 aa19.22■□□□□ 0.67
IRF3-226ENST00000600453 AK9Q5TCS8 1911 aa19.21■□□□□ 0.67
IRF3-226ENST00000600453 MYH2Q9UKX2 1941 aa19.21■□□□□ 0.67
IRF3-226ENST00000600453 TESPA1A2RU30 521 aaPredicted RBP19.21■□□□□ 0.67
IRF3-226ENST00000600453 GPR25O00155 361 aa19.21■□□□□ 0.67
IRF3-226ENST00000600453 TCP10Q12799 353 aa19.21■□□□□ 0.67
IRF3-226ENST00000600453 VGLL4Q14135 290 aa19.21■□□□□ 0.67
IRF3-226ENST00000600453 PKN2Q16513 984 aaKnown RBP19.21■□□□□ 0.67
IRF3-226ENST00000600453 CEP85Q6P2H3 762 aa19.21■□□□□ 0.67
IRF3-226ENST00000600453 CTU1Q7Z7A3 348 aaKnown RBP19.21■□□□□ 0.67
IRF3-226ENST00000600453 ERO1BQ86YB8 467 aa19.21■□□□□ 0.67
IRF3-226ENST00000600453 CDAN1Q8IWY9 1227 aa19.21■□□□□ 0.67
IRF3-226ENST00000600453 RPAP2Q8IXW5 612 aaPredicted RBP19.21■□□□□ 0.67
IRF3-226ENST00000600453 ZNF512BQ96KM6 892 aaPredicted RBP19.21■□□□□ 0.67
IRF3-226ENST00000600453 WRNIP1Q96S55 665 aa19.21■□□□□ 0.67
IRF3-226ENST00000600453 LRP2BPQ9P2M1 347 aa19.21■□□□□ 0.67
IRF3-226ENST00000600453 WDHD1O75717 1129 aaPredicted RBP19.2■□□□□ 0.66
IRF3-226ENST00000600453 MECOMQ03112 1051 aa19.2■□□□□ 0.66
IRF3-226ENST00000600453 RAI14Q9P0K7 980 aa19.2■□□□□ 0.66
IRF3-226ENST00000600453 GPR75-ASB3A0A0A6YYF3 556 aa19.19■□□□□ 0.66
IRF3-226ENST00000600453 FKTNO75072 461 aa19.19■□□□□ 0.66
IRF3-226ENST00000600453 HMMRO75330 724 aa19.19■□□□□ 0.66
IRF3-226ENST00000600453 NFIAQ12857 509 aa19.19■□□□□ 0.66
IRF3-226ENST00000600453 MIGA2Q7L4E1 593 aa19.19■□□□□ 0.66
IRF3-226ENST00000600453 ZNF296Q8WUU4 475 aaPredicted RBP19.19■□□□□ 0.66
IRF3-226ENST00000600453 FAM198AQ9UFP1 575 aa19.19■□□□□ 0.66
IRF3-226ENST00000600453 MROH7-TTC4A0A0A0MT08 1334 aa19.19■□□□□ 0.66
IRF3-226ENST00000600453 SPDYE5A6NIY4 337 aa19.18■□□□□ 0.66
IRF3-226ENST00000600453 CCDC85CA6NKD9 419 aa19.18■□□□□ 0.66
IRF3-226ENST00000600453 GJA5P36382 358 aa19.18■□□□□ 0.66
IRF3-226ENST00000600453 MCAMP43121 646 aa19.18■□□□□ 0.66
IRF3-226ENST00000600453 BTDP43251 543 aa19.18■□□□□ 0.66
IRF3-226ENST00000600453 NSUN4Q96CB9 384 aaKnown RBP19.18■□□□□ 0.66
IRF3-226ENST00000600453 NOL10Q9BSC4 688 aaKnown RBP19.18■□□□□ 0.66
IRF3-226ENST00000600453 NPM3O75607 178 aaKnown RBP19.17■□□□□ 0.66
IRF3-226ENST00000600453 RGS3P49796 1198 aa19.17■□□□□ 0.66
IRF3-226ENST00000600453 PPATQ06203 517 aa19.17■□□□□ 0.66
IRF3-226ENST00000600453 PDE3AQ14432 1141 aa19.17■□□□□ 0.66
IRF3-226ENST00000600453 TBC1D9Q6ZT07 1266 aa19.17■□□□□ 0.66
IRF3-226ENST00000600453 ZSCAN29Q8IWY8 852 aaPredicted RBP19.17■□□□□ 0.66
IRF3-226ENST00000600453 OTUD5Q96G74 571 aa19.17■□□□□ 0.66
IRF3-226ENST00000600453 MS4A4AQ96JQ5 239 aa19.17■□□□□ 0.66
IRF3-226ENST00000600453 DBNDD2Q9BQY9 259 aa19.17■□□□□ 0.66
IRF3-226ENST00000600453 ZNF112Q9UJU3 913 aa19.17■□□□□ 0.66
IRF3-226ENST00000600453 COG6Q9Y2V7 657 aa19.17■□□□□ 0.66
IRF3-226ENST00000600453 IGF2BP3O00425 579 aaKnown RBP eCLIP19.16■□□□□ 0.66
IRF3-226ENST00000600453 BAG3O95817 575 aa19.16■□□□□ 0.66
IRF3-226ENST00000600453 CETPP11597 493 aa19.16■□□□□ 0.66
IRF3-226ENST00000600453 SNAPC2Q13487 334 aa19.16■□□□□ 0.66
IRF3-226ENST00000600453 ZKSCAN4Q969J2 545 aaPredicted RBP19.16■□□□□ 0.66
IRF3-226ENST00000600453 ZBTB40Q9NUA8 1239 aa19.16■□□□□ 0.66
IRF3-226ENST00000600453 CCL15-CCL14A0A0B4J2E2 113 aa19.15■□□□□ 0.66
IRF3-226ENST00000600453 PPIL2Q13356 520 aa19.15■□□□□ 0.66
IRF3-226ENST00000600453 CCL15Q16663 113 aa19.15■□□□□ 0.66
IRF3-226ENST00000600453 PI16Q6UXB8 463 aa19.15■□□□□ 0.66
IRF3-226ENST00000600453 ZCCHC17Q9NP64 241 aaKnown RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms