RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 CEBPZQ03701 1054 aaKnown RBP16.98■□□□□ 0.31
VRK3-217ENST00000599538 ILDR1Q86SU0 546 aaPredicted RBP16.98■□□□□ 0.31
VRK3-217ENST00000599538 PGBD1Q96JS3 809 aa16.98■□□□□ 0.31
VRK3-217ENST00000599538 GIMAP6Q6P9H5 292 aa16.97■□□□□ 0.31
VRK3-217ENST00000599538 RIOK1Q9BRS2 568 aaKnown RBP16.97■□□□□ 0.31
VRK3-217ENST00000599538 MYL10Q9BUA6 226 aa16.97■□□□□ 0.31
VRK3-217ENST00000599538 TSPY26PQ9H489 355 aa16.97■□□□□ 0.31
VRK3-217ENST00000599538 BRWD3Q6RI45 1802 aa16.97■□□□□ 0.31
VRK3-217ENST00000599538 AKNAD1Q5T1N1 836 aa16.97■□□□□ 0.31
VRK3-217ENST00000599538 APOA5Q6Q788 366 aa16.97■□□□□ 0.31
VRK3-217ENST00000599538 CCDC144CPQ8IYA2 1237 aa16.97■□□□□ 0.31
VRK3-217ENST00000599538 SCAND2PQ9GZW5 306 aaPredicted RBP16.97■□□□□ 0.31
VRK3-217ENST00000599538 ZSCAN16Q9H4T2 348 aaPredicted RBP16.97■□□□□ 0.31
VRK3-217ENST00000599538 LY9Q9HBG7 655 aa16.97■□□□□ 0.31
VRK3-217ENST00000599538 UBR3Q6ZT12 1888 aa16.96■□□□□ 0.31
VRK3-217ENST00000599538 MAGEB6P1A0A0J9YX57 407 aa16.96■□□□□ 0.31
VRK3-217ENST00000599538 GYS1P13807 737 aa16.96■□□□□ 0.31
VRK3-217ENST00000599538 GNAT2P19087 354 aa16.96■□□□□ 0.31
VRK3-217ENST00000599538 CDC27P30260 824 aa16.96■□□□□ 0.31
VRK3-217ENST00000599538 RRP12Q5JTH9 1297 aaKnown RBP16.96■□□□□ 0.31
VRK3-217ENST00000599538 PRR5LQ6MZQ0 368 aa16.96■□□□□ 0.31
VRK3-217ENST00000599538 CNBD1Q8NA66 436 aa16.96■□□□□ 0.31
VRK3-217ENST00000599538 ZKSCAN3Q9BRR0 538 aa16.96■□□□□ 0.31
VRK3-217ENST00000599538 RRAGDQ9NQL2 400 aaPredicted RBP16.96■□□□□ 0.31
VRK3-217ENST00000599538 ORC3Q9UBD5 711 aaPredicted RBP16.96■□□□□ 0.31
VRK3-217ENST00000599538 IRS2Q9Y4H2 1338 aa16.96■□□□□ 0.31
VRK3-217ENST00000599538 HIBADHP31937 336 aaKnown RBP16.96■□□□□ 0.3
VRK3-217ENST00000599538 AIFM3Q96NN9 605 aa16.96■□□□□ 0.3
VRK3-217ENST00000599538 PRDX5P30044 214 aa16.95■□□□□ 0.3
VRK3-217ENST00000599538 CHAF1AQ13111 956 aaPredicted RBP16.95■□□□□ 0.3
VRK3-217ENST00000599538 TMEM67Q5HYA8 995 aa16.95■□□□□ 0.3
VRK3-217ENST00000599538 MFSD6Q6ZSS7 791 aa16.95■□□□□ 0.3
VRK3-217ENST00000599538 MICU3Q86XE3 530 aa16.95■□□□□ 0.3
VRK3-217ENST00000599538 PPP1R9BQ96SB3 815 aa16.95■□□□□ 0.3
VRK3-217ENST00000599538 NACAP1Q9BZK3 213 aa16.95■□□□□ 0.3
VRK3-217ENST00000599538 ANKRD2Q9GZV1 360 aa16.95■□□□□ 0.3
VRK3-217ENST00000599538 TIAM2Q8IVF5 1701 aa16.95■□□□□ 0.3
VRK3-217ENST00000599538 MYH15Q9Y2K3 1946 aa16.95■□□□□ 0.3
VRK3-217ENST00000599538 CYP2D7A0A087X1C5 515 aa16.94■□□□□ 0.3
VRK3-217ENST00000599538 CPLX1O14810 134 aa16.94■□□□□ 0.3
VRK3-217ENST00000599538 EVX2Q03828 476 aa16.94■□□□□ 0.3
VRK3-217ENST00000599538 KRT27Q7Z3Y8 459 aa16.94■□□□□ 0.3
VRK3-217ENST00000599538 PROM2Q8N271 834 aa16.94■□□□□ 0.3
VRK3-217ENST00000599538 STAG1Q8WVM7 1258 aa16.94■□□□□ 0.3
VRK3-217ENST00000599538 TMEM87BQ96K49 555 aa16.94■□□□□ 0.3
VRK3-217ENST00000599538 GPR101Q96P66 508 aaPredicted RBP16.94■□□□□ 0.3
VRK3-217ENST00000599538 USP28Q96RU2 1077 aa16.94■□□□□ 0.3
VRK3-217ENST00000599538 TOMM22Q9NS69 142 aa16.94■□□□□ 0.3
VRK3-217ENST00000599538 FAM217BQ9NTX9 383 aaPredicted RBP16.94■□□□□ 0.3
VRK3-217ENST00000599538 KIF3AQ9Y496 699 aa16.94■□□□□ 0.3
VRK3-217ENST00000599538 BAZ2AQ9UIF9 1905 aaKnown RBP16.94■□□□□ 0.3
VRK3-217ENST00000599538 MINDY4BA8MYZ0 360 aa16.94■□□□□ 0.3
VRK3-217ENST00000599538 UBE2Q2LH0YL09 131 aa16.94■□□□□ 0.3
VRK3-217ENST00000599538 METAP2P50579 478 aaKnown RBP eCLIP16.94■□□□□ 0.3
VRK3-217ENST00000599538 MECOMQ03112 1051 aa16.94■□□□□ 0.3
VRK3-217ENST00000599538 PPARAQ07869 468 aa16.94■□□□□ 0.3
VRK3-217ENST00000599538 NSUN4Q96CB9 384 aaKnown RBP16.94■□□□□ 0.3
VRK3-217ENST00000599538 MYH13Q9UKX3 1938 aa16.94■□□□□ 0.3
VRK3-217ENST00000599538 IFIT3O14879 490 aaKnown RBP16.93■□□□□ 0.3
VRK3-217ENST00000599538 DHX16O60231 1041 aaKnown RBP16.93■□□□□ 0.3
VRK3-217ENST00000599538 CCDC173Q0VFZ6 552 aa16.93■□□□□ 0.3
VRK3-217ENST00000599538 GRAPQ13588 217 aa16.93■□□□□ 0.3
VRK3-217ENST00000599538 GRAPLQ8TC17 118 aaPredicted RBP16.93■□□□□ 0.3
VRK3-217ENST00000599538 PHKBQ93100 1093 aa16.93■□□□□ 0.3
VRK3-217ENST00000599538 FUCA2Q9BTY2 467 aa16.93■□□□□ 0.3
VRK3-217ENST00000599538 TAOK2Q9UL54 1235 aa16.93■□□□□ 0.3
VRK3-217ENST00000599538 ADRA2BP18089 450 aa16.93■□□□□ 0.3
VRK3-217ENST00000599538 CAMK4Q16566 473 aa16.93■□□□□ 0.3
VRK3-217ENST00000599538 NFXL1Q6ZNB6 911 aa16.93■□□□□ 0.3
VRK3-217ENST00000599538 SGMS1Q86VZ5 419 aa16.93■□□□□ 0.3
VRK3-217ENST00000599538 C8orf76Q96K31 380 aa16.93■□□□□ 0.3
VRK3-217ENST00000599538 DACT1Q9NYF0 836 aa16.93■□□□□ 0.3
VRK3-217ENST00000599538 FBXO18Q8NFZ0 1043 aa16.92■□□□□ 0.3
VRK3-217ENST00000599538 ANKIB1Q9P2G1 1089 aa16.92■□□□□ 0.3
VRK3-217ENST00000599538 SEMA3EO15041 775 aa16.91■□□□□ 0.3
VRK3-217ENST00000599538 ZBTB43O43298 467 aa16.91■□□□□ 0.3
VRK3-217ENST00000599538 RANBP6O60518 1105 aaKnown RBP16.91■□□□□ 0.3
VRK3-217ENST00000599538 NR1I2O75469 434 aa16.91■□□□□ 0.3
VRK3-217ENST00000599538 SERPINB2P05120 415 aa16.91■□□□□ 0.3
VRK3-217ENST00000599538 NTRK3Q16288 839 aa16.91■□□□□ 0.3
VRK3-217ENST00000599538 FAM43AQ8N2R8 423 aa16.91■□□□□ 0.3
VRK3-217ENST00000599538 KRT23Q9C075 422 aa16.91■□□□□ 0.3
VRK3-217ENST00000599538 CNNM2Q9H8M5 875 aa16.91■□□□□ 0.3
VRK3-217ENST00000599538 CFAP45Q9UL16 551 aa16.91■□□□□ 0.3
VRK3-217ENST00000599538 GOLGA6L4A6NEF3 574 aa16.91■□□□□ 0.3
VRK3-217ENST00000599538 KIF28PB7ZC32 967 aa16.91■□□□□ 0.3
VRK3-217ENST00000599538 POLR3DP05423 398 aaPredicted RBP16.91■□□□□ 0.3
VRK3-217ENST00000599538 LIFRP42702 1097 aa16.91■□□□□ 0.3
VRK3-217ENST00000599538 DDR1Q08345 913 aa16.91■□□□□ 0.3
VRK3-217ENST00000599538 CHMP4CQ96CF2 233 aa16.91■□□□□ 0.3
VRK3-217ENST00000599538 AATFQ9NY61 560 aaKnown RBP eCLIP16.91■□□□□ 0.3
VRK3-217ENST00000599538 RCOR1Q9UKL0 485 aa16.9■□□□□ 0.3
VRK3-217ENST00000599538 GOLGA8AA7E2F4 631 aa16.9■□□□□ 0.3
VRK3-217ENST00000599538 LETM1O95202 739 aaPredicted RBP16.9■□□□□ 0.3
VRK3-217ENST00000599538 GRIK5Q16478 980 aa16.9■□□□□ 0.3
VRK3-217ENST00000599538 SLC27A3Q5K4L6 730 aa16.9■□□□□ 0.3
VRK3-217ENST00000599538 BICD2Q8TD16 824 aa16.9■□□□□ 0.3
VRK3-217ENST00000599538 ANP32BQ92688 251 aaKnown RBP16.9■□□□□ 0.3
VRK3-217ENST00000599538 PRDM1O75626 825 aa16.89■□□□□ 0.29
VRK3-217ENST00000599538 TXNRD1Q16881 649 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms