RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 TEKT1Q969V4 418 aa7.72□□□□□ -1.17
VRK3-220ENST00000600259 SHISA4Q96DD7 197 aa7.72□□□□□ -1.17
VRK3-220ENST00000600259 TRIM47Q96LD4 638 aa7.72□□□□□ -1.17
VRK3-220ENST00000600259 WRNIP1Q96S55 665 aa7.72□□□□□ -1.17
VRK3-220ENST00000600259 USP44Q9H0E7 712 aa7.72□□□□□ -1.17
VRK3-220ENST00000600259 PRO3102Q9H379 93 aa7.72□□□□□ -1.17
VRK3-220ENST00000600259 KCNH4Q9UQ05 1017 aa7.72□□□□□ -1.17
VRK3-220ENST00000600259 SUGT1Q9Y2Z0 365 aa7.72□□□□□ -1.17
VRK3-220ENST00000600259 SZT2Q5T011 3432 aa7.72□□□□□ -1.17
VRK3-220ENST00000600259 OTOFQ9HC10 1997 aa7.71□□□□□ -1.17
VRK3-220ENST00000600259 MYCP01106 439 aaPredicted RBP7.71□□□□□ -1.18
VRK3-220ENST00000600259 GNRH1P01148 92 aa7.71□□□□□ -1.18
VRK3-220ENST00000600259 PRMT2P55345 433 aa7.71□□□□□ -1.18
VRK3-220ENST00000600259 SNAPC2Q13487 334 aa7.71□□□□□ -1.18
VRK3-220ENST00000600259 SLC4A8Q2Y0W8 1093 aa7.71□□□□□ -1.18
VRK3-220ENST00000600259 METTL24Q5JXM2 366 aa7.71□□□□□ -1.18
VRK3-220ENST00000600259 GPAT2Q6NUI2 795 aa7.71□□□□□ -1.18
VRK3-220ENST00000600259 MIGA2Q7L4E1 593 aa7.71□□□□□ -1.18
VRK3-220ENST00000600259 ANKRD23Q86SG2 305 aa7.71□□□□□ -1.18
VRK3-220ENST00000600259 MRPL50Q8N5N7 158 aaKnown RBP7.71□□□□□ -1.18
VRK3-220ENST00000600259 FAM151AQ8WW52 585 aa7.71□□□□□ -1.18
VRK3-220ENST00000600259 MRS2Q9HD23 443 aa7.71□□□□□ -1.18
VRK3-220ENST00000600259 SRRDQ9UH36 339 aa7.71□□□□□ -1.18
VRK3-220ENST00000600259 CACNA1FO60840 1977 aa7.71□□□□□ -1.18
VRK3-220ENST00000600259 ZNF521Q96K83 1311 aa7.71□□□□□ -1.18
VRK3-220ENST00000600259 KIF16BQ96L93 1317 aa7.71□□□□□ -1.18
VRK3-220ENST00000600259 PHF20L1A8MW92 1017 aa7.7□□□□□ -1.18
VRK3-220ENST00000600259 BCRP11274 1271 aa7.7□□□□□ -1.18
VRK3-220ENST00000600259 OSBPP22059 807 aa7.7□□□□□ -1.18
VRK3-220ENST00000600259 PSMC4P43686 418 aa7.7□□□□□ -1.18
VRK3-220ENST00000600259 MAP3K10Q02779 954 aa7.7□□□□□ -1.18
VRK3-220ENST00000600259 NFIAQ12857 509 aa7.7□□□□□ -1.18
VRK3-220ENST00000600259 CAVIN4Q5BKX8 364 aa7.7□□□□□ -1.18
VRK3-220ENST00000600259 NOL9Q5SY16 702 aaKnown RBP7.7□□□□□ -1.18
VRK3-220ENST00000600259 CDC42EP5Q6NZY7 148 aa7.7□□□□□ -1.18
VRK3-220ENST00000600259 ATG9AQ7Z3C6 839 aa7.7□□□□□ -1.18
VRK3-220ENST00000600259 ZFPM1Q8IX07 1006 aa7.7□□□□□ -1.18
VRK3-220ENST00000600259 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.7□□□□□ -1.18
VRK3-220ENST00000600259 ZNF341Q9BYN7 854 aa7.7□□□□□ -1.18
VRK3-220ENST00000600259 FAM198AQ9UFP1 575 aa7.7□□□□□ -1.18
VRK3-220ENST00000600259 CPA4Q9UI42 421 aa7.7□□□□□ -1.18
VRK3-220ENST00000600259 DAGLAQ9Y4D2 1042 aa7.7□□□□□ -1.18
VRK3-220ENST00000600259 RPAP1Q9BWH6 1393 aaPredicted RBP7.7□□□□□ -1.18
VRK3-220ENST00000600259 EYA2O00167 538 aa7.69□□□□□ -1.18
VRK3-220ENST00000600259 PDHXO00330 501 aa7.69□□□□□ -1.18
VRK3-220ENST00000600259 FRAT2O75474 233 aaPredicted RBP7.69□□□□□ -1.18
VRK3-220ENST00000600259 MYCNP04198 464 aaPredicted RBP7.69□□□□□ -1.18
VRK3-220ENST00000600259 GJB1P08034 283 aa7.69□□□□□ -1.18
VRK3-220ENST00000600259 GRK4P32298 578 aa7.69□□□□□ -1.18
VRK3-220ENST00000600259 GJA8P48165 433 aa7.69□□□□□ -1.18
VRK3-220ENST00000600259 KIF22Q14807 665 aa7.69□□□□□ -1.18
VRK3-220ENST00000600259 DCAF15Q66K64 600 aa7.69□□□□□ -1.18
VRK3-220ENST00000600259 VPS37DQ86XT2 251 aa7.69□□□□□ -1.18
VRK3-220ENST00000600259 HOOK2Q96ED9 719 aa7.69□□□□□ -1.18
VRK3-220ENST00000600259 RBM27Q9P2N5 1060 aaKnown RBP7.69□□□□□ -1.18
VRK3-220ENST00000600259 ATRNL1Q5VV63 1379 aa7.69□□□□□ -1.18
VRK3-220ENST00000600259 ARAP2Q8WZ64 1704 aa7.69□□□□□ -1.18
VRK3-220ENST00000600259 ZSWIM8A7E2V4 1837 aa7.68□□□□□ -1.18
VRK3-220ENST00000600259 CXCL11O14625 94 aa7.68□□□□□ -1.18
VRK3-220ENST00000600259 IFIT1P09914 478 aaKnown RBP7.68□□□□□ -1.18
VRK3-220ENST00000600259 SLURP2P0DP57 97 aa7.68□□□□□ -1.18
VRK3-220ENST00000600259 PRDX5P30044 214 aa7.68□□□□□ -1.18
VRK3-220ENST00000600259 TCP10Q12799 353 aa7.68□□□□□ -1.18
VRK3-220ENST00000600259 PUM3Q15397 648 aaKnown RBP7.68□□□□□ -1.18
VRK3-220ENST00000600259 DIXDC1Q155Q3 683 aa7.68□□□□□ -1.18
VRK3-220ENST00000600259 SH3BP5LQ7L8J4 393 aa7.68□□□□□ -1.18
VRK3-220ENST00000600259 WDR66Q8TBY9 1149 aa7.68□□□□□ -1.18
VRK3-220ENST00000600259 LPIN2Q92539 896 aa7.68□□□□□ -1.18
VRK3-220ENST00000600259 TMOD2Q9NZR1 351 aa7.68□□□□□ -1.18
VRK3-220ENST00000600259 GABRQQ9UN88 632 aa7.68□□□□□ -1.18
VRK3-220ENST00000600259 MAST3O60307 1309 aa7.68□□□□□ -1.18
VRK3-220ENST00000600259 WDHD1O75717 1129 aaPredicted RBP7.67□□□□□ -1.18
VRK3-220ENST00000600259 ECM2O94769 699 aaPredicted RBP7.67□□□□□ -1.18
VRK3-220ENST00000600259 FMNL1O95466 1100 aaPredicted RBP7.67□□□□□ -1.18
VRK3-220ENST00000600259 CYP2C8P10632 490 aa7.67□□□□□ -1.18
VRK3-220ENST00000600259 CCL5P13501 91 aa7.67□□□□□ -1.18
VRK3-220ENST00000600259 HOXD10P28358 340 aa7.67□□□□□ -1.18
VRK3-220ENST00000600259 PRKCZQ05513 592 aa7.67□□□□□ -1.18
VRK3-220ENST00000600259 CHRDL2Q6WN34 429 aa7.67□□□□□ -1.18
VRK3-220ENST00000600259 SSH1Q8WYL5 1049 aa7.67□□□□□ -1.18
VRK3-220ENST00000600259 IDI2Q9BXS1 227 aa7.67□□□□□ -1.18
VRK3-220ENST00000600259 USP40Q9NVE5 1235 aa7.67□□□□□ -1.18
VRK3-220ENST00000600259 AFG3L2Q9Y4W6 797 aa7.67□□□□□ -1.18
VRK3-220ENST00000600259 A0A0C4DFX4 3053 aa7.66□□□□□ -1.18
VRK3-220ENST00000600259 A0A0G2JLL6 359 aaPredicted RBP7.66□□□□□ -1.18
VRK3-220ENST00000600259 ZBTB7BO15156 539 aaPredicted RBP7.66□□□□□ -1.18
VRK3-220ENST00000600259 SGPL1O95470 568 aa7.66□□□□□ -1.18
VRK3-220ENST00000600259 SLC5A1P13866 664 aa7.66□□□□□ -1.18
VRK3-220ENST00000600259 PTPRAP18433 802 aa7.66□□□□□ -1.18
VRK3-220ENST00000600259 PHKA1P46020 1223 aa7.66□□□□□ -1.18
VRK3-220ENST00000600259 PRRT2Q7Z6L0 340 aaPredicted RBP7.66□□□□□ -1.18
VRK3-220ENST00000600259 NKX2-3Q8TAU0 364 aa7.66□□□□□ -1.18
VRK3-220ENST00000600259 RAET1EQ8TD07 263 aa7.66□□□□□ -1.18
VRK3-220ENST00000600259 DPF3Q92784 378 aa7.66□□□□□ -1.18
VRK3-220ENST00000600259 FAM163AQ96GL9 167 aaPredicted RBP7.66□□□□□ -1.18
VRK3-220ENST00000600259 RNF208Q9H0X6 261 aa7.66□□□□□ -1.18
VRK3-220ENST00000600259 UNC93B1Q9H1C4 597 aa7.66□□□□□ -1.18
VRK3-220ENST00000600259 FBXO3Q9UK99 471 aa7.66□□□□□ -1.18
VRK3-220ENST00000600259 ZHX2Q9Y6X8 837 aa7.66□□□□□ -1.18
VRK3-220ENST00000600259 GAKO14976 1311 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms