RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.41□□□□□ -0.26
ARHGEF1-220ENST00000600274 NACAP1Q9BZK3 213 aa13.41□□□□□ -0.26
ARHGEF1-220ENST00000600274 EPB41L4AQ9HCS5 686 aaPredicted RBP13.41□□□□□ -0.26
ARHGEF1-220ENST00000600274 ZSWIM5Q9P217 1185 aa13.41□□□□□ -0.26
ARHGEF1-220ENST00000600274 KCNJ14Q9UNX9 436 aa13.41□□□□□ -0.26
ARHGEF1-220ENST00000600274 SPATA31A1Q5TZJ5 1347 aa13.41□□□□□ -0.26
ARHGEF1-220ENST00000600274 PARP4Q9UKK3 1724 aaKnown RBP13.41□□□□□ -0.26
ARHGEF1-220ENST00000600274 GNPATO15228 680 aa13.41□□□□□ -0.26
ARHGEF1-220ENST00000600274 HSP90AA4PQ58FG1 418 aa13.41□□□□□ -0.26
ARHGEF1-220ENST00000600274 ZNF652Q9Y2D9 606 aa13.41□□□□□ -0.26
ARHGEF1-220ENST00000600274 NDUFA8P51970 172 aa13.41□□□□□ -0.26
ARHGEF1-220ENST00000600274 DYNLL1P63167 89 aaKnown RBP13.41□□□□□ -0.26
ARHGEF1-220ENST00000600274 ILDR1Q86SU0 546 aaPredicted RBP13.41□□□□□ -0.26
ARHGEF1-220ENST00000600274 CRYBG1Q9Y4K1 1723 aa13.4□□□□□ -0.26
ARHGEF1-220ENST00000600274 SPTLC2O15270 562 aa13.4□□□□□ -0.26
ARHGEF1-220ENST00000600274 PDIA4P13667 645 aaKnown RBP13.4□□□□□ -0.26
ARHGEF1-220ENST00000600274 HS1BP3Q53T59 392 aa13.4□□□□□ -0.26
ARHGEF1-220ENST00000600274 APOA5Q6Q788 366 aa13.4□□□□□ -0.26
ARHGEF1-220ENST00000600274 SLC51AQ86UW1 340 aa13.4□□□□□ -0.26
ARHGEF1-220ENST00000600274 FBXO18Q8NFZ0 1043 aa13.4□□□□□ -0.26
ARHGEF1-220ENST00000600274 PYCARDQ9ULZ3 195 aa13.4□□□□□ -0.26
ARHGEF1-220ENST00000600274 GOLGA6L6A8MZA4 724 aa13.4□□□□□ -0.26
ARHGEF1-220ENST00000600274 UBE3CQ15386 1083 aa13.4□□□□□ -0.26
ARHGEF1-220ENST00000600274 NBPF5PQ86XG9 351 aaPredicted RBP13.4□□□□□ -0.26
ARHGEF1-220ENST00000600274 MRPS27Q92552 414 aaKnown RBP13.4□□□□□ -0.26
ARHGEF1-220ENST00000600274 CELF1Q92879 486 aaKnown RBP13.4□□□□□ -0.26
ARHGEF1-220ENST00000600274 CDC5LQ99459 802 aaKnown RBP13.4□□□□□ -0.26
ARHGEF1-220ENST00000600274 UBAC1Q9BSL1 405 aa13.4□□□□□ -0.26
ARHGEF1-220ENST00000600274 SPDYE4A6NLX3 237 aa13.39□□□□□ -0.27
ARHGEF1-220ENST00000600274 UBAP1LF5GYI3 381 aa13.39□□□□□ -0.27
ARHGEF1-220ENST00000600274 MYSM1Q5VVJ2 828 aa13.39□□□□□ -0.27
ARHGEF1-220ENST00000600274 KRT40Q6A162 431 aa13.39□□□□□ -0.27
ARHGEF1-220ENST00000600274 AOPEPQ8N6M6 819 aa13.39□□□□□ -0.27
ARHGEF1-220ENST00000600274 KLRK1P26718 216 aa13.39□□□□□ -0.27
ARHGEF1-220ENST00000600274 NOLC1Q14978 699 aaKnown RBP eCLIP13.39□□□□□ -0.27
ARHGEF1-220ENST00000600274 ZNF592Q92610 1267 aa13.39□□□□□ -0.27
ARHGEF1-220ENST00000600274 CLIC6Q96NY7 704 aa13.39□□□□□ -0.27
ARHGEF1-220ENST00000600274 XIRP1Q702N8 1843 aaKnown RBP13.39□□□□□ -0.27
ARHGEF1-220ENST00000600274 PATL2C9JE40 543 aaKnown RBP13.39□□□□□ -0.27
ARHGEF1-220ENST00000600274 LINC00116Q8NCU8 138 aa13.39□□□□□ -0.27
ARHGEF1-220ENST00000600274 CLIP2Q9UDT6 1046 aa13.39□□□□□ -0.27
ARHGEF1-220ENST00000600274 RCOR1Q9UKL0 485 aa13.39□□□□□ -0.27
ARHGEF1-220ENST00000600274 GLI3P10071 1580 aa13.39□□□□□ -0.27
ARHGEF1-220ENST00000600274 ZPR1O75312 459 aa13.38□□□□□ -0.27
ARHGEF1-220ENST00000600274 WTAPQ15007 396 aa13.38□□□□□ -0.27
ARHGEF1-220ENST00000600274 CAVIN4Q5BKX8 364 aa13.38□□□□□ -0.27
ARHGEF1-220ENST00000600274 PDILTQ8N807 584 aa13.38□□□□□ -0.27
ARHGEF1-220ENST00000600274 SH2B2O14492 632 aaPredicted RBP13.38□□□□□ -0.27
ARHGEF1-220ENST00000600274 SART3Q15020 963 aaKnown RBP13.38□□□□□ -0.27
ARHGEF1-220ENST00000600274 PTPN21Q16825 1174 aa13.38□□□□□ -0.27
ARHGEF1-220ENST00000600274 PARP10Q53GL7 1025 aa13.38□□□□□ -0.27
ARHGEF1-220ENST00000600274 TBC1D9BQ66K14 1250 aa13.38□□□□□ -0.27
ARHGEF1-220ENST00000600274 ADGRA1Q86SQ6 560 aa13.38□□□□□ -0.27
ARHGEF1-220ENST00000600274 NTSR2O95665 410 aa13.38□□□□□ -0.27
ARHGEF1-220ENST00000600274 FAM160A1Q05DH4 1040 aa13.38□□□□□ -0.27
ARHGEF1-220ENST00000600274 GPR101Q96P66 508 aaPredicted RBP13.38□□□□□ -0.27
ARHGEF1-220ENST00000600274 GSG1L2A8MUP6 293 aa13.37□□□□□ -0.27
ARHGEF1-220ENST00000600274 SMC2O95347 1197 aa13.37□□□□□ -0.27
ARHGEF1-220ENST00000600274 ARID4AP29374 1257 aaPredicted RBP13.37□□□□□ -0.27
ARHGEF1-220ENST00000600274 GUCY1A2P33402 732 aa13.37□□□□□ -0.27
ARHGEF1-220ENST00000600274 AKNAD1Q5T1N1 836 aa13.37□□□□□ -0.27
ARHGEF1-220ENST00000600274 AGXT2Q9BYV1 514 aa13.37□□□□□ -0.27
ARHGEF1-220ENST00000600274 GNL3LQ9NVN8 582 aaKnown RBP13.37□□□□□ -0.27
ARHGEF1-220ENST00000600274 MAGEB6P1A0A0J9YX57 407 aa13.37□□□□□ -0.27
ARHGEF1-220ENST00000600274 ZNF500O60304 480 aaPredicted RBP13.37□□□□□ -0.27
ARHGEF1-220ENST00000600274 EVX2Q03828 476 aa13.37□□□□□ -0.27
ARHGEF1-220ENST00000600274 SSRP1Q08945 709 aaKnown RBP13.37□□□□□ -0.27
ARHGEF1-220ENST00000600274 ARID5BQ14865 1188 aa13.37□□□□□ -0.27
ARHGEF1-220ENST00000600274 SETDB2Q96T68 719 aa13.37□□□□□ -0.27
ARHGEF1-220ENST00000600274 AATFQ9NY61 560 aaKnown RBP eCLIP13.37□□□□□ -0.27
ARHGEF1-220ENST00000600274 FGFR2P21802 821 aa13.36□□□□□ -0.27
ARHGEF1-220ENST00000600274 AKAP17AQ02040 695 aaKnown RBP13.36□□□□□ -0.27
ARHGEF1-220ENST00000600274 KIF23Q02241 960 aaPredicted RBP13.36□□□□□ -0.27
ARHGEF1-220ENST00000600274 ANO1Q5XXA6 986 aa13.36□□□□□ -0.27
ARHGEF1-220ENST00000600274 PLCD3Q8N3E9 789 aa13.36□□□□□ -0.27
ARHGEF1-220ENST00000600274 BTBD18B2RXH4 712 aa13.36□□□□□ -0.27
ARHGEF1-220ENST00000600274 CDKL5O76039 1030 aa13.36□□□□□ -0.27
ARHGEF1-220ENST00000600274 STX1AQ16623 288 aa13.36□□□□□ -0.27
ARHGEF1-220ENST00000600274 RTN1Q16799 776 aa13.36□□□□□ -0.27
ARHGEF1-220ENST00000600274 LINC00301Q8NCQ3 95 aa13.36□□□□□ -0.27
ARHGEF1-220ENST00000600274 C16orf45Q96MC5 204 aaPredicted RBP13.36□□□□□ -0.27
ARHGEF1-220ENST00000600274 STRCQ7RTU9 1775 aa13.36□□□□□ -0.27
ARHGEF1-220ENST00000600274 TOGARAM1Q9Y4F4 1720 aa13.36□□□□□ -0.27
ARHGEF1-220ENST00000600274 TCRBV5S4A2TA0A5A2 114 aa13.36□□□□□ -0.27
ARHGEF1-220ENST00000600274 ANKIB1Q9P2G1 1089 aa13.36□□□□□ -0.27
ARHGEF1-220ENST00000600274 TACC3Q9Y6A5 838 aa13.36□□□□□ -0.27
ARHGEF1-220ENST00000600274 LAMB4A4D0S4 1761 aa13.35□□□□□ -0.27
ARHGEF1-220ENST00000600274 SAFBQ15424 915 aaKnown RBP eCLIP13.35□□□□□ -0.27
ARHGEF1-220ENST00000600274 TRIM22Q8IYM9 498 aa13.35□□□□□ -0.27
ARHGEF1-220ENST00000600274 CEP57L1Q8IYX8 460 aa13.35□□□□□ -0.27
ARHGEF1-220ENST00000600274 LY9Q9HBG7 655 aa13.35□□□□□ -0.27
ARHGEF1-220ENST00000600274 ZMYM6O95789 1325 aa13.35□□□□□ -0.27
ARHGEF1-220ENST00000600274 SLC3A2P08195 630 aaKnown RBP13.35□□□□□ -0.27
ARHGEF1-220ENST00000600274 MEX3CQ5U5Q3 659 aaKnown RBP13.35□□□□□ -0.27
ARHGEF1-220ENST00000600274 KCNF1Q9H3M0 494 aa13.35□□□□□ -0.27
ARHGEF1-220ENST00000600274 BAZ2BQ9UIF8 2168 aaKnown RBP13.35□□□□□ -0.27
ARHGEF1-220ENST00000600274 TJP1Q07157 1748 aa13.35□□□□□ -0.27
ARHGEF1-220ENST00000600274 SALL1Q9NSC2 1324 aa13.35□□□□□ -0.27
ARHGEF1-220ENST00000600274 VGLL3A8MV65 326 aa13.35□□□□□ -0.27
ARHGEF1-220ENST00000600274 NR5A1Q13285 461 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms