RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 SALL1Q9NSC2 1324 aa28.41■■■□□ 2.14
CCDC61-207ENST00000599044 A0A1B0GUL7 405 aa28.4■■■□□ 2.14
CCDC61-207ENST00000599044 RASGRF1Q13972 1273 aa28.4■■■□□ 2.14
CCDC61-207ENST00000599044 SEMA3EO15041 775 aa28.39■■■□□ 2.14
CCDC61-207ENST00000599044 NFIAQ12857 509 aa28.39■■■□□ 2.14
CCDC61-207ENST00000599044 ZKSCAN2Q63HK3 967 aa28.39■■■□□ 2.14
CCDC61-207ENST00000599044 XAGE2Q96GT9 111 aa28.39■■■□□ 2.14
CCDC61-207ENST00000599044 HPS5Q9UPZ3 1129 aa28.39■■■□□ 2.14
CCDC61-207ENST00000599044 TCP10Q12799 353 aa28.38■■■□□ 2.13
CCDC61-207ENST00000599044 MIGA2Q7L4E1 593 aa28.38■■■□□ 2.13
CCDC61-207ENST00000599044 ZKSCAN4Q969J2 545 aaPredicted RBP28.38■■■□□ 2.13
CCDC61-207ENST00000599044 SNCAIPQ9Y6H5 919 aa28.38■■■□□ 2.13
CCDC61-207ENST00000599044 ZBTB22O15209 634 aa28.37■■■□□ 2.13
CCDC61-207ENST00000599044 SOX10P56693 466 aa28.37■■■□□ 2.13
CCDC61-207ENST00000599044 CRHR2Q13324 411 aa28.37■■■□□ 2.13
CCDC61-207ENST00000599044 FAM151AQ8WW52 585 aa28.37■■■□□ 2.13
CCDC61-207ENST00000599044 BRI3BPQ8WY22 251 aa28.37■■■□□ 2.13
CCDC61-207ENST00000599044 OTUD5Q96G74 571 aa28.37■■■□□ 2.13
CCDC61-207ENST00000599044 WRNIP1Q96S55 665 aa28.37■■■□□ 2.13
CCDC61-207ENST00000599044 USP40Q9NVE5 1235 aa28.37■■■□□ 2.13
CCDC61-207ENST00000599044 FAM198AQ9UFP1 575 aa28.37■■■□□ 2.13
CCDC61-207ENST00000599044 CSADQ9Y600 493 aa28.37■■■□□ 2.13
CCDC61-207ENST00000599044 ZFPM1Q8IX07 1006 aa28.36■■■□□ 2.13
CCDC61-207ENST00000599044 PKN2Q16513 984 aaKnown RBP28.35■■■□□ 2.13
CCDC61-207ENST00000599044 NEUROD6Q96NK8 337 aa28.35■■■□□ 2.13
CCDC61-207ENST00000599044 AKAP2Q9Y2D5 859 aa28.35■■■□□ 2.13
CCDC61-207ENST00000599044 ABCF2Q9UG63 623 aa28.34■■■□□ 2.13
CCDC61-207ENST00000599044 RPAP1Q9BWH6 1393 aaPredicted RBP28.34■■■□□ 2.13
CCDC61-207ENST00000599044 SPDYE5A6NIY4 337 aa28.33■■■□□ 2.13
CCDC61-207ENST00000599044 RLBP1P12271 317 aa28.33■■■□□ 2.13
CCDC61-207ENST00000599044 CAP1Q01518 475 aa28.33■■■□□ 2.13
CCDC61-207ENST00000599044 CCL15-CCL14A0A0B4J2E2 113 aa28.32■■■□□ 2.12
CCDC61-207ENST00000599044 INPP5BP32019 993 aa28.32■■■□□ 2.12
CCDC61-207ENST00000599044 MVPQ14764 893 aaKnown RBP28.32■■■□□ 2.12
CCDC61-207ENST00000599044 CCL15Q16663 113 aa28.32■■■□□ 2.12
CCDC61-207ENST00000599044 OTUD7BQ6GQQ9 843 aa28.32■■■□□ 2.12
CCDC61-207ENST00000599044 PI16Q6UXB8 463 aa28.32■■■□□ 2.12
CCDC61-207ENST00000599044 C1orf115Q9H7X2 142 aa28.32■■■□□ 2.12
CCDC61-207ENST00000599044 GTF2A2P52657 109 aa28.31■■■□□ 2.12
CCDC61-207ENST00000599044 FBXO46Q6PJ61 603 aaPredicted RBP28.31■■■□□ 2.12
CCDC61-207ENST00000599044 FAM43AQ8N2R8 423 aa28.31■■■□□ 2.12
CCDC61-207ENST00000599044 ZNF384Q8TF68 577 aa28.31■■■□□ 2.12
CCDC61-207ENST00000599044 HOOK2Q96ED9 719 aa28.31■■■□□ 2.12
CCDC61-207ENST00000599044 ZNF341Q9BYN7 854 aa28.31■■■□□ 2.12
CCDC61-207ENST00000599044 HMG20BQ9P0W2 317 aa28.31■■■□□ 2.12
CCDC61-207ENST00000599044 GAKO14976 1311 aa28.31■■■□□ 2.12
CCDC61-207ENST00000599044 PDS5AQ29RF7 1337 aaKnown RBP28.31■■■□□ 2.12
CCDC61-207ENST00000599044 G3BP1Q13283 466 aaKnown RBP eCLIP28.3■■■□□ 2.12
CCDC61-207ENST00000599044 POLA2Q14181 598 aa28.3■■■□□ 2.12
CCDC61-207ENST00000599044 DCAF15Q66K64 600 aa28.3■■■□□ 2.12
CCDC61-207ENST00000599044 ERO1BQ86YB8 467 aa28.3■■■□□ 2.12
CCDC61-207ENST00000599044 ZGPATQ8N5A5 531 aaKnown RBP28.3■■■□□ 2.12
CCDC61-207ENST00000599044 IRF6O14896 467 aa28.29■■■□□ 2.12
CCDC61-207ENST00000599044 OTOP1Q7RTM1 612 aa28.29■■■□□ 2.12
CCDC61-207ENST00000599044 DZIP1Q86YF9 867 aaKnown RBP28.29■■■□□ 2.12
CCDC61-207ENST00000599044 CD99L2Q8TCZ2 262 aa28.29■■■□□ 2.12
CCDC61-207ENST00000599044 ZNF112Q9UJU3 913 aa28.29■■■□□ 2.12
CCDC61-207ENST00000599044 TRIM17Q9Y577 477 aa28.29■■■□□ 2.12
CCDC61-207ENST00000599044 HTTP42858 3142 aa28.28■■■□□ 2.12
CCDC61-207ENST00000599044 ATP8B2P98198 1209 aa28.28■■■□□ 2.12
CCDC61-207ENST00000599044 TBC1D9Q6ZT07 1266 aa28.28■■■□□ 2.12
CCDC61-207ENST00000599044 ZBTB7BO15156 539 aaPredicted RBP28.27■■■□□ 2.12
CCDC61-207ENST00000599044 SLURP2P0DP57 97 aa28.27■■■□□ 2.12
CCDC61-207ENST00000599044 RGS3P49796 1198 aa28.27■■■□□ 2.12
CCDC61-207ENST00000599044 MECOMQ03112 1051 aa28.27■■■□□ 2.12
CCDC61-207ENST00000599044 SH3BP5LQ7L8J4 393 aa28.27■■■□□ 2.12
CCDC61-207ENST00000599044 FAM163AQ96GL9 167 aaPredicted RBP28.27■■■□□ 2.12
CCDC61-207ENST00000599044 SLC34A2O95436 690 aa28.26■■■□□ 2.11
CCDC61-207ENST00000599044 GORABQ5T7V8 394 aa28.26■■■□□ 2.11
CCDC61-207ENST00000599044 SPATA5Q8NB90 893 aa28.26■■■□□ 2.11
CCDC61-207ENST00000599044 SSH3Q8TE77 659 aa28.26■■■□□ 2.11
CCDC61-207ENST00000599044 IDI2Q9BXS1 227 aa28.26■■■□□ 2.11
CCDC61-207ENST00000599044 DDX4Q9NQI0 724 aaKnown RBP28.26■■■□□ 2.11
CCDC61-207ENST00000599044 RFX7Q2KHR2 1363 aa28.25■■■□□ 2.11
CCDC61-207ENST00000599044 ZBED9Q6R2W3 1325 aa28.25■■■□□ 2.11
CCDC61-207ENST00000599044 WDHD1O75717 1129 aaPredicted RBP28.25■■■□□ 2.11
CCDC61-207ENST00000599044 BTDP43251 543 aa28.25■■■□□ 2.11
CCDC61-207ENST00000599044 SP3Q02447 781 aa28.25■■■□□ 2.11
CCDC61-207ENST00000599044 PPIL2Q13356 520 aa28.25■■■□□ 2.11
CCDC61-207ENST00000599044 TAF1CQ15572 869 aaPredicted RBP28.25■■■□□ 2.11
CCDC61-207ENST00000599044 SPTY2D1Q68D10 685 aaPredicted RBP28.25■■■□□ 2.11
CCDC61-207ENST00000599044 ITPRIPQ8IWB1 547 aa28.25■■■□□ 2.11
CCDC61-207ENST00000599044 FTSJ3Q8IY81 847 aaKnown RBP28.25■■■□□ 2.11
CCDC61-207ENST00000599044 ATRNL1Q5VV63 1379 aa28.24■■■□□ 2.11
CCDC61-207ENST00000599044 MROH7-TTC4A0A0A0MT08 1334 aa28.24■■■□□ 2.11
CCDC61-207ENST00000599044 MYH2Q9UKX2 1941 aa28.24■■■□□ 2.11
CCDC61-207ENST00000599044 BTBD19C9JJ37 291 aa28.24■■■□□ 2.11
CCDC61-207ENST00000599044 ARID4AP29374 1257 aaPredicted RBP28.24■■■□□ 2.11
CCDC61-207ENST00000599044 MCAMP43121 646 aa28.24■■■□□ 2.11
CCDC61-207ENST00000599044 ERICH6Q7L0X2 663 aa28.24■■■□□ 2.11
CCDC61-207ENST00000599044 CETPP11597 493 aa28.23■■■□□ 2.11
CCDC61-207ENST00000599044 PPATQ06203 517 aa28.23■■■□□ 2.11
CCDC61-207ENST00000599044 SNAPC2Q13487 334 aa28.23■■■□□ 2.11
CCDC61-207ENST00000599044 ERO1AQ96HE7 468 aa28.23■■■□□ 2.11
CCDC61-207ENST00000599044 RBBP6Q7Z6E9 1792 aaKnown RBP28.22■■■□□ 2.11
CCDC61-207ENST00000599044 GPR75-ASB3A0A0A6YYF3 556 aa28.22■■■□□ 2.11
CCDC61-207ENST00000599044 DDTLA6NHG4 134 aaPredicted RBP28.22■■■□□ 2.11
CCDC61-207ENST00000599044 PHF20L1A8MW92 1017 aa28.22■■■□□ 2.11
CCDC61-207ENST00000599044 ENTPD3O75355 529 aa28.22■■■□□ 2.11
CCDC61-207ENST00000599044 RHBDL3P58872 404 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms