RNA–Protein interactions for RNA: ENST00000599687.1

SNRNP70-208, Transcript of small nuclear ribonucleoprotein U1 subunit 70, human

TSL 2

Gene SNRNP70, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP70-208	ENST00000599687	GOLGB1	Q14789	3259 aa	Known RBP	11.24	□□□□□ -0.61
SNRNP70-208	ENST00000599687	ANKRD36C	Q5JPF3	1778 aa		11.23	□□□□□ -0.61
SNRNP70-208	ENST00000599687	FAM181B	A6NEQ2	426 aa		11.23	□□□□□ -0.61
SNRNP70-208	ENST00000599687	CD2BP2	O95400	341 aa	Known RBP	11.23	□□□□□ -0.61
SNRNP70-208	ENST00000599687	ALDH1B1	P30837	517 aa		11.23	□□□□□ -0.61
SNRNP70-208	ENST00000599687	MARS	P56192	900 aa	Known RBP	11.23	□□□□□ -0.61
SNRNP70-208	ENST00000599687	TCIRG1	Q13488	830 aa		11.23	□□□□□ -0.61
SNRNP70-208	ENST00000599687	HSP90AB3P	Q58FF7	597 aa		11.23	□□□□□ -0.61
SNRNP70-208	ENST00000599687	SLC10A5	Q5PT55	438 aa		11.23	□□□□□ -0.61
SNRNP70-208	ENST00000599687	PLBD2	Q8NHP8	589 aa		11.23	□□□□□ -0.61
SNRNP70-208	ENST00000599687	HYPK	Q9NX55	129 aa		11.23	□□□□□ -0.61
SNRNP70-208	ENST00000599687	RIC1	Q4ADV7	1423 aa		11.23	□□□□□ -0.61
SNRNP70-208	ENST00000599687	F12	P00748	615 aa	Predicted RBP	11.22	□□□□□ -0.61
SNRNP70-208	ENST00000599687	SOGA3	Q5TF21	947 aa		11.22	□□□□□ -0.61
SNRNP70-208	ENST00000599687	NLRP10	Q86W26	655 aa		11.22	□□□□□ -0.61
SNRNP70-208	ENST00000599687	ANKMY2	Q8IV38	441 aa		11.22	□□□□□ -0.61
SNRNP70-208	ENST00000599687	GIPC2	Q8TF65	315 aa		11.22	□□□□□ -0.61
SNRNP70-208	ENST00000599687	UTP14A	Q9BVJ6	771 aa	Known RBP	11.22	□□□□□ -0.61
SNRNP70-208	ENST00000599687	NMRK2	Q9NPI5	230 aa		11.22	□□□□□ -0.61
SNRNP70-208	ENST00000599687	LTBP3	Q9NS15	1303 aa		11.22	□□□□□ -0.61
SNRNP70-208	ENST00000599687	MAP10	Q9P2G4	905 aa		11.22	□□□□□ -0.61
SNRNP70-208	ENST00000599687	DACH1	Q9UI36	760 aa		11.22	□□□□□ -0.61
SNRNP70-208	ENST00000599687	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.22	□□□□□ -0.61
SNRNP70-208	ENST00000599687	KDM2B	Q8NHM5	1336 aa		11.21	□□□□□ -0.61
SNRNP70-208	ENST00000599687	HOXA10	P31260	410 aa	Predicted RBP	11.21	□□□□□ -0.61
SNRNP70-208	ENST00000599687	RPIA	P49247	311 aa		11.21	□□□□□ -0.61
SNRNP70-208	ENST00000599687	KCNH2	Q12809	1159 aa		11.21	□□□□□ -0.61
SNRNP70-208	ENST00000599687		Q3C1V9	767 aa		11.21	□□□□□ -0.61
SNRNP70-208	ENST00000599687	PLA2G2C	Q5R387	149 aa		11.21	□□□□□ -0.61
SNRNP70-208	ENST00000599687	RNF19B	Q6ZMZ0	732 aa		11.21	□□□□□ -0.61
SNRNP70-208	ENST00000599687	TSPYL6	Q8N831	410 aa		11.21	□□□□□ -0.61
SNRNP70-208	ENST00000599687	TSR2	Q969E8	191 aa	Known RBP	11.21	□□□□□ -0.61
SNRNP70-208	ENST00000599687	TAOK3	Q9H2K8	898 aa		11.21	□□□□□ -0.61
SNRNP70-208	ENST00000599687	PHAX	Q9H814	394 aa	Known RBP	11.21	□□□□□ -0.61
SNRNP70-208	ENST00000599687	CEP126	Q9P2H0	1117 aa		11.21	□□□□□ -0.61
SNRNP70-208	ENST00000599687	BIN2	Q9UBW5	565 aa	Predicted RBP	11.21	□□□□□ -0.61
SNRNP70-208	ENST00000599687	DICER1	Q9UPY3	1922 aa	Known RBP	11.21	□□□□□ -0.62
SNRNP70-208	ENST00000599687	IL16	Q14005	1332 aa		11.2	□□□□□ -0.62
SNRNP70-208	ENST00000599687	RNF123	Q5XPI4	1314 aa		11.2	□□□□□ -0.62
SNRNP70-208	ENST00000599687	GLTPD2	A6NH11	291 aa		11.2	□□□□□ -0.62
SNRNP70-208	ENST00000599687	ATP5J2-PTCD1	G3V325	749 aa		11.2	□□□□□ -0.62
SNRNP70-208	ENST00000599687	CCDC93	Q567U6	631 aa		11.2	□□□□□ -0.62
SNRNP70-208	ENST00000599687	OLFM4	Q6UX06	510 aa		11.2	□□□□□ -0.62
SNRNP70-208	ENST00000599687	FAM9B	Q8IZU0	186 aa		11.2	□□□□□ -0.62
SNRNP70-208	ENST00000599687	SYNE4	Q8N205	404 aa		11.2	□□□□□ -0.62
SNRNP70-208	ENST00000599687	RPGR	Q92834	1020 aa	Known RBP	11.2	□□□□□ -0.62
SNRNP70-208	ENST00000599687	NLRP3	Q96P20	1036 aa		11.2	□□□□□ -0.62
SNRNP70-208	ENST00000599687	CRAMP1	Q96RY5	1269 aa		11.2	□□□□□ -0.62
SNRNP70-208	ENST00000599687	ISCA1	Q9BUE6	129 aa		11.2	□□□□□ -0.62
SNRNP70-208	ENST00000599687	RRAGC	Q9HB90	399 aa		11.2	□□□□□ -0.62
SNRNP70-208	ENST00000599687	TRMT112	Q9UI30	125 aa	Known RBP	11.2	□□□□□ -0.62
SNRNP70-208	ENST00000599687	TIAM2	Q8IVF5	1701 aa		11.2	□□□□□ -0.62
SNRNP70-208	ENST00000599687	TOMM70	O94826	608 aa		11.19	□□□□□ -0.62
SNRNP70-208	ENST00000599687	SMCP	P49901	116 aa	Predicted RBP	11.19	□□□□□ -0.62
SNRNP70-208	ENST00000599687	DPYD	Q12882	1025 aa		11.19	□□□□□ -0.62
SNRNP70-208	ENST00000599687	SLFNL1	Q499Z3	407 aa		11.19	□□□□□ -0.62
SNRNP70-208	ENST00000599687	CCDC30	Q5VVM6	783 aa		11.19	□□□□□ -0.62
SNRNP70-208	ENST00000599687	RNF135	Q8IUD6	432 aa		11.19	□□□□□ -0.62
SNRNP70-208	ENST00000599687	NPAS4	Q8IUM7	802 aa		11.19	□□□□□ -0.62
SNRNP70-208	ENST00000599687	WDR63	Q8IWG1	891 aa		11.19	□□□□□ -0.62
SNRNP70-208	ENST00000599687	PHTF2	Q8N3S3	785 aa		11.19	□□□□□ -0.62
SNRNP70-208	ENST00000599687	PLPP7	Q8NBV4	271 aa		11.19	□□□□□ -0.62
SNRNP70-208	ENST00000599687	RBM17	Q96I25	401 aa	Known RBP	11.19	□□□□□ -0.62
SNRNP70-208	ENST00000599687	CHMP4A	Q9BY43	222 aa		11.19	□□□□□ -0.62
SNRNP70-208	ENST00000599687	TOR4A	Q9NXH8	423 aa		11.19	□□□□□ -0.62
SNRNP70-208	ENST00000599687	SALL2	Q9Y467	1007 aa	Predicted RBP	11.19	□□□□□ -0.62
SNRNP70-208	ENST00000599687	LAMB2	P55268	1798 aa		11.18	□□□□□ -0.62
SNRNP70-208	ENST00000599687	ANKRD33B	A6NCL7	494 aa		11.18	□□□□□ -0.62
SNRNP70-208	ENST00000599687	HCLS1	P14317	486 aa	Predicted RBP	11.18	□□□□□ -0.62
SNRNP70-208	ENST00000599687	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
SNRNP70-208	ENST00000599687	TRIM28	Q13263	835 aa	Known RBP	11.18	□□□□□ -0.62
SNRNP70-208	ENST00000599687	RTKN2	Q8IZC4	609 aa		11.18	□□□□□ -0.62
SNRNP70-208	ENST00000599687	SNED1	Q8TER0	1413 aa		11.18	□□□□□ -0.62
SNRNP70-208	ENST00000599687	SH3TC1	Q8TE82	1336 aa		11.17	□□□□□ -0.62
SNRNP70-208	ENST00000599687	TWISTNB	Q3B726	338 aa	Predicted RBP	11.17	□□□□□ -0.62
SNRNP70-208	ENST00000599687	CC2D2B	Q6DHV5	1058 aa		11.17	□□□□□ -0.62
SNRNP70-208	ENST00000599687	OGFOD1	Q8N543	542 aa		11.17	□□□□□ -0.62
SNRNP70-208	ENST00000599687	ZNF594	Q96JF6	807 aa	Predicted RBP	11.17	□□□□□ -0.62
SNRNP70-208	ENST00000599687	SPSB2	Q99619	263 aa		11.17	□□□□□ -0.62
SNRNP70-208	ENST00000599687	TTC24	A2A3L6	582 aa	Predicted RBP	11.16	□□□□□ -0.62
SNRNP70-208	ENST00000599687	TCERG1	O14776	1098 aa	Known RBP	11.16	□□□□□ -0.62
SNRNP70-208	ENST00000599687	VEGFA	P15692	232 aa	Predicted RBP	11.16	□□□□□ -0.62
SNRNP70-208	ENST00000599687	CLDN10	P78369	228 aa		11.16	□□□□□ -0.62
SNRNP70-208	ENST00000599687	FAM89A	Q96GI7	184 aa		11.16	□□□□□ -0.62
SNRNP70-208	ENST00000599687	OCSTAMP	Q9BR26	566 aa		11.16	□□□□□ -0.62
SNRNP70-208	ENST00000599687	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.16	□□□□□ -0.62
SNRNP70-208	ENST00000599687	DDX60	Q8IY21	1712 aa	Known RBP	11.15	□□□□□ -0.62
SNRNP70-208	ENST00000599687	FANCI	Q9NVI1	1328 aa		11.15	□□□□□ -0.62
SNRNP70-208	ENST00000599687	TCF3	P15923	654 aa		11.15	□□□□□ -0.62
SNRNP70-208	ENST00000599687	HSPA6	P17066	643 aa		11.15	□□□□□ -0.62
SNRNP70-208	ENST00000599687	IARS	P41252	1262 aa	Known RBP	11.15	□□□□□ -0.62
SNRNP70-208	ENST00000599687	SWI5	Q1ZZU3	235 aa		11.15	□□□□□ -0.62
SNRNP70-208	ENST00000599687	SLC51A	Q86UW1	340 aa		11.15	□□□□□ -0.62
SNRNP70-208	ENST00000599687	SCUBE3	Q8IX30	993 aa		11.15	□□□□□ -0.62
SNRNP70-208	ENST00000599687	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.15	□□□□□ -0.62
SNRNP70-208	ENST00000599687	PSMD1	Q99460	953 aa		11.15	□□□□□ -0.62
SNRNP70-208	ENST00000599687	MYD88	Q99836	296 aa		11.15	□□□□□ -0.62
SNRNP70-208	ENST00000599687	USB1	Q9BQ65	265 aa	Known RBP	11.15	□□□□□ -0.62
SNRNP70-208	ENST00000599687	METTL22	Q9BUU2	404 aa	Predicted RBP	11.15	□□□□□ -0.62
SNRNP70-208	ENST00000599687	SENP2	Q9HC62	589 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms