RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 TTC39AQ5SRH9 613 aa17.98■□□□□ 0.47
XRCC1-208ENST00000598422 CDC42EP5Q6NZY7 148 aa17.98■□□□□ 0.47
XRCC1-208ENST00000598422 ERICH6Q7L0X2 663 aa17.98■□□□□ 0.47
XRCC1-208ENST00000598422 WNK4Q96J92 1243 aa17.98■□□□□ 0.47
XRCC1-208ENST00000598422 COG6Q9Y2V7 657 aa17.98■□□□□ 0.47
XRCC1-208ENST00000598422 NOP58Q9Y2X3 529 aaKnown RBP17.98■□□□□ 0.47
XRCC1-208ENST00000598422 CSADQ9Y600 493 aa17.98■□□□□ 0.47
XRCC1-208ENST00000598422 RPAP1Q9BWH6 1393 aaPredicted RBP17.97■□□□□ 0.47
XRCC1-208ENST00000598422 MANSC4A6NHS7 340 aaPredicted RBP17.97■□□□□ 0.47
XRCC1-208ENST00000598422 ZBTB48P10074 688 aaPredicted RBP17.97■□□□□ 0.47
XRCC1-208ENST00000598422 ARID4AP29374 1257 aaPredicted RBP17.97■□□□□ 0.47
XRCC1-208ENST00000598422 TCP10Q12799 353 aa17.97■□□□□ 0.47
XRCC1-208ENST00000598422 CCDC158Q5M9N0 1113 aa17.97■□□□□ 0.47
XRCC1-208ENST00000598422 DCAF15Q66K64 600 aa17.97■□□□□ 0.47
XRCC1-208ENST00000598422 USP40Q9NVE5 1235 aa17.97■□□□□ 0.47
XRCC1-208ENST00000598422 HMG20BQ9P0W2 317 aa17.97■□□□□ 0.47
XRCC1-208ENST00000598422 ECM29Q5VYK3 1845 aa17.96■□□□□ 0.47
XRCC1-208ENST00000598422 HMMRO75330 724 aa17.96■□□□□ 0.47
XRCC1-208ENST00000598422 GSTO1P78417 241 aa17.96■□□□□ 0.47
XRCC1-208ENST00000598422 PI16Q6UXB8 463 aa17.96■□□□□ 0.47
XRCC1-208ENST00000598422 ERC1Q8IUD2 1116 aa17.96■□□□□ 0.47
XRCC1-208ENST00000598422 DBNDD2Q9BQY9 259 aa17.96■□□□□ 0.47
XRCC1-208ENST00000598422 ELP3Q9H9T3 547 aa17.96■□□□□ 0.47
XRCC1-208ENST00000598422 GAKO14976 1311 aa17.96■□□□□ 0.46
XRCC1-208ENST00000598422 TM4SF4P48230 202 aa17.95■□□□□ 0.46
XRCC1-208ENST00000598422 MAP3K9P80192 1104 aa17.95■□□□□ 0.46
XRCC1-208ENST00000598422 HSP90AB4PQ58FF6 505 aa17.95■□□□□ 0.46
XRCC1-208ENST00000598422 FAM151AQ8WW52 585 aa17.95■□□□□ 0.46
XRCC1-208ENST00000598422 WRNIP1Q96S55 665 aa17.95■□□□□ 0.46
XRCC1-208ENST00000598422 RAI14Q9P0K7 980 aa17.95■□□□□ 0.46
XRCC1-208ENST00000598422 LRP2BPQ9P2M1 347 aa17.95■□□□□ 0.46
XRCC1-208ENST00000598422 MROH7-TTC4A0A0A0MT08 1334 aa17.95■□□□□ 0.46
XRCC1-208ENST00000598422 ALDH1A1P00352 501 aa17.94■□□□□ 0.46
XRCC1-208ENST00000598422 MCAMP43121 646 aa17.94■□□□□ 0.46
XRCC1-208ENST00000598422 BTDP43251 543 aa17.94■□□□□ 0.46
XRCC1-208ENST00000598422 INHBEP58166 350 aa17.94■□□□□ 0.46
XRCC1-208ENST00000598422 MECOMQ03112 1051 aa17.94■□□□□ 0.46
XRCC1-208ENST00000598422 NFIAQ12857 509 aa17.94■□□□□ 0.46
XRCC1-208ENST00000598422 VGLL4Q14135 290 aa17.94■□□□□ 0.46
XRCC1-208ENST00000598422 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.94■□□□□ 0.46
XRCC1-208ENST00000598422 OPTNQ96CV9 577 aa17.94■□□□□ 0.46
XRCC1-208ENST00000598422 EXOC6BQ9Y2D4 811 aa17.94■□□□□ 0.46
XRCC1-208ENST00000598422 LDHCP07864 332 aa17.93■□□□□ 0.46
XRCC1-208ENST00000598422 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.93■□□□□ 0.46
XRCC1-208ENST00000598422 TBC1D9Q6ZT07 1266 aa17.93■□□□□ 0.46
XRCC1-208ENST00000598422 ZNF341Q9BYN7 854 aa17.93■□□□□ 0.46
XRCC1-208ENST00000598422 TBC1D8O95759 1140 aa17.92■□□□□ 0.46
XRCC1-208ENST00000598422 DGKZQ13574 1117 aa17.92■□□□□ 0.46
XRCC1-208ENST00000598422 OTUD7BQ6GQQ9 843 aa17.92■□□□□ 0.46
XRCC1-208ENST00000598422 ZSCAN29Q8IWY8 852 aaPredicted RBP17.92■□□□□ 0.46
XRCC1-208ENST00000598422 RPAP2Q8IXW5 612 aaPredicted RBP17.92■□□□□ 0.46
XRCC1-208ENST00000598422 FAM163AQ96GL9 167 aaPredicted RBP17.92■□□□□ 0.46
XRCC1-208ENST00000598422 ABHD8Q96I13 439 aa17.92■□□□□ 0.46
XRCC1-208ENST00000598422 NOL10Q9BSC4 688 aaKnown RBP17.92■□□□□ 0.46
XRCC1-208ENST00000598422 CCDC8Q9H0W5 538 aaPredicted RBP17.92■□□□□ 0.46
XRCC1-208ENST00000598422 SNRKQ9NRH2 765 aa17.92■□□□□ 0.46
XRCC1-208ENST00000598422 ZBTB40Q9NUA8 1239 aa17.92■□□□□ 0.46
XRCC1-208ENST00000598422 DBNLQ9UJU6 430 aaKnown RBP17.92■□□□□ 0.46
XRCC1-208ENST00000598422 GJA5P36382 358 aa17.91■□□□□ 0.46
XRCC1-208ENST00000598422 RGS3P49796 1198 aa17.91■□□□□ 0.46
XRCC1-208ENST00000598422 PDE3AQ14432 1141 aa17.91■□□□□ 0.46
XRCC1-208ENST00000598422 MIGA2Q7L4E1 593 aa17.91■□□□□ 0.46
XRCC1-208ENST00000598422 AACSQ86V21 672 aa17.91■□□□□ 0.46
XRCC1-208ENST00000598422 IFNL1Q8IU54 200 aa17.91■□□□□ 0.46
XRCC1-208ENST00000598422 OTUD5Q96G74 571 aa17.91■□□□□ 0.46
XRCC1-208ENST00000598422 IDI2Q9BXS1 227 aa17.91■□□□□ 0.46
XRCC1-208ENST00000598422 TLR7Q9NYK1 1049 aaKnown RBP17.91■□□□□ 0.46
XRCC1-208ENST00000598422 FAM198AQ9UFP1 575 aa17.91■□□□□ 0.46
XRCC1-208ENST00000598422 MYH13Q9UKX3 1938 aa17.91■□□□□ 0.46
XRCC1-208ENST00000598422 ENTPD3O75355 529 aa17.9■□□□□ 0.46
XRCC1-208ENST00000598422 PICALMQ13492 652 aa17.9■□□□□ 0.46
XRCC1-208ENST00000598422 NSUN4Q96CB9 384 aaKnown RBP17.9■□□□□ 0.46
XRCC1-208ENST00000598422 EAF2Q96CJ1 260 aaPredicted RBP17.9■□□□□ 0.46
XRCC1-208ENST00000598422 ZNF512BQ96KM6 892 aaPredicted RBP17.9■□□□□ 0.46
XRCC1-208ENST00000598422 MCOLN1Q9GZU1 580 aa17.9■□□□□ 0.46
XRCC1-208ENST00000598422 GPR75-ASB3A0A0A6YYF3 556 aa17.89■□□□□ 0.45
XRCC1-208ENST00000598422 SPDYE5A6NIY4 337 aa17.89■□□□□ 0.45
XRCC1-208ENST00000598422 APBB1O00213 710 aa17.89■□□□□ 0.45
XRCC1-208ENST00000598422 GTF2A2P52657 109 aa17.89■□□□□ 0.45
XRCC1-208ENST00000598422 NAA16Q6N069 864 aaPredicted RBP17.89■□□□□ 0.45
XRCC1-208ENST00000598422 CNKSR2Q8WXI2 1034 aa17.89■□□□□ 0.45
XRCC1-208ENST00000598422 ZKSCAN4Q969J2 545 aaPredicted RBP17.89■□□□□ 0.45
XRCC1-208ENST00000598422 SNCAIPQ9Y6H5 919 aa17.89■□□□□ 0.45
XRCC1-208ENST00000598422 GPR25O00155 361 aa17.88■□□□□ 0.45
XRCC1-208ENST00000598422 WDHD1O75717 1129 aaPredicted RBP17.88■□□□□ 0.45
XRCC1-208ENST00000598422 C20orf194Q5TEA3 1177 aa17.88■□□□□ 0.45
XRCC1-208ENST00000598422 ERO1BQ86YB8 467 aa17.88■□□□□ 0.45
XRCC1-208ENST00000598422 RHPN1Q8TCX5 695 aa17.88■□□□□ 0.45
XRCC1-208ENST00000598422 ZNF296Q8WUU4 475 aaPredicted RBP17.88■□□□□ 0.45
XRCC1-208ENST00000598422 KIF1BPQ96EK5 621 aa17.88■□□□□ 0.45
XRCC1-208ENST00000598422 BCL11AQ9H165 835 aa17.88■□□□□ 0.45
XRCC1-208ENST00000598422 IL1RAPL2Q9NP60 686 aa17.88■□□□□ 0.45
XRCC1-208ENST00000598422 RFX7Q2KHR2 1363 aa17.88■□□□□ 0.45
XRCC1-208ENST00000598422 CCL15-CCL14A0A0B4J2E2 113 aa17.87■□□□□ 0.45
XRCC1-208ENST00000598422 IGF2BP3O00425 579 aaKnown RBP eCLIP17.87■□□□□ 0.45
XRCC1-208ENST00000598422 BAG3O95817 575 aa17.87■□□□□ 0.45
XRCC1-208ENST00000598422 MAP4K4O95819 1239 aaPredicted RBP17.87■□□□□ 0.45
XRCC1-208ENST00000598422 ZAP70P43403 619 aa17.87■□□□□ 0.45
XRCC1-208ENST00000598422 CCL15Q16663 113 aa17.87■□□□□ 0.45
XRCC1-208ENST00000598422 NOM1Q5C9Z4 860 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms