RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 ZNF408Q9H9D4 720 aa21.58■■□□□ 1.05
USHBP1-209ENST00000598570 MROH7-TTC4A0A0A0MT08 1334 aa21.57■■□□□ 1.04
USHBP1-209ENST00000598570 RHBDL3P58872 404 aa21.57■■□□□ 1.04
USHBP1-209ENST00000598570 PPP4CP60510 307 aa21.57■■□□□ 1.04
USHBP1-209ENST00000598570 GSTO1P78417 241 aa21.57■■□□□ 1.04
USHBP1-209ENST00000598570 NBPF12Q5TAG4 269 aaPredicted RBP21.57■■□□□ 1.04
USHBP1-209ENST00000598570 RGMBQ6NW40 437 aa21.57■■□□□ 1.04
USHBP1-209ENST00000598570 VEZTQ9HBM0 779 aa21.57■■□□□ 1.04
USHBP1-209ENST00000598570 PIH1D3Q9NQM4 214 aaKnown RBP21.57■■□□□ 1.04
USHBP1-209ENST00000598570 SNRKQ9NRH2 765 aa21.57■■□□□ 1.04
USHBP1-209ENST00000598570 DOCK2Q92608 1830 aa21.57■■□□□ 1.04
USHBP1-209ENST00000598570 LDHCP07864 332 aa21.56■■□□□ 1.04
USHBP1-209ENST00000598570 NF2P35240 595 aa21.56■■□□□ 1.04
USHBP1-209ENST00000598570 TNNI2P48788 182 aa21.56■■□□□ 1.04
USHBP1-209ENST00000598570 DZIP1Q86YF9 867 aaKnown RBP21.56■■□□□ 1.04
USHBP1-209ENST00000598570 FAM151AQ8WW52 585 aa21.56■■□□□ 1.04
USHBP1-209ENST00000598570 CCDC102AQ96A19 550 aa21.56■■□□□ 1.04
USHBP1-209ENST00000598570 FAM198AQ9UFP1 575 aa21.56■■□□□ 1.04
USHBP1-209ENST00000598570 USP2O75604 605 aaPredicted RBP21.55■■□□□ 1.04
USHBP1-209ENST00000598570 IFIT2P09913 472 aaKnown RBP21.55■■□□□ 1.04
USHBP1-209ENST00000598570 CYP4F22Q6NT55 531 aa21.55■■□□□ 1.04
USHBP1-209ENST00000598570 USP40Q9NVE5 1235 aa21.55■■□□□ 1.04
USHBP1-209ENST00000598570 TCP10L2B9ZVM9 353 aa21.54■■□□□ 1.04
USHBP1-209ENST00000598570 ENTPD3O75355 529 aa21.54■■□□□ 1.04
USHBP1-209ENST00000598570 WDHD1O75717 1129 aaPredicted RBP21.54■■□□□ 1.04
USHBP1-209ENST00000598570 MAP3K10Q02779 954 aa21.54■■□□□ 1.04
USHBP1-209ENST00000598570 MOB2Q70IA6 237 aa21.54■■□□□ 1.04
USHBP1-209ENST00000598570 TMEM39BQ9GZU3 492 aa21.54■■□□□ 1.04
USHBP1-209ENST00000598570 WBP1LQ9NX94 342 aa21.54■■□□□ 1.04
USHBP1-209ENST00000598570 LRP2BPQ9P2M1 347 aa21.54■■□□□ 1.04
USHBP1-209ENST00000598570 MAST2Q6P0Q8 1798 aa21.53■■□□□ 1.04
USHBP1-209ENST00000598570 UBE2Q2LH0YL09 131 aa21.53■■□□□ 1.04
USHBP1-209ENST00000598570 SLC10A3P09131 477 aa21.53■■□□□ 1.04
USHBP1-209ENST00000598570 CACNB3P54284 484 aa21.53■■□□□ 1.04
USHBP1-209ENST00000598570 NFIAQ12857 509 aa21.53■■□□□ 1.04
USHBP1-209ENST00000598570 CDAN1Q8IWY9 1227 aa21.53■■□□□ 1.04
USHBP1-209ENST00000598570 TMOD2Q9NZR1 351 aa21.53■■□□□ 1.04
USHBP1-209ENST00000598570 APBB1O00213 710 aa21.52■■□□□ 1.04
USHBP1-209ENST00000598570 PPP1R12BO60237 982 aaPredicted RBP21.52■■□□□ 1.04
USHBP1-209ENST00000598570 NOGQ13253 232 aa21.52■■□□□ 1.04
USHBP1-209ENST00000598570 ARMC9Q7Z3E5 817 aa21.52■■□□□ 1.04
USHBP1-209ENST00000598570 EXOC6Q8TAG9 804 aa21.52■■□□□ 1.04
USHBP1-209ENST00000598570 GCC1Q96CN9 775 aa21.52■■□□□ 1.04
USHBP1-209ENST00000598570 HAUS7Q99871 368 aa21.52■■□□□ 1.04
USHBP1-209ENST00000598570 ANTXR1Q9H6X2 564 aa21.52■■□□□ 1.04
USHBP1-209ENST00000598570 LAMB1P07942 1786 aa21.51■■□□□ 1.03
USHBP1-209ENST00000598570 ATRNL1Q5VV63 1379 aa21.51■■□□□ 1.03
USHBP1-209ENST00000598570 SMARCA5O60264 1052 aaPredicted RBP21.51■■□□□ 1.03
USHBP1-209ENST00000598570 BTDP43251 543 aa21.51■■□□□ 1.03
USHBP1-209ENST00000598570 TTF1Q15361 905 aaPredicted RBP21.51■■□□□ 1.03
USHBP1-209ENST00000598570 SMC5Q8IY18 1101 aa21.51■■□□□ 1.03
USHBP1-209ENST00000598570 RAI14Q9P0K7 980 aa21.51■■□□□ 1.03
USHBP1-209ENST00000598570 SALL3Q9BXA9 1300 aa21.51■■□□□ 1.03
USHBP1-209ENST00000598570 COL2A1P02458 1487 aaPredicted RBP21.51■■□□□ 1.03
USHBP1-209ENST00000598570 NAA16Q6N069 864 aaPredicted RBP21.5■■□□□ 1.03
USHBP1-209ENST00000598570 ADGRA1Q86SQ6 560 aa21.5■■□□□ 1.03
USHBP1-209ENST00000598570 RASAL3Q86YV0 1011 aa21.5■■□□□ 1.03
USHBP1-209ENST00000598570 HOOK2Q96ED9 719 aa21.5■■□□□ 1.03
USHBP1-209ENST00000598570 ZNF112Q9UJU3 913 aa21.5■■□□□ 1.03
USHBP1-209ENST00000598570 ZNF157P51786 506 aaPredicted RBP21.49■■□□□ 1.03
USHBP1-209ENST00000598570 MAP2K1Q02750 393 aaPredicted RBP21.49■■□□□ 1.03
USHBP1-209ENST00000598570 ZFPM1Q8IX07 1006 aa21.49■■□□□ 1.03
USHBP1-209ENST00000598570 REM2Q8IYK8 340 aaPredicted RBP21.49■■□□□ 1.03
USHBP1-209ENST00000598570 DDX4Q9NQI0 724 aaKnown RBP21.49■■□□□ 1.03
USHBP1-209ENST00000598570 ECHDC1Q9NTX5 307 aa21.49■■□□□ 1.03
USHBP1-209ENST00000598570 AOC2O75106 756 aa21.48■■□□□ 1.03
USHBP1-209ENST00000598570 SH3BP5LQ7L8J4 393 aa21.48■■□□□ 1.03
USHBP1-209ENST00000598570 ZIC5Q96T25 663 aa21.48■■□□□ 1.03
USHBP1-209ENST00000598570 ANGEL1Q9UNK9 670 aaKnown RBP21.48■■□□□ 1.03
USHBP1-209ENST00000598570 NDUFB9Q9Y6M9 179 aa21.48■■□□□ 1.03
USHBP1-209ENST00000598570 TCRBV5S4A2TA0A5A2 114 aa21.47■■□□□ 1.03
USHBP1-209ENST00000598570 IREB2P48200 963 aaKnown RBP21.47■■□□□ 1.03
USHBP1-209ENST00000598570 RGS3P49796 1198 aa21.47■■□□□ 1.03
USHBP1-209ENST00000598570 MAP3K12Q12852 859 aa21.47■■□□□ 1.03
USHBP1-209ENST00000598570 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.47■■□□□ 1.03
USHBP1-209ENST00000598570 CERS3Q8IU89 383 aa21.47■■□□□ 1.03
USHBP1-209ENST00000598570 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.47■■□□□ 1.03
USHBP1-209ENST00000598570 FOCADQ5VW36 1801 aa21.47■■□□□ 1.03
USHBP1-209ENST00000598570 CDK5RAP2Q96SN8 1893 aa21.47■■□□□ 1.03
USHBP1-209ENST00000598570 BAG3O95817 575 aa21.46■■□□□ 1.03
USHBP1-209ENST00000598570 PLCG2P16885 1265 aa21.46■■□□□ 1.03
USHBP1-209ENST00000598570 ANKRD13AQ8IZ07 590 aa21.46■■□□□ 1.03
USHBP1-209ENST00000598570 RWDD1Q9H446 243 aaPredicted RBP21.46■■□□□ 1.03
USHBP1-209ENST00000598570 FZD1Q9UP38 647 aa21.46■■□□□ 1.03
USHBP1-209ENST00000598570 TTC41PQ6P2S7 1318 aa21.46■■□□□ 1.03
USHBP1-209ENST00000598570 OTOFQ9HC10 1997 aa21.45■■□□□ 1.02
USHBP1-209ENST00000598570 TBC1D12O60347 775 aa21.45■■□□□ 1.02
USHBP1-209ENST00000598570 IGHDP01880 384 aa21.45■■□□□ 1.02
USHBP1-209ENST00000598570 SPRYD7Q5W111 196 aa21.45■■□□□ 1.02
USHBP1-209ENST00000598570 METTL16Q86W50 562 aaKnown RBP21.45■■□□□ 1.02
USHBP1-209ENST00000598570 PAG1Q9NWQ8 432 aa21.45■■□□□ 1.02
USHBP1-209ENST00000598570 STAP2Q9UGK3 403 aa21.45■■□□□ 1.02
USHBP1-209ENST00000598570 IDH1O75874 414 aaKnown RBP21.44■■□□□ 1.02
USHBP1-209ENST00000598570 CYP7A1P22680 504 aa21.44■■□□□ 1.02
USHBP1-209ENST00000598570 TM4SF4P48230 202 aa21.44■■□□□ 1.02
USHBP1-209ENST00000598570 MAP3K9P80192 1104 aa21.44■■□□□ 1.02
USHBP1-209ENST00000598570 KIF23Q02241 960 aaPredicted RBP21.44■■□□□ 1.02
USHBP1-209ENST00000598570 TCP10Q12799 353 aa21.44■■□□□ 1.02
USHBP1-209ENST00000598570 TTLL12Q14166 644 aaPredicted RBP21.44■■□□□ 1.02
USHBP1-209ENST00000598570 SH3RF3Q8TEJ3 882 aaPredicted RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms